Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
NAF1Q96HR8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
NAF1Q96HR8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.9■■□□□ 1.74
NAF1Q96HR8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
NAF1Q96HR8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
NAF1Q96HR8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NAF1Q96HR8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NAF1Q96HR8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.87■■□□□ 1.73
NAF1Q96HR8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NAF1Q96HR8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NAF1Q96HR8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
NAF1Q96HR8 MIR4449-201ENST00000578365 66 ntBASIC25.84■■□□□ 1.73
NAF1Q96HR8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.84■■□□□ 1.73
NAF1Q96HR8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.83■■□□□ 1.73
NAF1Q96HR8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
NAF1Q96HR8 WASH5P-204ENST00000632292 975 ntBASIC25.82■■□□□ 1.72
NAF1Q96HR8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NAF1Q96HR8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NAF1Q96HR8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NAF1Q96HR8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
NAF1Q96HR8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.8■■□□□ 1.72
NAF1Q96HR8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NAF1Q96HR8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.79■■□□□ 1.72
NAF1Q96HR8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
NAF1Q96HR8 AC142086.6-201ENST00000621154 1765 ntBASIC25.79■■□□□ 1.72
NAF1Q96HR8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
NAF1Q96HR8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NAF1Q96HR8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NAF1Q96HR8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NAF1Q96HR8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.77■■□□□ 1.72
NAF1Q96HR8 AC021231.2-201ENST00000594613 730 ntBASIC25.77■■□□□ 1.72
NAF1Q96HR8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
NAF1Q96HR8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.76■■□□□ 1.71
NAF1Q96HR8 MIR639-201ENST00000384974 98 ntBASIC25.76■■□□□ 1.71
NAF1Q96HR8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.76■■□□□ 1.71
NAF1Q96HR8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
NAF1Q96HR8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.76■■□□□ 1.71
NAF1Q96HR8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
NAF1Q96HR8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.75■■□□□ 1.71
NAF1Q96HR8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NAF1Q96HR8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NAF1Q96HR8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NAF1Q96HR8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.74■■□□□ 1.71
NAF1Q96HR8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NAF1Q96HR8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
NAF1Q96HR8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.74■■□□□ 1.71
NAF1Q96HR8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
NAF1Q96HR8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
NAF1Q96HR8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.74■■□□□ 1.71
NAF1Q96HR8 AC120057.4-201ENST00000624722 1615 ntBASIC25.74■■□□□ 1.71
NAF1Q96HR8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.73■■□□□ 1.71
NAF1Q96HR8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NAF1Q96HR8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NAF1Q96HR8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NAF1Q96HR8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
NAF1Q96HR8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NAF1Q96HR8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NAF1Q96HR8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NAF1Q96HR8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NAF1Q96HR8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.71■■□□□ 1.71
NAF1Q96HR8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
NAF1Q96HR8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
NAF1Q96HR8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.7■■□□□ 1.7
NAF1Q96HR8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.69■■□□□ 1.7
NAF1Q96HR8 AC016575.1-201ENST00000607026 382 ntBASIC25.69■■□□□ 1.7
NAF1Q96HR8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NAF1Q96HR8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NAF1Q96HR8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NAF1Q96HR8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
NAF1Q96HR8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NAF1Q96HR8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
NAF1Q96HR8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NAF1Q96HR8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.67■■□□□ 1.7
NAF1Q96HR8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
NAF1Q96HR8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NAF1Q96HR8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NAF1Q96HR8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NAF1Q96HR8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NAF1Q96HR8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NAF1Q96HR8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NAF1Q96HR8 HSD17B1P1-201ENST00000590052 955 ntBASIC25.65■■□□□ 1.7
NAF1Q96HR8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.65■■□□□ 1.7
NAF1Q96HR8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.64■■□□□ 1.7
NAF1Q96HR8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NAF1Q96HR8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NAF1Q96HR8 MIR3648-2-201ENST00000581792 180 ntBASIC25.63■■□□□ 1.69
NAF1Q96HR8 MIR3648-1-201ENST00000615959 180 ntBASIC25.63■■□□□ 1.69
NAF1Q96HR8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NAF1Q96HR8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
NAF1Q96HR8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
NAF1Q96HR8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.61■■□□□ 1.69
NAF1Q96HR8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
NAF1Q96HR8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
NAF1Q96HR8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NAF1Q96HR8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
NAF1Q96HR8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.6■■□□□ 1.69
NAF1Q96HR8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.6■■□□□ 1.69
NAF1Q96HR8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NAF1Q96HR8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NAF1Q96HR8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms