Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
C12orf56Q8IXR9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.14
C12orf56Q8IXR9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
C12orf56Q8IXR9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.38■■■□□ 2.13
C12orf56Q8IXR9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.38■■■□□ 2.13
C12orf56Q8IXR9 RPS2P35-201ENST00000443417 897 ntBASIC28.38■■■□□ 2.13
C12orf56Q8IXR9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.37■■■□□ 2.13
C12orf56Q8IXR9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
C12orf56Q8IXR9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
C12orf56Q8IXR9 AP004833.2-201ENST00000532228 1454 ntBASIC28.36■■■□□ 2.13
C12orf56Q8IXR9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.35■■■□□ 2.13
C12orf56Q8IXR9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.35■■■□□ 2.13
C12orf56Q8IXR9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
C12orf56Q8IXR9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
C12orf56Q8IXR9 AC139426.1-201ENST00000568218 2529 ntBASIC28.33■■■□□ 2.13
C12orf56Q8IXR9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
C12orf56Q8IXR9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
C12orf56Q8IXR9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
C12orf56Q8IXR9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.33■■■□□ 2.13
C12orf56Q8IXR9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.33■■■□□ 2.13
C12orf56Q8IXR9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.12
C12orf56Q8IXR9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
C12orf56Q8IXR9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
C12orf56Q8IXR9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.32■■■□□ 2.12
C12orf56Q8IXR9 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
C12orf56Q8IXR9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.32■■■□□ 2.12
C12orf56Q8IXR9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
C12orf56Q8IXR9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
C12orf56Q8IXR9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
C12orf56Q8IXR9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
C12orf56Q8IXR9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
C12orf56Q8IXR9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
C12orf56Q8IXR9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
C12orf56Q8IXR9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.29■■■□□ 2.12
C12orf56Q8IXR9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.29■■■□□ 2.12
C12orf56Q8IXR9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
C12orf56Q8IXR9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
C12orf56Q8IXR9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
C12orf56Q8IXR9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.29■■■□□ 2.12
C12orf56Q8IXR9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.28■■■□□ 2.12
C12orf56Q8IXR9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
C12orf56Q8IXR9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
C12orf56Q8IXR9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
C12orf56Q8IXR9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
C12orf56Q8IXR9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.27■■■□□ 2.12
C12orf56Q8IXR9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
C12orf56Q8IXR9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
C12orf56Q8IXR9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.27■■■□□ 2.12
C12orf56Q8IXR9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
C12orf56Q8IXR9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.26■■■□□ 2.11
C12orf56Q8IXR9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.26■■■□□ 2.11
C12orf56Q8IXR9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
C12orf56Q8IXR9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.24■■■□□ 2.11
C12orf56Q8IXR9 LINC00273-201ENST00000539813 1452 ntBASIC28.23■■■□□ 2.11
C12orf56Q8IXR9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
C12orf56Q8IXR9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
C12orf56Q8IXR9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
C12orf56Q8IXR9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.2■■■□□ 2.1
C12orf56Q8IXR9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
C12orf56Q8IXR9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
C12orf56Q8IXR9 AC135983.2-203ENST00000454486 1613 ntBASIC28.18■■■□□ 2.1
C12orf56Q8IXR9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
C12orf56Q8IXR9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
C12orf56Q8IXR9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
C12orf56Q8IXR9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.17■■■□□ 2.1
C12orf56Q8IXR9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.17■■■□□ 2.1
C12orf56Q8IXR9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
C12orf56Q8IXR9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
C12orf56Q8IXR9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
C12orf56Q8IXR9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.16■■■□□ 2.1
C12orf56Q8IXR9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
C12orf56Q8IXR9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.15■■■□□ 2.1
C12orf56Q8IXR9 AC021231.2-201ENST00000594613 730 ntBASIC28.15■■■□□ 2.1
C12orf56Q8IXR9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
C12orf56Q8IXR9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
C12orf56Q8IXR9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
C12orf56Q8IXR9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
C12orf56Q8IXR9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.13■■■□□ 2.09
C12orf56Q8IXR9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
C12orf56Q8IXR9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
C12orf56Q8IXR9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
C12orf56Q8IXR9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
C12orf56Q8IXR9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
C12orf56Q8IXR9 DUX4L29-201ENST00000425409 679 ntBASIC28.12■■■□□ 2.09
C12orf56Q8IXR9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
C12orf56Q8IXR9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.11■■■□□ 2.09
C12orf56Q8IXR9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
C12orf56Q8IXR9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
C12orf56Q8IXR9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
C12orf56Q8IXR9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
C12orf56Q8IXR9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.1■■■□□ 2.09
C12orf56Q8IXR9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
C12orf56Q8IXR9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
C12orf56Q8IXR9 WHAMMP2-203ENST00000563942 1603 ntBASIC28.1■■■□□ 2.09
C12orf56Q8IXR9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
C12orf56Q8IXR9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.09■■■□□ 2.09
C12orf56Q8IXR9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
C12orf56Q8IXR9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
C12orf56Q8IXR9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
C12orf56Q8IXR9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms