Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 AL135925.1-201ENST00000605920 1701 ntBASIC24.65■■□□□ 1.54
LAPTM4BQ86VI4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
LAPTM4BQ86VI4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
LAPTM4BQ86VI4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
LAPTM4BQ86VI4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
LAPTM4BQ86VI4 ABCB10P3-201ENST00000561950 2166 ntBASIC24.62■■□□□ 1.53
LAPTM4BQ86VI4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LAPTM4BQ86VI4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
LAPTM4BQ86VI4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LAPTM4BQ86VI4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LAPTM4BQ86VI4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.61■■□□□ 1.53
LAPTM4BQ86VI4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.6■■□□□ 1.53
LAPTM4BQ86VI4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LAPTM4BQ86VI4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.59■■□□□ 1.53
LAPTM4BQ86VI4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
LAPTM4BQ86VI4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
LAPTM4BQ86VI4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
LAPTM4BQ86VI4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LAPTM4BQ86VI4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.58■■□□□ 1.53
LAPTM4BQ86VI4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LAPTM4BQ86VI4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
LAPTM4BQ86VI4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LAPTM4BQ86VI4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
LAPTM4BQ86VI4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LAPTM4BQ86VI4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LAPTM4BQ86VI4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
LAPTM4BQ86VI4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
LAPTM4BQ86VI4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.55■■□□□ 1.52
LAPTM4BQ86VI4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.55■■□□□ 1.52
LAPTM4BQ86VI4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
LAPTM4BQ86VI4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
LAPTM4BQ86VI4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
LAPTM4BQ86VI4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LAPTM4BQ86VI4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LAPTM4BQ86VI4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
LAPTM4BQ86VI4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LAPTM4BQ86VI4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
LAPTM4BQ86VI4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
LAPTM4BQ86VI4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
LAPTM4BQ86VI4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LAPTM4BQ86VI4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
LAPTM4BQ86VI4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.51■■□□□ 1.51
LAPTM4BQ86VI4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.51■■□□□ 1.51
LAPTM4BQ86VI4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.51■■□□□ 1.51
LAPTM4BQ86VI4 LINC01971-201ENST00000617888 1048 ntBASIC24.51■■□□□ 1.51
LAPTM4BQ86VI4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
LAPTM4BQ86VI4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LAPTM4BQ86VI4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LAPTM4BQ86VI4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LAPTM4BQ86VI4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.49■■□□□ 1.51
LAPTM4BQ86VI4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.49■■□□□ 1.51
LAPTM4BQ86VI4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LAPTM4BQ86VI4 HLA-V-202ENST00000446817 847 ntBASIC24.48■■□□□ 1.51
LAPTM4BQ86VI4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.48■■□□□ 1.51
LAPTM4BQ86VI4 DUX4L11-201ENST00000611504 1267 ntBASIC24.48■■□□□ 1.51
LAPTM4BQ86VI4 DUX4L12-201ENST00000614593 1267 ntBASIC24.48■■□□□ 1.51
LAPTM4BQ86VI4 DUX4L14-201ENST00000621227 1267 ntBASIC24.48■■□□□ 1.51
LAPTM4BQ86VI4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LAPTM4BQ86VI4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.47■■□□□ 1.51
LAPTM4BQ86VI4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.47■■□□□ 1.51
LAPTM4BQ86VI4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.46■■□□□ 1.51
LAPTM4BQ86VI4 AC127502.1-201ENST00000399971 1502 ntBASIC24.45■■□□□ 1.51
LAPTM4BQ86VI4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
LAPTM4BQ86VI4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.45■■□□□ 1.5
LAPTM4BQ86VI4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.45■■□□□ 1.5
LAPTM4BQ86VI4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LAPTM4BQ86VI4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
LAPTM4BQ86VI4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
LAPTM4BQ86VI4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LAPTM4BQ86VI4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.43■■□□□ 1.5
LAPTM4BQ86VI4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
LAPTM4BQ86VI4 ST7-AS1-201ENST00000456775 1889 ntBASIC24.43■■□□□ 1.5
LAPTM4BQ86VI4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LAPTM4BQ86VI4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.43■■□□□ 1.5
LAPTM4BQ86VI4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.43■■□□□ 1.5
LAPTM4BQ86VI4 MIR3648-2-201ENST00000581792 180 ntBASIC24.43■■□□□ 1.5
LAPTM4BQ86VI4 MIR3648-1-201ENST00000615959 180 ntBASIC24.43■■□□□ 1.5
LAPTM4BQ86VI4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LAPTM4BQ86VI4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
LAPTM4BQ86VI4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.42■■□□□ 1.5
LAPTM4BQ86VI4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.42■■□□□ 1.5
LAPTM4BQ86VI4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.42■■□□□ 1.5
LAPTM4BQ86VI4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
LAPTM4BQ86VI4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
LAPTM4BQ86VI4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LAPTM4BQ86VI4 LINC00273-201ENST00000539813 1452 ntBASIC24.41■■□□□ 1.5
LAPTM4BQ86VI4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
LAPTM4BQ86VI4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.41■■□□□ 1.5
LAPTM4BQ86VI4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.41■■□□□ 1.5
LAPTM4BQ86VI4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LAPTM4BQ86VI4 AC016575.1-201ENST00000607026 382 ntBASIC24.4■■□□□ 1.5
LAPTM4BQ86VI4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
LAPTM4BQ86VI4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
LAPTM4BQ86VI4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
LAPTM4BQ86VI4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.39■■□□□ 1.49
LAPTM4BQ86VI4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
LAPTM4BQ86VI4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.39■■□□□ 1.49
LAPTM4BQ86VI4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.38■■□□□ 1.49
LAPTM4BQ86VI4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LAPTM4BQ86VI4 CR559946.2-201ENST00000623684 991 ntBASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms