Protein–RNA interactions for Protein: Q6P996

PDXDC1, Pyridoxal-dependent decarboxylase domain-containing protein 1, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1Q6P996 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.59■■■□□ 2.17
PDXDC1Q6P996 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.59■■■□□ 2.17
PDXDC1Q6P996 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PDXDC1Q6P996 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PDXDC1Q6P996 AC108673.1-201ENST00000510422 1159 ntBASIC28.58■■■□□ 2.17
PDXDC1Q6P996 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PDXDC1Q6P996 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PDXDC1Q6P996 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
PDXDC1Q6P996 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.56■■■□□ 2.16
PDXDC1Q6P996 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
PDXDC1Q6P996 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
PDXDC1Q6P996 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PDXDC1Q6P996 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PDXDC1Q6P996 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PDXDC1Q6P996 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
PDXDC1Q6P996 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.53■■■□□ 2.16
PDXDC1Q6P996 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PDXDC1Q6P996 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.52■■■□□ 2.16
PDXDC1Q6P996 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PDXDC1Q6P996 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PDXDC1Q6P996 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.5■■■□□ 2.15
PDXDC1Q6P996 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PDXDC1Q6P996 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.49■■■□□ 2.15
PDXDC1Q6P996 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PDXDC1Q6P996 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PDXDC1Q6P996 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PDXDC1Q6P996 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PDXDC1Q6P996 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PDXDC1Q6P996 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PDXDC1Q6P996 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PDXDC1Q6P996 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PDXDC1Q6P996 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
PDXDC1Q6P996 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
PDXDC1Q6P996 HLA-V-202ENST00000446817 847 ntBASIC28.46■■■□□ 2.15
PDXDC1Q6P996 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PDXDC1Q6P996 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
PDXDC1Q6P996 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
PDXDC1Q6P996 AC021231.2-201ENST00000594613 730 ntBASIC28.45■■■□□ 2.14
PDXDC1Q6P996 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PDXDC1Q6P996 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PDXDC1Q6P996 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
PDXDC1Q6P996 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
PDXDC1Q6P996 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PDXDC1Q6P996 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PDXDC1Q6P996 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
PDXDC1Q6P996 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PDXDC1Q6P996 MIR6090-201ENST00000622481 60 ntBASIC28.42■■■□□ 2.14
PDXDC1Q6P996 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
PDXDC1Q6P996 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
PDXDC1Q6P996 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.41■■■□□ 2.14
PDXDC1Q6P996 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.41■■■□□ 2.14
PDXDC1Q6P996 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PDXDC1Q6P996 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
PDXDC1Q6P996 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
PDXDC1Q6P996 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.4■■■□□ 2.14
PDXDC1Q6P996 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PDXDC1Q6P996 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PDXDC1Q6P996 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PDXDC1Q6P996 AL139393.2-201ENST00000608721 2025 ntBASIC28.38■■■□□ 2.13
PDXDC1Q6P996 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
PDXDC1Q6P996 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.37■■■□□ 2.13
PDXDC1Q6P996 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PDXDC1Q6P996 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
PDXDC1Q6P996 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PDXDC1Q6P996 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PDXDC1Q6P996 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PDXDC1Q6P996 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.36■■■□□ 2.13
PDXDC1Q6P996 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
PDXDC1Q6P996 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PDXDC1Q6P996 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
PDXDC1Q6P996 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PDXDC1Q6P996 AC010864.1-201ENST00000609407 1511 ntBASIC28.34■■■□□ 2.13
PDXDC1Q6P996 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PDXDC1Q6P996 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PDXDC1Q6P996 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.33■■■□□ 2.13
PDXDC1Q6P996 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
PDXDC1Q6P996 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PDXDC1Q6P996 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
PDXDC1Q6P996 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.32■■■□□ 2.12
PDXDC1Q6P996 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PDXDC1Q6P996 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
PDXDC1Q6P996 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.32■■■□□ 2.12
PDXDC1Q6P996 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PDXDC1Q6P996 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PDXDC1Q6P996 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.3■■■□□ 2.12
PDXDC1Q6P996 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PDXDC1Q6P996 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDXDC1Q6P996 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDXDC1Q6P996 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.28■■■□□ 2.12
PDXDC1Q6P996 AC142086.6-201ENST00000621154 1765 ntBASIC28.28■■■□□ 2.12
PDXDC1Q6P996 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.27■■■□□ 2.12
PDXDC1Q6P996 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.27■■■□□ 2.12
PDXDC1Q6P996 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.27■■■□□ 2.12
PDXDC1Q6P996 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
PDXDC1Q6P996 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
PDXDC1Q6P996 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
PDXDC1Q6P996 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PDXDC1Q6P996 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PDXDC1Q6P996 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PDXDC1Q6P996 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms