Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.68■□□□□ 0.26
HSPG2P98160 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HSPG2P98160 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.67■□□□□ 0.26
HSPG2P98160 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HSPG2P98160 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HSPG2P98160 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HSPG2P98160 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HSPG2P98160 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HSPG2P98160 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.66■□□□□ 0.26
HSPG2P98160 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HSPG2P98160 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HSPG2P98160 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HSPG2P98160 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HSPG2P98160 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HSPG2P98160 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
HSPG2P98160 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.65■□□□□ 0.26
HSPG2P98160 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.65■□□□□ 0.26
HSPG2P98160 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HSPG2P98160 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.64■□□□□ 0.25
HSPG2P98160 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HSPG2P98160 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.63■□□□□ 0.25
HSPG2P98160 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HSPG2P98160 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.63■□□□□ 0.25
HSPG2P98160 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HSPG2P98160 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HSPG2P98160 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.62■□□□□ 0.25
HSPG2P98160 AC022413.1-201ENST00000624602 984 ntBASIC16.62■□□□□ 0.25
HSPG2P98160 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC16.62■□□□□ 0.25
HSPG2P98160 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HSPG2P98160 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HSPG2P98160 KRT18P60-201ENST00000312876 1297 ntBASIC16.6■□□□□ 0.25
HSPG2P98160 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
HSPG2P98160 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
HSPG2P98160 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.6■□□□□ 0.25
HSPG2P98160 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HSPG2P98160 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HSPG2P98160 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.59■□□□□ 0.25
HSPG2P98160 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.59■□□□□ 0.25
HSPG2P98160 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC16.58■□□□□ 0.25
HSPG2P98160 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
HSPG2P98160 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HSPG2P98160 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
HSPG2P98160 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.58■□□□□ 0.24
HSPG2P98160 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HSPG2P98160 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HSPG2P98160 LINC00273-201ENST00000539813 1452 ntBASIC16.57■□□□□ 0.24
HSPG2P98160 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HSPG2P98160 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.57■□□□□ 0.24
HSPG2P98160 EI24-212ENST00000615917 1407 ntTSL 2 BASIC16.57■□□□□ 0.24
HSPG2P98160 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HSPG2P98160 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HSPG2P98160 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HSPG2P98160 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HSPG2P98160 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HSPG2P98160 AC060814.1-201ENST00000554326 538 ntBASIC16.56■□□□□ 0.24
HSPG2P98160 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HSPG2P98160 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HSPG2P98160 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.55■□□□□ 0.24
HSPG2P98160 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.54■□□□□ 0.24
HSPG2P98160 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HSPG2P98160 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.53■□□□□ 0.24
HSPG2P98160 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HSPG2P98160 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.53■□□□□ 0.24
HSPG2P98160 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HSPG2P98160 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HSPG2P98160 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HSPG2P98160 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.52■□□□□ 0.24
HSPG2P98160 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HSPG2P98160 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.52■□□□□ 0.23
HSPG2P98160 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HSPG2P98160 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
HSPG2P98160 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.52■□□□□ 0.23
HSPG2P98160 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.51■□□□□ 0.23
HSPG2P98160 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HSPG2P98160 MIR935-201ENST00000401179 91 ntBASIC16.51■□□□□ 0.23
HSPG2P98160 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.5■□□□□ 0.23
HSPG2P98160 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HSPG2P98160 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HSPG2P98160 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.49■□□□□ 0.23
HSPG2P98160 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HSPG2P98160 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HSPG2P98160 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC16.48■□□□□ 0.23
HSPG2P98160 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HSPG2P98160 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HSPG2P98160 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HSPG2P98160 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HSPG2P98160 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
HSPG2P98160 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.47■□□□□ 0.23
HSPG2P98160 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HSPG2P98160 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.47■□□□□ 0.23
HSPG2P98160 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HSPG2P98160 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HSPG2P98160 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HSPG2P98160 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC16.46■□□□□ 0.23
HSPG2P98160 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC16.46■□□□□ 0.23
HSPG2P98160 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
HSPG2P98160 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HSPG2P98160 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HSPG2P98160 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC16.44■□□□□ 0.22
HSPG2P98160 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms