RNA–Protein interactions for RNA: ENST00000233893.9

HSPE1-201, Transcript of heat shock protein family E (Hsp10) member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPE1, Length 950 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPE1-201ENST00000233893 NISCHQ9Y2I1 1504 aa59.15■■■■■ 7.06
HSPE1-201ENST00000233893 CCDC180Q9P1Z9 1646 aa53.17■■■■■ 6.1
HSPE1-201ENST00000233893 ABCC9O60706 1549 aa52.86■■■■■ 6.05
HSPE1-201ENST00000233893 RB1CC1Q8TDY2 1594 aa50.41■■■■■ 5.66
HSPE1-201ENST00000233893 NACADO15069 1562 aa50.09■■■■■ 5.61
HSPE1-201ENST00000233893 UNC13AQ9UPW8 1703 aa49.57■■■■■ 5.53
HSPE1-201ENST00000233893 DCAF8L2P0C7V8 631 aa49.53■■■■■ 5.52
HSPE1-201ENST00000233893 MYO15BQ96JP2 1530 aa49.46■■■■■ 5.51
HSPE1-201ENST00000233893 DNAJC5BQ9UF47 199 aa49.45■■■■■ 5.51
HSPE1-201ENST00000233893 PABPN1Q86U42 306 aaKnown RBP eCLIP49.11■■■■■ 5.45
HSPE1-201ENST00000233893 ZCCHC6Q5VYS8 1495 aaKnown RBP49.11■■■■■ 5.45
HSPE1-201ENST00000233893 BICRAQ9NZM4 1560 aa49.08■■■■■ 5.45
HSPE1-201ENST00000233893 DCAF1Q9Y4B6 1507 aa48.88■■■■■ 5.42
HSPE1-201ENST00000233893 SCRIBQ14160 1630 aa48.39■■■■■ 5.34
HSPE1-201ENST00000233893 SHROOM4Q9ULL8 1493 aa48.3■■■■■ 5.32
HSPE1-201ENST00000233893 CC2D2AQ9P2K1 1620 aa47.86■■■■■ 5.25
HSPE1-201ENST00000233893 EIF4G1Q04637 1599 aaKnown RBP47.79■■■■■ 5.24
HSPE1-201ENST00000233893 CECR2Q9BXF3 1484 aa47.59■■■■■ 5.21
HSPE1-201ENST00000233893 NCAPD3P42695 1498 aa46.2■■■■■ 4.99
HSPE1-201ENST00000233893 SMARCA4P51532 1647 aa46.2■■■■■ 4.99
HSPE1-201ENST00000233893 ATAD2BQ9ULI0 1458 aa46.11■■■■■ 4.97
HSPE1-201ENST00000233893 SMARCA2P51531 1590 aa45.98■■■■■ 4.95
HSPE1-201ENST00000233893 HMGXB3Q12766 1538 aa45.97■■■■■ 4.95
HSPE1-201ENST00000233893 BAZ1AQ9NRL2 1556 aaPredicted RBP45.89■■■■■ 4.94
HSPE1-201ENST00000233893 PEG3Q9GZU2 1588 aa45.75■■■■■ 4.92
HSPE1-201ENST00000233893 BAZ1BQ9UIG0 1483 aaKnown RBP45.64■■■■■ 4.9
HSPE1-201ENST00000233893 MROH2BQ7Z745 1585 aa45.62■■■■■ 4.89
HSPE1-201ENST00000233893 ERCC6Q03468 1493 aa45.55■■■■■ 4.88
HSPE1-201ENST00000233893 NESP48681 1621 aa45.52■■■■■ 4.88
HSPE1-201ENST00000233893 CUX2O14529 1486 aa45.5■■■■■ 4.87
HSPE1-201ENST00000233893 DNAJC5Q9H3Z4 198 aa45.21■■■■■ 4.83
HSPE1-201ENST00000233893 LAMC3Q9Y6N6 1575 aa45.2■■■■■ 4.83
HSPE1-201ENST00000233893 THOC2Q8NI27 1593 aaKnown RBP45.16■■■■■ 4.82
HSPE1-201ENST00000233893 WIZO95785 1651 aa45.14■■■■■ 4.82
HSPE1-201ENST00000233893 KIF21AQ7Z4S6 1674 aa45.08■■■■■ 4.81
HSPE1-201ENST00000233893 PDS5BQ9NTI5 1447 aa44.78■■■■■ 4.76
HSPE1-201ENST00000233893 CADPSQ9ULU8 1353 aa44.74■■■■■ 4.75
HSPE1-201ENST00000233893 RSF1Q96T23 1441 aaPredicted RBP44.64■■■■■ 4.74
HSPE1-201ENST00000233893 TOP2AP11388 1531 aaKnown RBP44.51■■■■■ 4.72
HSPE1-201ENST00000233893 MRC2Q9UBG0 1479 aa44.5■■■■■ 4.71
HSPE1-201ENST00000233893 WDR62O43379 1518 aa44.47■■■■■ 4.71
HSPE1-201ENST00000233893 CFTRP13569 1480 aa44.34■■■■■ 4.69
HSPE1-201ENST00000233893 CEP164Q9UPV0 1460 aa44.34■■■■■ 4.69
HSPE1-201ENST00000233893 FANCD2Q9BXW9 1451 aa44.29■■■■■ 4.68
HSPE1-201ENST00000233893 PRDM2Q13029 1718 aa44.18■■■■■ 4.66
HSPE1-201ENST00000233893 URB2Q14146 1524 aaKnown RBP44.01■■■■■ 4.64
HSPE1-201ENST00000233893 CCDC88BA6NC98 1476 aa43.94■■■■■ 4.62
HSPE1-201ENST00000233893 TOPBP1Q92547 1522 aa43.52■■■■■ 4.56
HSPE1-201ENST00000233893 IFT140Q96RY7 1462 aa43.42■■■■■ 4.54
HSPE1-201ENST00000233893 ZNF608Q9ULD9 1512 aaPredicted RBP43.42■■■■■ 4.54
HSPE1-201ENST00000233893 DNMBPQ6XZF7 1577 aa43.4■■■■■ 4.54
HSPE1-201ENST00000233893 ABCC8Q09428 1581 aa43.32■■■■■ 4.52
HSPE1-201ENST00000233893 EIF4G3O43432 1585 aaKnown RBP43.28■■■■■ 4.52
HSPE1-201ENST00000233893 OSCARQ8IYS5 282 aa43.24■■■■■ 4.51
HSPE1-201ENST00000233893 TRIM41Q8WV44 630 aa43.23■■■■■ 4.51
HSPE1-201ENST00000233893 TARBP1Q13395 1621 aaKnown RBP43.22■■■■■ 4.51
HSPE1-201ENST00000233893 POLA1P09884 1462 aaPredicted RBP43.09■■■■■ 4.49
HSPE1-201ENST00000233893 RIMBP3CA6NJZ7 1639 aa42.99■■■■■ 4.47
HSPE1-201ENST00000233893 RIMBP3BA6NNM3 1639 aa42.99■■■■■ 4.47
HSPE1-201ENST00000233893 RIMBP3Q9UFD9 1639 aa42.99■■■■■ 4.47
HSPE1-201ENST00000233893 CHD1O14646 1710 aa42.99■■■■■ 4.47
HSPE1-201ENST00000233893 AQRO60306 1485 aaKnown RBP eCLIP42.96■■■■■ 4.471e-7■■■■■ 43.8
HSPE1-201ENST00000233893 RAD54L2Q9Y4B4 1467 aa42.9■■■■■ 4.46
HSPE1-201ENST00000233893 CUX1P39880 1505 aa42.87■■■■■ 4.45
HSPE1-201ENST00000233893 FGD5Q6ZNL6 1462 aa42.82■■■■■ 4.45
HSPE1-201ENST00000233893 ARHGEF11O15085 1522 aa42.81■■■■■ 4.44
HSPE1-201ENST00000233893 SOGA1O94964 1423 aa42.76■■■■■ 4.44
HSPE1-201ENST00000233893 WDR97A6NE52 1622 aa42.73■■■■■ 4.43
HSPE1-201ENST00000233893 TDRD9Q8NDG6 1382 aaKnown RBP42.67■■■■■ 4.42
HSPE1-201ENST00000233893 SNAPC4Q5SXM2 1469 aa42.58■■■■■ 4.41
HSPE1-201ENST00000233893 SUPT5HO00267 1087 aaKnown RBP42.55■■■■■ 4.4
HSPE1-201ENST00000233893 PBRM1Q86U86 1689 aa42.51■■■■■ 4.39
HSPE1-201ENST00000233893 FBLN2P98095 1184 aa42.46■■■■■ 4.39
HSPE1-201ENST00000233893 MAGI1Q96QZ7 1491 aaPredicted RBP42.44■■■■■ 4.38
HSPE1-201ENST00000233893 CLASP1Q7Z460 1538 aa42.43■■■■■ 4.38
HSPE1-201ENST00000233893 GRIN2BQ13224 1484 aa42.43■■■■■ 4.38
HSPE1-201ENST00000233893 ARAP1Q96P48 1450 aa42.41■■■■■ 4.38
HSPE1-201ENST00000233893 ABCA5Q8WWZ7 1642 aa42.39■■■■■ 4.38
HSPE1-201ENST00000233893 ABCA10Q8WWZ4 1543 aa42.34■■■■■ 4.37
HSPE1-201ENST00000233893 SYNJ1O43426 1573 aa42.31■■■■■ 4.36
HSPE1-201ENST00000233893 SYNJ2O15056 1496 aa42.3■■■■■ 4.36
HSPE1-201ENST00000233893 GAPVD1Q14C86 1478 aa42.3■■■■■ 4.36
HSPE1-201ENST00000233893 BIVM-ERCC5R4GMW8 1640 aa42.28■■■■■ 4.36
HSPE1-201ENST00000233893 CYB5RLQ6IPT4 315 aa42.25■■■■■ 4.35
HSPE1-201ENST00000233893 TOP2BQ02880 1626 aa42.21■■■■■ 4.35
HSPE1-201ENST00000233893 CHMP7Q8WUX9 453 aaPredicted RBP42.18■■■■■ 4.34
HSPE1-201ENST00000233893 WRNQ14191 1432 aaPredicted RBP eCLIP42.07■■■■■ 4.33
HSPE1-201ENST00000233893 ADAMTS12P58397 1594 aa42.05■■■■■ 4.32
HSPE1-201ENST00000233893 GRIN2AQ12879 1464 aa41.94■■■■■ 4.3
HSPE1-201ENST00000233893 CEP170Q5SW79 1584 aa41.88■■■■■ 4.29
HSPE1-201ENST00000233893 ERICH3Q5RHP9 1530 aa41.82■■■■■ 4.29
HSPE1-201ENST00000233893 NUP160Q12769 1436 aa41.8■■■■■ 4.28
HSPE1-201ENST00000233893 ERCC6L2Q5T890 1561 aa41.8■■■■■ 4.28
HSPE1-201ENST00000233893 FHAD1B1AJZ9 1412 aa41.75■■■■■ 4.27
HSPE1-201ENST00000233893 SHROOM2Q13796 1616 aa41.73■■■■■ 4.27
HSPE1-201ENST00000233893 TRHP20396 242 aaPredicted RBP41.67■■■■■ 4.26
HSPE1-201ENST00000233893 RUSC2Q8N2Y8 1516 aa41.47■■■■■ 4.23
HSPE1-201ENST00000233893 CUL7Q14999 1698 aa41.29■■■■■ 4.2
HSPE1-201ENST00000233893 PRG4Q92954 1404 aaPredicted RBP41.29■■■■■ 4.2
HSPE1-201ENST00000233893 KIF27Q86VH2 1401 aa41.21■■■■■ 4.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms