RNA–Protein interactions for RNA: ENST00000555938.1

AC011448.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC011448.1, Length 1,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011448.1-201ENST00000555938 NISCHQ9Y2I1 1504 aa59.13■■■■■ 7.06
AC011448.1-201ENST00000555938 CCDC180Q9P1Z9 1646 aa52.95■■■■■ 6.07
AC011448.1-201ENST00000555938 ABCC9O60706 1549 aa52.95■■■■■ 6.07
AC011448.1-201ENST00000555938 RB1CC1Q8TDY2 1594 aa50.37■■■■■ 5.65
AC011448.1-201ENST00000555938 NACADO15069 1562 aa50.05■■■■■ 5.6
AC011448.1-201ENST00000555938 DCAF8L2P0C7V8 631 aa49.89■■■■■ 5.58
AC011448.1-201ENST00000555938 DNAJC5BQ9UF47 199 aa49.64■■■■■ 5.54
AC011448.1-201ENST00000555938 MYO15BQ96JP2 1530 aa49.39■■■■■ 5.5
AC011448.1-201ENST00000555938 PABPN1Q86U42 306 aaKnown RBP eCLIP49.35■■■■■ 5.492e-14■■■■■ 26.8
AC011448.1-201ENST00000555938 UNC13AQ9UPW8 1703 aa49.28■■■■■ 5.48
AC011448.1-201ENST00000555938 ZCCHC6Q5VYS8 1495 aaKnown RBP49.04■■■■■ 5.44
AC011448.1-201ENST00000555938 BICRAQ9NZM4 1560 aa48.98■■■■■ 5.43
AC011448.1-201ENST00000555938 DCAF1Q9Y4B6 1507 aa48.8■■■■■ 5.4
AC011448.1-201ENST00000555938 SCRIBQ14160 1630 aa48.33■■■■■ 5.33
AC011448.1-201ENST00000555938 SHROOM4Q9ULL8 1493 aa48.21■■■■■ 5.31
AC011448.1-201ENST00000555938 CC2D2AQ9P2K1 1620 aa47.81■■■■■ 5.24
AC011448.1-201ENST00000555938 EIF4G1Q04637 1599 aaKnown RBP47.73■■■■■ 5.23
AC011448.1-201ENST00000555938 CECR2Q9BXF3 1484 aa47.65■■■■■ 5.22
AC011448.1-201ENST00000555938 NCAPD3P42695 1498 aa46.24■■■■■ 4.99
AC011448.1-201ENST00000555938 ATAD2BQ9ULI0 1458 aa46.13■■■■■ 4.98
AC011448.1-201ENST00000555938 SMARCA4P51532 1647 aa46.1■■■■■ 4.97
AC011448.1-201ENST00000555938 SMARCA2P51531 1590 aa45.96■■■■■ 4.95
AC011448.1-201ENST00000555938 HMGXB3Q12766 1538 aa45.88■■■■■ 4.94
AC011448.1-201ENST00000555938 BAZ1AQ9NRL2 1556 aaPredicted RBP45.85■■■■■ 4.93
AC011448.1-201ENST00000555938 BAZ1BQ9UIG0 1483 aaKnown RBP45.67■■■■■ 4.9
AC011448.1-201ENST00000555938 DNAJC5Q9H3Z4 198 aa45.66■■■■■ 4.9
AC011448.1-201ENST00000555938 ERCC6Q03468 1493 aa45.66■■■■■ 4.9
AC011448.1-201ENST00000555938 PEG3Q9GZU2 1588 aa45.63■■■■■ 4.9
AC011448.1-201ENST00000555938 MROH2BQ7Z745 1585 aa45.61■■■■■ 4.89
AC011448.1-201ENST00000555938 CUX2O14529 1486 aa45.55■■■■■ 4.88
AC011448.1-201ENST00000555938 NESP48681 1621 aa45.54■■■■■ 4.88
AC011448.1-201ENST00000555938 LAMC3Q9Y6N6 1575 aa45.15■■■■■ 4.82
AC011448.1-201ENST00000555938 WIZO95785 1651 aa45.06■■■■■ 4.8
AC011448.1-201ENST00000555938 THOC2Q8NI27 1593 aaKnown RBP45.01■■■■■ 4.8
AC011448.1-201ENST00000555938 KIF21AQ7Z4S6 1674 aa44.91■■■■■ 4.78
AC011448.1-201ENST00000555938 PDS5BQ9NTI5 1447 aa44.88■■■■■ 4.78
AC011448.1-201ENST00000555938 CADPSQ9ULU8 1353 aa44.84■■■■■ 4.77
AC011448.1-201ENST00000555938 RSF1Q96T23 1441 aaPredicted RBP44.69■■■■■ 4.75
AC011448.1-201ENST00000555938 MRC2Q9UBG0 1479 aa44.52■■■■■ 4.72
AC011448.1-201ENST00000555938 TOP2AP11388 1531 aaKnown RBP44.46■■■■■ 4.71
AC011448.1-201ENST00000555938 WDR62O43379 1518 aa44.41■■■■■ 4.7
AC011448.1-201ENST00000555938 CFTRP13569 1480 aa44.36■■■■■ 4.69
AC011448.1-201ENST00000555938 CEP164Q9UPV0 1460 aa44.36■■■■■ 4.69
AC011448.1-201ENST00000555938 FANCD2Q9BXW9 1451 aa44.34■■■■■ 4.69
AC011448.1-201ENST00000555938 URB2Q14146 1524 aaKnown RBP44■■■■■ 4.63
AC011448.1-201ENST00000555938 CCDC88BA6NC98 1476 aa43.99■■■■■ 4.63
AC011448.1-201ENST00000555938 PRDM2Q13029 1718 aa43.87■■■■■ 4.61
AC011448.1-201ENST00000555938 TOPBP1Q92547 1522 aa43.53■■■■■ 4.56
AC011448.1-201ENST00000555938 TRIM41Q8WV44 630 aa43.49■■■■■ 4.55
AC011448.1-201ENST00000555938 OSCARQ8IYS5 282 aa43.48■■■■■ 4.55
AC011448.1-201ENST00000555938 IFT140Q96RY7 1462 aa43.46■■■■■ 4.55
AC011448.1-201ENST00000555938 ZNF608Q9ULD9 1512 aaPredicted RBP43.45■■■■■ 4.55
AC011448.1-201ENST00000555938 ABCC8Q09428 1581 aa43.36■■■■■ 4.53
AC011448.1-201ENST00000555938 DNMBPQ6XZF7 1577 aa43.35■■■■■ 4.53
AC011448.1-201ENST00000555938 EIF4G3O43432 1585 aaKnown RBP43.17■■■■■ 4.5
AC011448.1-201ENST00000555938 TARBP1Q13395 1621 aaKnown RBP43.13■■■■■ 4.49
AC011448.1-201ENST00000555938 POLA1P09884 1462 aaPredicted RBP43.09■■■■■ 4.49
AC011448.1-201ENST00000555938 AQRO60306 1485 aaKnown RBP eCLIP43.06■■■■■ 4.481e-8■■■□□ 15.2
AC011448.1-201ENST00000555938 RAD54L2Q9Y4B4 1467 aa42.96■■■■■ 4.47
AC011448.1-201ENST00000555938 RIMBP3CA6NJZ7 1639 aa42.94■■■■■ 4.46
AC011448.1-201ENST00000555938 RIMBP3BA6NNM3 1639 aa42.94■■■■■ 4.46
AC011448.1-201ENST00000555938 RIMBP3Q9UFD9 1639 aa42.94■■■■■ 4.46
AC011448.1-201ENST00000555938 SOGA1O94964 1423 aa42.88■■■■■ 4.46
AC011448.1-201ENST00000555938 CUX1P39880 1505 aa42.84■■■■■ 4.45
AC011448.1-201ENST00000555938 FGD5Q6ZNL6 1462 aa42.84■■■■■ 4.45
AC011448.1-201ENST00000555938 CHD1O14646 1710 aa42.83■■■■■ 4.45
AC011448.1-201ENST00000555938 TDRD9Q8NDG6 1382 aaKnown RBP42.82■■■■■ 4.45
AC011448.1-201ENST00000555938 SUPT5HO00267 1087 aaKnown RBP42.82■■■■■ 4.45
AC011448.1-201ENST00000555938 ARHGEF11O15085 1522 aa42.8■■■■■ 4.44
AC011448.1-201ENST00000555938 FBLN2P98095 1184 aa42.74■■■■■ 4.43
AC011448.1-201ENST00000555938 SNAPC4Q5SXM2 1469 aa42.62■■■■■ 4.41
AC011448.1-201ENST00000555938 WDR97A6NE52 1622 aa42.61■■■■■ 4.41
AC011448.1-201ENST00000555938 CYB5RLQ6IPT4 315 aa42.5■■■■■ 4.39
AC011448.1-201ENST00000555938 GRIN2BQ13224 1484 aa42.49■■■■■ 4.39
AC011448.1-201ENST00000555938 MAGI1Q96QZ7 1491 aaPredicted RBP42.46■■■■■ 4.39
AC011448.1-201ENST00000555938 CHMP7Q8WUX9 453 aaPredicted RBP42.42■■■■■ 4.38
AC011448.1-201ENST00000555938 ARAP1Q96P48 1450 aa42.41■■■■■ 4.38
AC011448.1-201ENST00000555938 GAPVD1Q14C86 1478 aa42.36■■■■■ 4.37
AC011448.1-201ENST00000555938 CLASP1Q7Z460 1538 aa42.35■■■■■ 4.37
AC011448.1-201ENST00000555938 ABCA10Q8WWZ4 1543 aa42.34■■■■■ 4.37
AC011448.1-201ENST00000555938 SYNJ2O15056 1496 aa42.33■■■■■ 4.37
AC011448.1-201ENST00000555938 PBRM1Q86U86 1689 aa42.31■■■■■ 4.36
AC011448.1-201ENST00000555938 SYNJ1O43426 1573 aa42.29■■■■■ 4.36
AC011448.1-201ENST00000555938 ABCA5Q8WWZ7 1642 aa42.28■■■■■ 4.36
AC011448.1-201ENST00000555938 WRNQ14191 1432 aaPredicted RBP eCLIP42.17■■■■■ 4.34
AC011448.1-201ENST00000555938 TOP2BQ02880 1626 aa42.13■■■■■ 4.34
AC011448.1-201ENST00000555938 BIVM-ERCC5R4GMW8 1640 aa42.13■■■■■ 4.34
AC011448.1-201ENST00000555938 TRHP20396 242 aaPredicted RBP41.96■■■■■ 4.31
AC011448.1-201ENST00000555938 GRIN2AQ12879 1464 aa41.95■■■■■ 4.31
AC011448.1-201ENST00000555938 ADAMTS12P58397 1594 aa41.94■■■■■ 4.3
AC011448.1-201ENST00000555938 FHAD1B1AJZ9 1412 aa41.82■■■■■ 4.29
AC011448.1-201ENST00000555938 CEP170Q5SW79 1584 aa41.82■■■■■ 4.29
AC011448.1-201ENST00000555938 NUP160Q12769 1436 aa41.81■■■■■ 4.28
AC011448.1-201ENST00000555938 ERICH3Q5RHP9 1530 aa41.79■■■■■ 4.28
AC011448.1-201ENST00000555938 ERCC6L2Q5T890 1561 aa41.76■■■■■ 4.28
AC011448.1-201ENST00000555938 SHROOM2Q13796 1616 aa41.6■■■■■ 4.25
AC011448.1-201ENST00000555938 PRG4Q92954 1404 aaPredicted RBP41.41■■■■■ 4.22
AC011448.1-201ENST00000555938 JPH4Q96JJ6 628 aa41.39■■■■■ 4.22
AC011448.1-201ENST00000555938 RUSC2Q8N2Y8 1516 aa41.35■■■■■ 4.21
AC011448.1-201ENST00000555938 IGF1RP08069 1367 aa41.33■■■■■ 4.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms