Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
GABREP78334 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
GABREP78334 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
GABREP78334 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.96■■□□□ 1.59
GABREP78334 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.96■■□□□ 1.59
GABREP78334 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.96■■□□□ 1.59
GABREP78334 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
GABREP78334 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
GABREP78334 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
GABREP78334 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
GABREP78334 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
GABREP78334 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.93■■□□□ 1.58
GABREP78334 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.93■■□□□ 1.58
GABREP78334 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
GABREP78334 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
GABREP78334 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.91■■□□□ 1.58
GABREP78334 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
GABREP78334 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
GABREP78334 LINC00273-201ENST00000539813 1452 ntBASIC24.9■■□□□ 1.58
GABREP78334 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
GABREP78334 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
GABREP78334 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
GABREP78334 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
GABREP78334 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
GABREP78334 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
GABREP78334 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.57
GABREP78334 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
GABREP78334 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
GABREP78334 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
GABREP78334 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
GABREP78334 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
GABREP78334 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.86■■□□□ 1.57
GABREP78334 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
GABREP78334 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
GABREP78334 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
GABREP78334 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.85■■□□□ 1.57
GABREP78334 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.85■■□□□ 1.57
GABREP78334 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
GABREP78334 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
GABREP78334 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.83■■□□□ 1.57
GABREP78334 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
GABREP78334 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.82■■□□□ 1.56
GABREP78334 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
GABREP78334 AC022413.1-201ENST00000624602 984 ntBASIC24.82■■□□□ 1.56
GABREP78334 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
GABREP78334 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
GABREP78334 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
GABREP78334 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
GABREP78334 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
GABREP78334 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
GABREP78334 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.79■■□□□ 1.56
GABREP78334 NTF6A-201ENST00000591175 560 ntBASIC24.79■■□□□ 1.56
GABREP78334 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
GABREP78334 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.79■■□□□ 1.56
GABREP78334 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
GABREP78334 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.78■■□□□ 1.56
GABREP78334 AL161658.1-201ENST00000623641 1967 ntBASIC24.78■■□□□ 1.56
GABREP78334 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
GABREP78334 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
GABREP78334 AC012354.3-201ENST00000623734 483 ntBASIC24.77■■□□□ 1.56
GABREP78334 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
GABREP78334 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
GABREP78334 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.76■■□□□ 1.55
GABREP78334 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC24.76■■□□□ 1.55
GABREP78334 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.76■■□□□ 1.55
GABREP78334 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
GABREP78334 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.75■■□□□ 1.55
GABREP78334 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.75■■□□□ 1.55
GABREP78334 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
GABREP78334 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.75■■□□□ 1.55
GABREP78334 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
GABREP78334 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.74■■□□□ 1.55
GABREP78334 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
GABREP78334 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
GABREP78334 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
GABREP78334 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
GABREP78334 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
GABREP78334 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.71■■□□□ 1.55
GABREP78334 AC010864.1-201ENST00000609407 1511 ntBASIC24.71■■□□□ 1.55
GABREP78334 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
GABREP78334 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
GABREP78334 AC008813.1-201ENST00000536597 885 ntBASIC24.71■■□□□ 1.55
GABREP78334 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
GABREP78334 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
GABREP78334 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
GABREP78334 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
GABREP78334 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
GABREP78334 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
GABREP78334 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
GABREP78334 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
GABREP78334 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
GABREP78334 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.68■■□□□ 1.54
GABREP78334 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
GABREP78334 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
GABREP78334 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.67■■□□□ 1.54
GABREP78334 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
GABREP78334 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
GABREP78334 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
GABREP78334 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.66■■□□□ 1.54
GABREP78334 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms