Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDX1P52945 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.3■■□□□ 1.64
PDX1P52945 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDX1P52945 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.29■■□□□ 1.64
PDX1P52945 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
PDX1P52945 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDX1P52945 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDX1P52945 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PDX1P52945 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PDX1P52945 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PDX1P52945 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
PDX1P52945 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.26■■□□□ 1.63
PDX1P52945 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDX1P52945 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.25■■□□□ 1.63
PDX1P52945 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.25■■□□□ 1.63
PDX1P52945 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
PDX1P52945 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.25■■□□□ 1.63
PDX1P52945 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDX1P52945 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDX1P52945 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDX1P52945 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.24■■□□□ 1.63
PDX1P52945 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PDX1P52945 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.23■■□□□ 1.63
PDX1P52945 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PDX1P52945 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
PDX1P52945 AL161658.1-201ENST00000623641 1967 ntBASIC25.22■■□□□ 1.63
PDX1P52945 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.21■■□□□ 1.63
PDX1P52945 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDX1P52945 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PDX1P52945 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.2■■□□□ 1.63
PDX1P52945 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.63
PDX1P52945 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PDX1P52945 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PDX1P52945 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDX1P52945 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.19■■□□□ 1.62
PDX1P52945 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDX1P52945 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.19■■□□□ 1.62
PDX1P52945 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PDX1P52945 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.18■■□□□ 1.62
PDX1P52945 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.18■■□□□ 1.62
PDX1P52945 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.18■■□□□ 1.62
PDX1P52945 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PDX1P52945 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.17■■□□□ 1.62
PDX1P52945 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDX1P52945 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.15■■□□□ 1.62
PDX1P52945 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
PDX1P52945 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.14■■□□□ 1.62
PDX1P52945 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PDX1P52945 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.14■■□□□ 1.62
PDX1P52945 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PDX1P52945 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
PDX1P52945 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.13■■□□□ 1.61
PDX1P52945 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.12■■□□□ 1.61
PDX1P52945 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.12■■□□□ 1.61
PDX1P52945 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.12■■□□□ 1.61
PDX1P52945 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
PDX1P52945 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PDX1P52945 LINC00273-201ENST00000539813 1452 ntBASIC25.1■■□□□ 1.61
PDX1P52945 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PDX1P52945 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.1■■□□□ 1.61
PDX1P52945 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
PDX1P52945 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PDX1P52945 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PDX1P52945 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PDX1P52945 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PDX1P52945 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PDX1P52945 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PDX1P52945 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PDX1P52945 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PDX1P52945 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PDX1P52945 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PDX1P52945 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PDX1P52945 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PDX1P52945 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDX1P52945 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDX1P52945 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDX1P52945 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
PDX1P52945 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PDX1P52945 AC010864.1-201ENST00000609407 1511 ntBASIC25.07■■□□□ 1.6
PDX1P52945 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.07■■□□□ 1.6
PDX1P52945 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.07■■□□□ 1.6
PDX1P52945 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.06■■□□□ 1.6
PDX1P52945 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.06■■□□□ 1.6
PDX1P52945 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.06■■□□□ 1.6
PDX1P52945 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PDX1P52945 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.04■■□□□ 1.6
PDX1P52945 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.04■■□□□ 1.6
PDX1P52945 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PDX1P52945 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PDX1P52945 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PDX1P52945 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PDX1P52945 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PDX1P52945 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PDX1P52945 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.02■■□□□ 1.6
PDX1P52945 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PDX1P52945 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.02■■□□□ 1.6
PDX1P52945 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.02■■□□□ 1.6
PDX1P52945 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PDX1P52945 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDX1P52945 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms