Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LCN1P31025 MIR6090-201ENST00000622481 60 ntBASIC23.91■■□□□ 1.42
LCN1P31025 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LCN1P31025 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LCN1P31025 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
LCN1P31025 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
LCN1P31025 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
LCN1P31025 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LCN1P31025 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
LCN1P31025 ABCB10P3-201ENST00000561950 2166 ntBASIC23.89■■□□□ 1.42
LCN1P31025 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
LCN1P31025 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.89■■□□□ 1.41
LCN1P31025 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.89■■□□□ 1.41
LCN1P31025 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LCN1P31025 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LCN1P31025 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LCN1P31025 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.88■■□□□ 1.41
LCN1P31025 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
LCN1P31025 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.87■■□□□ 1.41
LCN1P31025 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.87■■□□□ 1.41
LCN1P31025 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.87■■□□□ 1.41
LCN1P31025 AL139393.2-201ENST00000608721 2025 ntBASIC23.86■■□□□ 1.41
LCN1P31025 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LCN1P31025 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.86■■□□□ 1.41
LCN1P31025 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.85■■□□□ 1.41
LCN1P31025 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LCN1P31025 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LCN1P31025 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
LCN1P31025 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
LCN1P31025 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LCN1P31025 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.83■■□□□ 1.41
LCN1P31025 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.83■■□□□ 1.41
LCN1P31025 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
LCN1P31025 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
LCN1P31025 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LCN1P31025 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
LCN1P31025 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LCN1P31025 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.8■■□□□ 1.4
LCN1P31025 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LCN1P31025 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
LCN1P31025 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LCN1P31025 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LCN1P31025 RPS2P35-201ENST00000443417 897 ntBASIC23.79■■□□□ 1.4
LCN1P31025 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LCN1P31025 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LCN1P31025 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LCN1P31025 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LCN1P31025 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.76■■□□□ 1.39
LCN1P31025 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.76■■□□□ 1.39
LCN1P31025 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LCN1P31025 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LCN1P31025 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LCN1P31025 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.75■■□□□ 1.39
LCN1P31025 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LCN1P31025 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LCN1P31025 LINC00273-201ENST00000539813 1452 ntBASIC23.75■■□□□ 1.39
LCN1P31025 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LCN1P31025 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
LCN1P31025 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.74■■□□□ 1.39
LCN1P31025 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LCN1P31025 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
LCN1P31025 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LCN1P31025 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LCN1P31025 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LCN1P31025 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.72■■□□□ 1.39
LCN1P31025 AC139426.1-201ENST00000568218 2529 ntBASIC23.72■■□□□ 1.39
LCN1P31025 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
LCN1P31025 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
LCN1P31025 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
LCN1P31025 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LCN1P31025 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LCN1P31025 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
LCN1P31025 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LCN1P31025 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
LCN1P31025 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
LCN1P31025 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LCN1P31025 DUX4L29-201ENST00000425409 679 ntBASIC23.68■■□□□ 1.38
LCN1P31025 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
LCN1P31025 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.68■■□□□ 1.38
LCN1P31025 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.68■■□□□ 1.38
LCN1P31025 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.68■■□□□ 1.38
LCN1P31025 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LCN1P31025 AC135983.2-203ENST00000454486 1613 ntBASIC23.67■■□□□ 1.38
LCN1P31025 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
LCN1P31025 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LCN1P31025 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LCN1P31025 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LCN1P31025 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
LCN1P31025 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.66■■□□□ 1.38
LCN1P31025 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.66■■□□□ 1.38
LCN1P31025 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LCN1P31025 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.66■■□□□ 1.38
LCN1P31025 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LCN1P31025 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
LCN1P31025 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.65■■□□□ 1.38
LCN1P31025 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.65■■□□□ 1.38
LCN1P31025 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.65■■□□□ 1.38
LCN1P31025 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
LCN1P31025 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
LCN1P31025 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms