Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC120057.4-201ENST00000624722 1615 ntBASIC25.8■■□□□ 1.72
PCDHGA12O60330 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHGA12O60330 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGA12O60330 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGA12O60330 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGA12O60330 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
PCDHGA12O60330 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHGA12O60330 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
PCDHGA12O60330 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.76■■□□□ 1.71
PCDHGA12O60330 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGA12O60330 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
PCDHGA12O60330 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGA12O60330 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.74■■□□□ 1.71
PCDHGA12O60330 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
PCDHGA12O60330 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.73■■□□□ 1.71
PCDHGA12O60330 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.73■■□□□ 1.71
PCDHGA12O60330 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.73■■□□□ 1.71
PCDHGA12O60330 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGA12O60330 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGA12O60330 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGA12O60330 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGA12O60330 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGA12O60330 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGA12O60330 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGA12O60330 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGA12O60330 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGA12O60330 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.71■■□□□ 1.71
PCDHGA12O60330 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDHGA12O60330 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGA12O60330 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHGA12O60330 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.7■■□□□ 1.7
PCDHGA12O60330 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.7■■□□□ 1.7
PCDHGA12O60330 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.68■■□□□ 1.7
PCDHGA12O60330 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
PCDHGA12O60330 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.68■■□□□ 1.7
PCDHGA12O60330 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGA12O60330 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGA12O60330 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGA12O60330 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
PCDHGA12O60330 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDHGA12O60330 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGA12O60330 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.66■■□□□ 1.7
PCDHGA12O60330 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDHGA12O60330 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDHGA12O60330 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGA12O60330 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGA12O60330 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA12O60330 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA12O60330 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA12O60330 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA12O60330 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDHGA12O60330 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.65■■□□□ 1.7
PCDHGA12O60330 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA12O60330 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA12O60330 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHGA12O60330 RARRES2P2-201ENST00000394842 485 ntBASIC25.64■■□□□ 1.7
PCDHGA12O60330 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
PCDHGA12O60330 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHGA12O60330 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHGA12O60330 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGA12O60330 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGA12O60330 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGA12O60330 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGA12O60330 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDHGA12O60330 LINC00273-201ENST00000539813 1452 ntBASIC25.61■■□□□ 1.69
PCDHGA12O60330 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGA12O60330 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGA12O60330 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
PCDHGA12O60330 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDHGA12O60330 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGA12O60330 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGA12O60330 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGA12O60330 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.57■■□□□ 1.68
PCDHGA12O60330 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
PCDHGA12O60330 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDHGA12O60330 ABHD17AP5-201ENST00000580133 923 ntBASIC25.57■■□□□ 1.68
PCDHGA12O60330 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDHGA12O60330 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA12O60330 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA12O60330 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHGA12O60330 GPX1-201ENST00000419349 1106 ntBASIC25.56■■□□□ 1.68
PCDHGA12O60330 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA12O60330 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGA12O60330 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGA12O60330 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDHGA12O60330 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGA12O60330 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDHGA12O60330 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGA12O60330 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGA12O60330 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGA12O60330 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGA12O60330 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGA12O60330 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGA12O60330 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
PCDHGA12O60330 RNF126P1-201ENST00000567452 1320 ntBASIC25.54■■□□□ 1.68
PCDHGA12O60330 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGA12O60330 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGA12O60330 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.52■■□□□ 1.68
PCDHGA12O60330 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
PCDHGA12O60330 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms