Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH17O14917 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH17O14917 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.7■■□□□ 1.54
PCDH17O14917 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH17O14917 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH17O14917 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.69■■□□□ 1.54
PCDH17O14917 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDH17O14917 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH17O14917 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH17O14917 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDH17O14917 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH17O14917 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH17O14917 AC021231.2-201ENST00000594613 730 ntBASIC24.68■■□□□ 1.54
PCDH17O14917 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH17O14917 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
PCDH17O14917 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH17O14917 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH17O14917 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDH17O14917 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH17O14917 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH17O14917 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PCDH17O14917 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH17O14917 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDH17O14917 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH17O14917 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PCDH17O14917 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDH17O14917 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH17O14917 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH17O14917 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
PCDH17O14917 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH17O14917 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
PCDH17O14917 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDH17O14917 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH17O14917 HLA-V-202ENST00000446817 847 ntBASIC24.6■■□□□ 1.53
PCDH17O14917 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDH17O14917 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH17O14917 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH17O14917 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDH17O14917 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.58■■□□□ 1.53
PCDH17O14917 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDH17O14917 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDH17O14917 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.58■■□□□ 1.52
PCDH17O14917 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH17O14917 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDH17O14917 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH17O14917 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
PCDH17O14917 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
PCDH17O14917 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH17O14917 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH17O14917 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
PCDH17O14917 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.55■■□□□ 1.52
PCDH17O14917 LINC01971-201ENST00000617888 1048 ntBASIC24.55■■□□□ 1.52
PCDH17O14917 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
PCDH17O14917 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
PCDH17O14917 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH17O14917 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH17O14917 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDH17O14917 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDH17O14917 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDH17O14917 AC010864.1-201ENST00000609407 1511 ntBASIC24.52■■□□□ 1.52
PCDH17O14917 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
PCDH17O14917 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDH17O14917 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.52■■□□□ 1.52
PCDH17O14917 AL135925.1-201ENST00000605920 1701 ntBASIC24.52■■□□□ 1.52
PCDH17O14917 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH17O14917 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.5■■□□□ 1.51
PCDH17O14917 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDH17O14917 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH17O14917 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
PCDH17O14917 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH17O14917 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDH17O14917 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDH17O14917 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH17O14917 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDH17O14917 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH17O14917 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
PCDH17O14917 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
PCDH17O14917 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
PCDH17O14917 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH17O14917 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH17O14917 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
PCDH17O14917 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH17O14917 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.45■■□□□ 1.5
PCDH17O14917 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.45■■□□□ 1.5
PCDH17O14917 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
PCDH17O14917 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH17O14917 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH17O14917 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH17O14917 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.44■■□□□ 1.5
PCDH17O14917 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH17O14917 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH17O14917 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.43■■□□□ 1.5
PCDH17O14917 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH17O14917 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH17O14917 DUX4L11-201ENST00000611504 1267 ntBASIC24.42■■□□□ 1.5
PCDH17O14917 DUX4L12-201ENST00000614593 1267 ntBASIC24.42■■□□□ 1.5
PCDH17O14917 DUX4L14-201ENST00000621227 1267 ntBASIC24.42■■□□□ 1.5
PCDH17O14917 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH17O14917 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH17O14917 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 1121.9 ms