Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.36■■□□□ 1.33
TNFSF11O14788 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.36■■□□□ 1.33
TNFSF11O14788 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TNFSF11O14788 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
TNFSF11O14788 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFSF11O14788 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TNFSF11O14788 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFSF11O14788 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TNFSF11O14788 ZNRF2P2-203ENST00000454624 420 ntBASIC23.34■■□□□ 1.33
TNFSF11O14788 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TNFSF11O14788 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TNFSF11O14788 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TNFSF11O14788 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TNFSF11O14788 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TNFSF11O14788 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFSF11O14788 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFSF11O14788 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFSF11O14788 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.32■■□□□ 1.32
TNFSF11O14788 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFSF11O14788 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFSF11O14788 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TNFSF11O14788 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFSF11O14788 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TNFSF11O14788 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.3■■□□□ 1.32
TNFSF11O14788 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
TNFSF11O14788 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
TNFSF11O14788 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TNFSF11O14788 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.29■■□□□ 1.32
TNFSF11O14788 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TNFSF11O14788 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
TNFSF11O14788 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
TNFSF11O14788 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TNFSF11O14788 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TNFSF11O14788 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TNFSF11O14788 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.26■■□□□ 1.31
TNFSF11O14788 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.26■■□□□ 1.31
TNFSF11O14788 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TNFSF11O14788 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TNFSF11O14788 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
TNFSF11O14788 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNFSF11O14788 LINC00273-201ENST00000539813 1452 ntBASIC23.25■■□□□ 1.31
TNFSF11O14788 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNFSF11O14788 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNFSF11O14788 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNFSF11O14788 MIR7108-201ENST00000614319 87 ntBASIC23.25■■□□□ 1.31
TNFSF11O14788 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TNFSF11O14788 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFSF11O14788 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFSF11O14788 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.23■■□□□ 1.31
TNFSF11O14788 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.22■■□□□ 1.31
TNFSF11O14788 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.22■■□□□ 1.31
TNFSF11O14788 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.22■■□□□ 1.31
TNFSF11O14788 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.22■■□□□ 1.31
TNFSF11O14788 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.22■■□□□ 1.31
TNFSF11O14788 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFSF11O14788 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFSF11O14788 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFSF11O14788 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.21■■□□□ 1.31
TNFSF11O14788 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.21■■□□□ 1.31
TNFSF11O14788 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFSF11O14788 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFSF11O14788 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TNFSF11O14788 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.2■■□□□ 1.3
TNFSF11O14788 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFSF11O14788 LINC01971-201ENST00000617888 1048 ntBASIC23.19■■□□□ 1.3
TNFSF11O14788 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFSF11O14788 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.17■■□□□ 1.3
TNFSF11O14788 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TNFSF11O14788 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
TNFSF11O14788 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.17■■□□□ 1.3
TNFSF11O14788 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.17■■□□□ 1.3
TNFSF11O14788 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
TNFSF11O14788 AC135983.2-203ENST00000454486 1613 ntBASIC23.16■■□□□ 1.3
TNFSF11O14788 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
TNFSF11O14788 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFSF11O14788 AL139393.2-201ENST00000608721 2025 ntBASIC23.16■■□□□ 1.3
TNFSF11O14788 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TNFSF11O14788 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TNFSF11O14788 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFSF11O14788 WHAMMP2-203ENST00000563942 1603 ntBASIC23.15■■□□□ 1.3
TNFSF11O14788 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFSF11O14788 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFSF11O14788 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
TNFSF11O14788 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TNFSF11O14788 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
TNFSF11O14788 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.14■■□□□ 1.29
TNFSF11O14788 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
TNFSF11O14788 DUX4L11-201ENST00000611504 1267 ntBASIC23.13■■□□□ 1.29
TNFSF11O14788 DUX4L12-201ENST00000614593 1267 ntBASIC23.13■■□□□ 1.29
TNFSF11O14788 DUX4L14-201ENST00000621227 1267 ntBASIC23.13■■□□□ 1.29
TNFSF11O14788 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFSF11O14788 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFSF11O14788 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.12■■□□□ 1.29
TNFSF11O14788 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TNFSF11O14788 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
TNFSF11O14788 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.1■■□□□ 1.29
TNFSF11O14788 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.1■■□□□ 1.29
TNFSF11O14788 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.1■■□□□ 1.29
TNFSF11O14788 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
TNFSF11O14788 ABCB10P3-201ENST00000561950 2166 ntBASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms