Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC13.97□□□□□ -0.17
KRTAP4-1Q9BYQ7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KRTAP4-1Q9BYQ7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRTAP4-1Q9BYQ7 DUX4L13-201ENST00000554103 1267 ntBASIC13.97□□□□□ -0.17
KRTAP4-1Q9BYQ7 DUX4L15-201ENST00000611059 1267 ntBASIC13.97□□□□□ -0.17
KRTAP4-1Q9BYQ7 DUX4L23-201ENST00000615195 1269 ntBASIC13.97□□□□□ -0.17
KRTAP4-1Q9BYQ7 DUX4L24-201ENST00000617576 1269 ntBASIC13.97□□□□□ -0.17
KRTAP4-1Q9BYQ7 DUX4L22-201ENST00000618238 1269 ntBASIC13.97□□□□□ -0.17
KRTAP4-1Q9BYQ7 DUX4L20-201ENST00000619712 1269 ntBASIC13.97□□□□□ -0.17
KRTAP4-1Q9BYQ7 DUX4L21-201ENST00000622058 1269 ntBASIC13.97□□□□□ -0.17
KRTAP4-1Q9BYQ7 DUX4L10-201ENST00000622460 1267 ntBASIC13.97□□□□□ -0.17
KRTAP4-1Q9BYQ7 DUX4L25-201ENST00000624915 1269 ntBASIC13.97□□□□□ -0.17
KRTAP4-1Q9BYQ7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRTAP4-1Q9BYQ7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC13.96□□□□□ -0.17
KRTAP4-1Q9BYQ7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRTAP4-1Q9BYQ7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
KRTAP4-1Q9BYQ7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC13.95□□□□□ -0.18
KRTAP4-1Q9BYQ7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC13.95□□□□□ -0.18
KRTAP4-1Q9BYQ7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRTAP4-1Q9BYQ7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
KRTAP4-1Q9BYQ7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRTAP4-1Q9BYQ7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRTAP4-1Q9BYQ7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRTAP4-1Q9BYQ7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRTAP4-1Q9BYQ7 HES6-205ENST00000409356 528 ntTSL 2 BASIC13.94□□□□□ -0.18
KRTAP4-1Q9BYQ7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC13.94□□□□□ -0.18
KRTAP4-1Q9BYQ7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC13.94□□□□□ -0.18
KRTAP4-1Q9BYQ7 AC120057.4-201ENST00000624722 1615 ntBASIC13.93□□□□□ -0.18
KRTAP4-1Q9BYQ7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
KRTAP4-1Q9BYQ7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRTAP4-1Q9BYQ7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KRTAP4-1Q9BYQ7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC13.92□□□□□ -0.18
KRTAP4-1Q9BYQ7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC13.92□□□□□ -0.18
KRTAP4-1Q9BYQ7 CHML-204ENST00000638121 920 ntTSL 2 BASIC13.92□□□□□ -0.18
KRTAP4-1Q9BYQ7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
KRTAP4-1Q9BYQ7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
KRTAP4-1Q9BYQ7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRTAP4-1Q9BYQ7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRTAP4-1Q9BYQ7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRTAP4-1Q9BYQ7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC13.91□□□□□ -0.18
KRTAP4-1Q9BYQ7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC13.91□□□□□ -0.18
KRTAP4-1Q9BYQ7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRTAP4-1Q9BYQ7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRTAP4-1Q9BYQ7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KRTAP4-1Q9BYQ7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KRTAP4-1Q9BYQ7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRTAP4-1Q9BYQ7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KRTAP4-1Q9BYQ7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRTAP4-1Q9BYQ7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC13.9□□□□□ -0.18
KRTAP4-1Q9BYQ7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KRTAP4-1Q9BYQ7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
KRTAP4-1Q9BYQ7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC13.9□□□□□ -0.18
KRTAP4-1Q9BYQ7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRTAP4-1Q9BYQ7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
KRTAP4-1Q9BYQ7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KRTAP4-1Q9BYQ7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC13.89□□□□□ -0.19
KRTAP4-1Q9BYQ7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KRTAP4-1Q9BYQ7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC13.88□□□□□ -0.19
KRTAP4-1Q9BYQ7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC13.88□□□□□ -0.19
KRTAP4-1Q9BYQ7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
KRTAP4-1Q9BYQ7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC13.87□□□□□ -0.19
KRTAP4-1Q9BYQ7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC13.87□□□□□ -0.19
KRTAP4-1Q9BYQ7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC13.87□□□□□ -0.19
KRTAP4-1Q9BYQ7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KRTAP4-1Q9BYQ7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KRTAP4-1Q9BYQ7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
KRTAP4-1Q9BYQ7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KRTAP4-1Q9BYQ7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KRTAP4-1Q9BYQ7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
KRTAP4-1Q9BYQ7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
KRTAP4-1Q9BYQ7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KRTAP4-1Q9BYQ7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KRTAP4-1Q9BYQ7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC13.85□□□□□ -0.19
KRTAP4-1Q9BYQ7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC13.85□□□□□ -0.19
KRTAP4-1Q9BYQ7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC13.85□□□□□ -0.19
KRTAP4-1Q9BYQ7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KRTAP4-1Q9BYQ7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KRTAP4-1Q9BYQ7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRTAP4-1Q9BYQ7 RARRES2P2-201ENST00000394842 485 ntBASIC13.84□□□□□ -0.19
KRTAP4-1Q9BYQ7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC13.84□□□□□ -0.19
KRTAP4-1Q9BYQ7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRTAP4-1Q9BYQ7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRTAP4-1Q9BYQ7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
KRTAP4-1Q9BYQ7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KRTAP4-1Q9BYQ7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KRTAP4-1Q9BYQ7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KRTAP4-1Q9BYQ7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KRTAP4-1Q9BYQ7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KRTAP4-1Q9BYQ7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
KRTAP4-1Q9BYQ7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
KRTAP4-1Q9BYQ7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
KRTAP4-1Q9BYQ7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KRTAP4-1Q9BYQ7 AL161658.1-201ENST00000623641 1967 ntBASIC13.82□□□□□ -0.2
KRTAP4-1Q9BYQ7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KRTAP4-1Q9BYQ7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
KRTAP4-1Q9BYQ7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KRTAP4-1Q9BYQ7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KRTAP4-1Q9BYQ7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC13.81□□□□□ -0.2
KRTAP4-1Q9BYQ7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRTAP4-1Q9BYQ7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms