Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL26A1Q96A83 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL26A1Q96A83 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
COL26A1Q96A83 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.2■■□□□ 1.62
COL26A1Q96A83 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL26A1Q96A83 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
COL26A1Q96A83 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.19■■□□□ 1.62
COL26A1Q96A83 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.19■■□□□ 1.62
COL26A1Q96A83 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.18■■□□□ 1.62
COL26A1Q96A83 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL26A1Q96A83 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
COL26A1Q96A83 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
COL26A1Q96A83 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.18■■□□□ 1.62
COL26A1Q96A83 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.17■■□□□ 1.62
COL26A1Q96A83 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
COL26A1Q96A83 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL26A1Q96A83 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
COL26A1Q96A83 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL26A1Q96A83 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
COL26A1Q96A83 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL26A1Q96A83 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.14■■□□□ 1.62
COL26A1Q96A83 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
COL26A1Q96A83 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.14■■□□□ 1.62
COL26A1Q96A83 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
COL26A1Q96A83 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
COL26A1Q96A83 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL26A1Q96A83 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL26A1Q96A83 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL26A1Q96A83 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL26A1Q96A83 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL26A1Q96A83 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL26A1Q96A83 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.12■■□□□ 1.61
COL26A1Q96A83 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
COL26A1Q96A83 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL26A1Q96A83 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
COL26A1Q96A83 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL26A1Q96A83 MIR639-201ENST00000384974 98 ntBASIC25.1■■□□□ 1.61
COL26A1Q96A83 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL26A1Q96A83 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
COL26A1Q96A83 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.09■■□□□ 1.61
COL26A1Q96A83 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
COL26A1Q96A83 AC108673.1-201ENST00000510422 1159 ntBASIC25.09■■□□□ 1.61
COL26A1Q96A83 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL26A1Q96A83 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.08■■□□□ 1.61
COL26A1Q96A83 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL26A1Q96A83 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL26A1Q96A83 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL26A1Q96A83 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL26A1Q96A83 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
COL26A1Q96A83 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL26A1Q96A83 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.05■■□□□ 1.6
COL26A1Q96A83 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.05■■□□□ 1.6
COL26A1Q96A83 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.05■■□□□ 1.6
COL26A1Q96A83 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.05■■□□□ 1.6
COL26A1Q96A83 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.05■■□□□ 1.6
COL26A1Q96A83 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.04■■□□□ 1.6
COL26A1Q96A83 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
COL26A1Q96A83 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL26A1Q96A83 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL26A1Q96A83 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.02■■□□□ 1.6
COL26A1Q96A83 MIR6090-201ENST00000622481 60 ntBASIC25.02■■□□□ 1.6
COL26A1Q96A83 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
COL26A1Q96A83 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
COL26A1Q96A83 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25■■□□□ 1.59
COL26A1Q96A83 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL26A1Q96A83 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL26A1Q96A83 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL26A1Q96A83 DUX4L29-201ENST00000425409 679 ntBASIC24.99■■□□□ 1.59
COL26A1Q96A83 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.99■■□□□ 1.59
COL26A1Q96A83 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL26A1Q96A83 ABCB10P1-201ENST00000614297 2181 ntBASIC24.99■■□□□ 1.59
COL26A1Q96A83 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
COL26A1Q96A83 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL26A1Q96A83 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL26A1Q96A83 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL26A1Q96A83 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.98■■□□□ 1.59
COL26A1Q96A83 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL26A1Q96A83 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.98■■□□□ 1.59
COL26A1Q96A83 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL26A1Q96A83 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
COL26A1Q96A83 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL26A1Q96A83 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL26A1Q96A83 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
COL26A1Q96A83 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.95■■□□□ 1.58
COL26A1Q96A83 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.95■■□□□ 1.58
COL26A1Q96A83 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
COL26A1Q96A83 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.94■■□□□ 1.58
COL26A1Q96A83 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.94■■□□□ 1.58
COL26A1Q96A83 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.94■■□□□ 1.58
COL26A1Q96A83 MIR935-201ENST00000401179 91 ntBASIC24.93■■□□□ 1.58
COL26A1Q96A83 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL26A1Q96A83 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL26A1Q96A83 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL26A1Q96A83 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.92■■□□□ 1.58
COL26A1Q96A83 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.91■■□□□ 1.58
COL26A1Q96A83 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
COL26A1Q96A83 AC021231.2-201ENST00000594613 730 ntBASIC24.91■■□□□ 1.58
COL26A1Q96A83 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL26A1Q96A83 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
COL26A1Q96A83 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms