Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
RTN4IP1Q8WWV3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.96■■□□□ 1.11
RTN4IP1Q8WWV3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4IP1Q8WWV3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RTN4IP1Q8WWV3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTN4IP1Q8WWV3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTN4IP1Q8WWV3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTN4IP1Q8WWV3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4IP1Q8WWV3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4IP1Q8WWV3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4IP1Q8WWV3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4IP1Q8WWV3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.92■■□□□ 1.1
RTN4IP1Q8WWV3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4IP1Q8WWV3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4IP1Q8WWV3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4IP1Q8WWV3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
RTN4IP1Q8WWV3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4IP1Q8WWV3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RTN4IP1Q8WWV3 WASH5P-204ENST00000632292 975 ntBASIC21.9■■□□□ 1.1
RTN4IP1Q8WWV3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTN4IP1Q8WWV3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RTN4IP1Q8WWV3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.89■■□□□ 1.09
RTN4IP1Q8WWV3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTN4IP1Q8WWV3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTN4IP1Q8WWV3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTN4IP1Q8WWV3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.88■■□□□ 1.09
RTN4IP1Q8WWV3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4IP1Q8WWV3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4IP1Q8WWV3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4IP1Q8WWV3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RTN4IP1Q8WWV3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTN4IP1Q8WWV3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTN4IP1Q8WWV3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RTN4IP1Q8WWV3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTN4IP1Q8WWV3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTN4IP1Q8WWV3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
RTN4IP1Q8WWV3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.84■■□□□ 1.09
RTN4IP1Q8WWV3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.83■■□□□ 1.09
RTN4IP1Q8WWV3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RTN4IP1Q8WWV3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTN4IP1Q8WWV3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTN4IP1Q8WWV3 AC136428.2-201ENST00000563187 214 ntBASIC21.81■■□□□ 1.08
RTN4IP1Q8WWV3 AC097358.2-201ENST00000607541 1159 ntBASIC21.81■■□□□ 1.08
RTN4IP1Q8WWV3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
RTN4IP1Q8WWV3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4IP1Q8WWV3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4IP1Q8WWV3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4IP1Q8WWV3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4IP1Q8WWV3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4IP1Q8WWV3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
RTN4IP1Q8WWV3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.79■■□□□ 1.08
RTN4IP1Q8WWV3 AL139393.2-201ENST00000608721 2025 ntBASIC21.79■■□□□ 1.08
RTN4IP1Q8WWV3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4IP1Q8WWV3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
RTN4IP1Q8WWV3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RTN4IP1Q8WWV3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RTN4IP1Q8WWV3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RTN4IP1Q8WWV3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTN4IP1Q8WWV3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.75■■□□□ 1.07
RTN4IP1Q8WWV3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RTN4IP1Q8WWV3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4IP1Q8WWV3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
RTN4IP1Q8WWV3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4IP1Q8WWV3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.73■■□□□ 1.07
RTN4IP1Q8WWV3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4IP1Q8WWV3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.73■■□□□ 1.07
RTN4IP1Q8WWV3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.73■■□□□ 1.07
RTN4IP1Q8WWV3 AL391121.1-201ENST00000607967 1349 ntBASIC21.73■■□□□ 1.07
RTN4IP1Q8WWV3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
RTN4IP1Q8WWV3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.72■■□□□ 1.07
RTN4IP1Q8WWV3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.72■■□□□ 1.07
RTN4IP1Q8WWV3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4IP1Q8WWV3 DRD5P2-201ENST00000421395 2012 ntBASIC21.72■■□□□ 1.07
RTN4IP1Q8WWV3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RTN4IP1Q8WWV3 CAHM-201ENST00000604200 896 ntBASIC21.71■■□□□ 1.07
RTN4IP1Q8WWV3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4IP1Q8WWV3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RTN4IP1Q8WWV3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4IP1Q8WWV3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4IP1Q8WWV3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4IP1Q8WWV3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.7■■□□□ 1.06
RTN4IP1Q8WWV3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTN4IP1Q8WWV3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTN4IP1Q8WWV3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.68■■□□□ 1.06
RTN4IP1Q8WWV3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4IP1Q8WWV3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4IP1Q8WWV3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4IP1Q8WWV3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4IP1Q8WWV3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
RTN4IP1Q8WWV3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN4IP1Q8WWV3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN4IP1Q8WWV3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.66■■□□□ 1.06
RTN4IP1Q8WWV3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4IP1Q8WWV3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4IP1Q8WWV3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.65■■□□□ 1.06
RTN4IP1Q8WWV3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTN4IP1Q8WWV3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTN4IP1Q8WWV3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RTN4IP1Q8WWV3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN4IP1Q8WWV3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms