Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
RTN4IP1Q8WWV3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.96■■□□□ 1.11
RTN4IP1Q8WWV3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4IP1Q8WWV3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RTN4IP1Q8WWV3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTN4IP1Q8WWV3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTN4IP1Q8WWV3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTN4IP1Q8WWV3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4IP1Q8WWV3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4IP1Q8WWV3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4IP1Q8WWV3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4IP1Q8WWV3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.92■■□□□ 1.1
RTN4IP1Q8WWV3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4IP1Q8WWV3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4IP1Q8WWV3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4IP1Q8WWV3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
RTN4IP1Q8WWV3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4IP1Q8WWV3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RTN4IP1Q8WWV3 WASH5P-204ENST00000632292 975 ntBASIC21.9■■□□□ 1.1
RTN4IP1Q8WWV3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTN4IP1Q8WWV3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RTN4IP1Q8WWV3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.89■■□□□ 1.09
RTN4IP1Q8WWV3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTN4IP1Q8WWV3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTN4IP1Q8WWV3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTN4IP1Q8WWV3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.88■■□□□ 1.09
RTN4IP1Q8WWV3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4IP1Q8WWV3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4IP1Q8WWV3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4IP1Q8WWV3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RTN4IP1Q8WWV3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTN4IP1Q8WWV3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTN4IP1Q8WWV3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RTN4IP1Q8WWV3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTN4IP1Q8WWV3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTN4IP1Q8WWV3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
RTN4IP1Q8WWV3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.84■■□□□ 1.09
RTN4IP1Q8WWV3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.83■■□□□ 1.09
RTN4IP1Q8WWV3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RTN4IP1Q8WWV3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTN4IP1Q8WWV3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTN4IP1Q8WWV3 AC136428.2-201ENST00000563187 214 ntBASIC21.81■■□□□ 1.08
RTN4IP1Q8WWV3 AC097358.2-201ENST00000607541 1159 ntBASIC21.81■■□□□ 1.08
RTN4IP1Q8WWV3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
RTN4IP1Q8WWV3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4IP1Q8WWV3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4IP1Q8WWV3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4IP1Q8WWV3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4IP1Q8WWV3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4IP1Q8WWV3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
RTN4IP1Q8WWV3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.79■■□□□ 1.08
RTN4IP1Q8WWV3 AL139393.2-201ENST00000608721 2025 ntBASIC21.79■■□□□ 1.08
RTN4IP1Q8WWV3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4IP1Q8WWV3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
RTN4IP1Q8WWV3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RTN4IP1Q8WWV3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RTN4IP1Q8WWV3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RTN4IP1Q8WWV3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTN4IP1Q8WWV3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.75■■□□□ 1.07
RTN4IP1Q8WWV3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RTN4IP1Q8WWV3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4IP1Q8WWV3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
RTN4IP1Q8WWV3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4IP1Q8WWV3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.73■■□□□ 1.07
RTN4IP1Q8WWV3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4IP1Q8WWV3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.73■■□□□ 1.07
RTN4IP1Q8WWV3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.73■■□□□ 1.07
RTN4IP1Q8WWV3 AL391121.1-201ENST00000607967 1349 ntBASIC21.73■■□□□ 1.07
RTN4IP1Q8WWV3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
RTN4IP1Q8WWV3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.72■■□□□ 1.07
RTN4IP1Q8WWV3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.72■■□□□ 1.07
RTN4IP1Q8WWV3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4IP1Q8WWV3 DRD5P2-201ENST00000421395 2012 ntBASIC21.72■■□□□ 1.07
RTN4IP1Q8WWV3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RTN4IP1Q8WWV3 CAHM-201ENST00000604200 896 ntBASIC21.71■■□□□ 1.07
RTN4IP1Q8WWV3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4IP1Q8WWV3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RTN4IP1Q8WWV3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4IP1Q8WWV3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4IP1Q8WWV3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4IP1Q8WWV3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.7■■□□□ 1.06
RTN4IP1Q8WWV3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTN4IP1Q8WWV3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTN4IP1Q8WWV3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.68■■□□□ 1.06
RTN4IP1Q8WWV3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4IP1Q8WWV3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4IP1Q8WWV3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4IP1Q8WWV3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4IP1Q8WWV3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
RTN4IP1Q8WWV3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN4IP1Q8WWV3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN4IP1Q8WWV3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.66■■□□□ 1.06
RTN4IP1Q8WWV3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4IP1Q8WWV3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4IP1Q8WWV3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.65■■□□□ 1.06
RTN4IP1Q8WWV3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTN4IP1Q8WWV3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTN4IP1Q8WWV3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RTN4IP1Q8WWV3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN4IP1Q8WWV3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms