Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC40.93■■■■■ 4.14
CDC42BPAQ5VT25 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC40.93■■■■■ 4.14
CDC42BPAQ5VT25 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC40.91■■■■■ 4.14
CDC42BPAQ5VT25 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC40.9■■■■■ 4.14
CDC42BPAQ5VT25 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC40.9■■■■■ 4.14
CDC42BPAQ5VT25 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC40.89■■■■■ 4.14
CDC42BPAQ5VT25 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC40.88■■■■■ 4.13
CDC42BPAQ5VT25 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC40.87■■■■■ 4.13
CDC42BPAQ5VT25 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC40.87■■■■■ 4.13
CDC42BPAQ5VT25 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC40.86■■■■■ 4.13
CDC42BPAQ5VT25 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC40.85■■■■■ 4.13
CDC42BPAQ5VT25 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC40.83■■■■■ 4.13
CDC42BPAQ5VT25 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC40.83■■■■■ 4.13
CDC42BPAQ5VT25 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC40.82■■■■■ 4.13
CDC42BPAQ5VT25 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC40.81■■■■■ 4.12
CDC42BPAQ5VT25 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC40.8■■■■■ 4.12
CDC42BPAQ5VT25 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC40.79■■■■■ 4.12
CDC42BPAQ5VT25 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC40.79■■■■■ 4.12
CDC42BPAQ5VT25 DUX4L13-201ENST00000554103 1267 ntBASIC40.79■■■■■ 4.12
CDC42BPAQ5VT25 DUX4L15-201ENST00000611059 1267 ntBASIC40.79■■■■■ 4.12
CDC42BPAQ5VT25 DUX4L23-201ENST00000615195 1269 ntBASIC40.79■■■■■ 4.12
CDC42BPAQ5VT25 DUX4L24-201ENST00000617576 1269 ntBASIC40.79■■■■■ 4.12
CDC42BPAQ5VT25 DUX4L22-201ENST00000618238 1269 ntBASIC40.79■■■■■ 4.12
CDC42BPAQ5VT25 DUX4L20-201ENST00000619712 1269 ntBASIC40.79■■■■■ 4.12
CDC42BPAQ5VT25 DUX4L21-201ENST00000622058 1269 ntBASIC40.79■■■■■ 4.12
CDC42BPAQ5VT25 DUX4L10-201ENST00000622460 1267 ntBASIC40.79■■■■■ 4.12
CDC42BPAQ5VT25 DUX4L25-201ENST00000624915 1269 ntBASIC40.79■■■■■ 4.12
CDC42BPAQ5VT25 BRD4-212ENST00000630599 726 ntTSL 2 BASIC40.79■■■■■ 4.12
CDC42BPAQ5VT25 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC40.76■■■■■ 4.12
CDC42BPAQ5VT25 EI24-212ENST00000615917 1407 ntTSL 2 BASIC40.75■■■■■ 4.11
CDC42BPAQ5VT25 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC40.73■■■■■ 4.11
CDC42BPAQ5VT25 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC40.73■■■■■ 4.11
CDC42BPAQ5VT25 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC40.73■■■■■ 4.11
CDC42BPAQ5VT25 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC40.72■■■■■ 4.11
CDC42BPAQ5VT25 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC40.7■■■■■ 4.11
CDC42BPAQ5VT25 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC40.7■■■■■ 4.11
CDC42BPAQ5VT25 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC40.69■■■■■ 4.1
CDC42BPAQ5VT25 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC40.69■■■■■ 4.1
CDC42BPAQ5VT25 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC40.68■■■■■ 4.1
CDC42BPAQ5VT25 METRNL-202ENST00000570778 967 ntTSL 5 BASIC40.68■■■■■ 4.1
CDC42BPAQ5VT25 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC40.68■■■■■ 4.1
CDC42BPAQ5VT25 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC40.67■■■■■ 4.1
CDC42BPAQ5VT25 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC40.66■■■■■ 4.1
CDC42BPAQ5VT25 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC40.66■■■■■ 4.1
CDC42BPAQ5VT25 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC40.66■■■■■ 4.1
CDC42BPAQ5VT25 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC40.65■■■■■ 4.1
CDC42BPAQ5VT25 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC40.65■■■■■ 4.1
CDC42BPAQ5VT25 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC40.64■■■■■ 4.1
CDC42BPAQ5VT25 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC40.63■■■■■ 4.09
CDC42BPAQ5VT25 ABHD17AP3-201ENST00000503096 1137 ntBASIC40.62■■■■■ 4.09
CDC42BPAQ5VT25 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC40.61■■■■■ 4.09
CDC42BPAQ5VT25 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC40.61■■■■■ 4.09
CDC42BPAQ5VT25 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC40.6■■■■■ 4.09
CDC42BPAQ5VT25 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC40.6■■■■■ 4.09
CDC42BPAQ5VT25 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC40.6■■■■■ 4.09
CDC42BPAQ5VT25 CHML-204ENST00000638121 920 ntTSL 2 BASIC40.59■■■■■ 4.09
CDC42BPAQ5VT25 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC40.58■■■■■ 4.09
CDC42BPAQ5VT25 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
CDC42BPAQ5VT25 LINC00273-201ENST00000539813 1452 ntBASIC40.55■■■■■ 4.08
CDC42BPAQ5VT25 HES6-205ENST00000409356 528 ntTSL 2 BASIC40.55■■■■■ 4.08
CDC42BPAQ5VT25 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC40.55■■■■■ 4.08
CDC42BPAQ5VT25 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC40.54■■■■■ 4.08
CDC42BPAQ5VT25 SRP68-213ENST00000629930 165 ntTSL 5 BASIC40.54■■■■■ 4.08
CDC42BPAQ5VT25 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
CDC42BPAQ5VT25 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
CDC42BPAQ5VT25 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
CDC42BPAQ5VT25 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC40.52■■■■■ 4.08
CDC42BPAQ5VT25 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC40.52■■■■■ 4.08
CDC42BPAQ5VT25 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC40.51■■■■■ 4.08
CDC42BPAQ5VT25 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC40.51■■■■■ 4.08
CDC42BPAQ5VT25 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC40.5■■■■■ 4.07
CDC42BPAQ5VT25 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC40.5■■■■■ 4.07
CDC42BPAQ5VT25 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
CDC42BPAQ5VT25 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC40.5■■■■■ 4.07
CDC42BPAQ5VT25 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC40.5■■■■■ 4.07
CDC42BPAQ5VT25 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC40.49■■■■■ 4.07
CDC42BPAQ5VT25 AL161658.1-201ENST00000623641 1967 ntBASIC40.47■■■■■ 4.07
CDC42BPAQ5VT25 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC40.47■■■■■ 4.07
CDC42BPAQ5VT25 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC40.47■■■■■ 4.07
CDC42BPAQ5VT25 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC40.47■■■■■ 4.07
CDC42BPAQ5VT25 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC40.45■■■■■ 4.07
CDC42BPAQ5VT25 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC40.45■■■■■ 4.07
CDC42BPAQ5VT25 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC40.45■■■■■ 4.07
CDC42BPAQ5VT25 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC40.44■■■■■ 4.06
CDC42BPAQ5VT25 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC40.44■■■■■ 4.06
CDC42BPAQ5VT25 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC40.43■■■■■ 4.06
CDC42BPAQ5VT25 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC40.43■■■■■ 4.06
CDC42BPAQ5VT25 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC40.43■■■■■ 4.06
CDC42BPAQ5VT25 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC40.42■■■■■ 4.06
CDC42BPAQ5VT25 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC40.41■■■■■ 4.06
CDC42BPAQ5VT25 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC40.4■■■■■ 4.06
CDC42BPAQ5VT25 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.06
CDC42BPAQ5VT25 AC010864.1-201ENST00000609407 1511 ntBASIC40.38■■■■■ 4.06
CDC42BPAQ5VT25 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC40.38■■■■■ 4.05
CDC42BPAQ5VT25 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC40.36■■■■■ 4.05
CDC42BPAQ5VT25 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC40.36■■■■■ 4.05
CDC42BPAQ5VT25 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC40.34■■■■■ 4.05
CDC42BPAQ5VT25 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC40.34■■■■■ 4.05
CDC42BPAQ5VT25 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC40.34■■■■■ 4.05
CDC42BPAQ5VT25 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC40.34■■■■■ 4.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms