Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS13DQ5THJ4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS13DQ5THJ4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.16■□□□□ 0.5
VPS13DQ5THJ4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.16■□□□□ 0.5
VPS13DQ5THJ4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS13DQ5THJ4 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS13DQ5THJ4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.16■□□□□ 0.5
VPS13DQ5THJ4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS13DQ5THJ4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS13DQ5THJ4 RARRES2P2-201ENST00000394842 485 ntBASIC18.15■□□□□ 0.5
VPS13DQ5THJ4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS13DQ5THJ4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS13DQ5THJ4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.5
VPS13DQ5THJ4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VPS13DQ5THJ4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.14■□□□□ 0.49
VPS13DQ5THJ4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS13DQ5THJ4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS13DQ5THJ4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VPS13DQ5THJ4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VPS13DQ5THJ4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VPS13DQ5THJ4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
VPS13DQ5THJ4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
VPS13DQ5THJ4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS13DQ5THJ4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS13DQ5THJ4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS13DQ5THJ4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.11■□□□□ 0.49
VPS13DQ5THJ4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS13DQ5THJ4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.1■□□□□ 0.49
VPS13DQ5THJ4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.1■□□□□ 0.49
VPS13DQ5THJ4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS13DQ5THJ4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS13DQ5THJ4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
VPS13DQ5THJ4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.1■□□□□ 0.49
VPS13DQ5THJ4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS13DQ5THJ4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.09■□□□□ 0.49
VPS13DQ5THJ4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.09■□□□□ 0.49
VPS13DQ5THJ4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.08■□□□□ 0.49
VPS13DQ5THJ4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VPS13DQ5THJ4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.08■□□□□ 0.48
VPS13DQ5THJ4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS13DQ5THJ4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS13DQ5THJ4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS13DQ5THJ4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS13DQ5THJ4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.07■□□□□ 0.48
VPS13DQ5THJ4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS13DQ5THJ4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS13DQ5THJ4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS13DQ5THJ4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS13DQ5THJ4 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS13DQ5THJ4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS13DQ5THJ4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
VPS13DQ5THJ4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.06■□□□□ 0.48
VPS13DQ5THJ4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS13DQ5THJ4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS13DQ5THJ4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.05■□□□□ 0.48
VPS13DQ5THJ4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
VPS13DQ5THJ4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
VPS13DQ5THJ4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS13DQ5THJ4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS13DQ5THJ4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13DQ5THJ4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13DQ5THJ4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13DQ5THJ4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13DQ5THJ4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13DQ5THJ4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS13DQ5THJ4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS13DQ5THJ4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS13DQ5THJ4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18■□□□□ 0.47
VPS13DQ5THJ4 RNF126P1-201ENST00000567452 1320 ntBASIC18■□□□□ 0.47
VPS13DQ5THJ4 LINC00273-201ENST00000539813 1452 ntBASIC18■□□□□ 0.47
VPS13DQ5THJ4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS13DQ5THJ4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS13DQ5THJ4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 ABHD17AP5-201ENST00000580133 923 ntBASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS13DQ5THJ4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
VPS13DQ5THJ4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS13DQ5THJ4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS13DQ5THJ4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VPS13DQ5THJ4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS13DQ5THJ4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS13DQ5THJ4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.93■□□□□ 0.46
VPS13DQ5THJ4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS13DQ5THJ4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS13DQ5THJ4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS13DQ5THJ4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms