Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
HTRA3P83110 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
HTRA3P83110 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32.05■■■□□ 2.72
HTRA3P83110 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
HTRA3P83110 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.05■■■□□ 2.72
HTRA3P83110 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
HTRA3P83110 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC32.03■■■□□ 2.72
HTRA3P83110 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
HTRA3P83110 RARRES2P1-201ENST00000474487 481 ntBASIC32.02■■■□□ 2.72
HTRA3P83110 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
HTRA3P83110 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
HTRA3P83110 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
HTRA3P83110 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
HTRA3P83110 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.97■■■□□ 2.71
HTRA3P83110 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.96■■■□□ 2.71
HTRA3P83110 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.96■■■□□ 2.71
HTRA3P83110 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.95■■■□□ 2.71
HTRA3P83110 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
HTRA3P83110 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.93■■■□□ 2.7
HTRA3P83110 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
HTRA3P83110 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
HTRA3P83110 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.89■■■□□ 2.7
HTRA3P83110 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.89■■■□□ 2.7
HTRA3P83110 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
HTRA3P83110 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
HTRA3P83110 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.88■■■□□ 2.69
HTRA3P83110 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
HTRA3P83110 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
HTRA3P83110 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
HTRA3P83110 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
HTRA3P83110 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.86■■■□□ 2.69
HTRA3P83110 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
HTRA3P83110 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
HTRA3P83110 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
HTRA3P83110 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
HTRA3P83110 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
HTRA3P83110 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
HTRA3P83110 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.82■■■□□ 2.68
HTRA3P83110 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.82■■■□□ 2.68
HTRA3P83110 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.82■■■□□ 2.68
HTRA3P83110 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
HTRA3P83110 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.81■■■□□ 2.68
HTRA3P83110 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
HTRA3P83110 U85056.1-201ENST00000616429 682 ntBASIC31.81■■■□□ 2.68
HTRA3P83110 AC022413.1-201ENST00000624602 984 ntBASIC31.81■■■□□ 2.68
HTRA3P83110 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
HTRA3P83110 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
HTRA3P83110 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
HTRA3P83110 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
HTRA3P83110 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
HTRA3P83110 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
HTRA3P83110 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
HTRA3P83110 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
HTRA3P83110 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.75■■■□□ 2.67
HTRA3P83110 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
HTRA3P83110 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
HTRA3P83110 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.74■■■□□ 2.67
HTRA3P83110 MIR935-201ENST00000401179 91 ntBASIC31.73■■■□□ 2.67
HTRA3P83110 TSPY13P-201ENST00000338964 914 ntBASIC31.7■■■□□ 2.67
HTRA3P83110 AC004987.1-201ENST00000428627 508 ntBASIC31.69■■■□□ 2.66
HTRA3P83110 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
HTRA3P83110 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
HTRA3P83110 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
HTRA3P83110 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
HTRA3P83110 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.67■■■□□ 2.66
HTRA3P83110 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.67■■■□□ 2.66
HTRA3P83110 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.65■■■□□ 2.66
HTRA3P83110 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.65■■■□□ 2.66
HTRA3P83110 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
HTRA3P83110 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.64■■■□□ 2.66
HTRA3P83110 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.64■■■□□ 2.66
HTRA3P83110 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
HTRA3P83110 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
HTRA3P83110 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
HTRA3P83110 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.63■■■□□ 2.65
HTRA3P83110 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
HTRA3P83110 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
HTRA3P83110 AL035685.1-201ENST00000636663 812 ntBASIC31.62■■■□□ 2.65
HTRA3P83110 ATP5G2P3-201ENST00000429083 425 ntBASIC31.61■■■□□ 2.65
HTRA3P83110 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
HTRA3P83110 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
HTRA3P83110 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
HTRA3P83110 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.57■■■□□ 2.64
HTRA3P83110 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.55■■■□□ 2.64
HTRA3P83110 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
HTRA3P83110 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
HTRA3P83110 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.55■■■□□ 2.64
HTRA3P83110 KRT18P60-201ENST00000312876 1297 ntBASIC31.54■■■□□ 2.64
HTRA3P83110 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.54■■■□□ 2.64
HTRA3P83110 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
HTRA3P83110 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
HTRA3P83110 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.53■■■□□ 2.64
HTRA3P83110 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
HTRA3P83110 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
HTRA3P83110 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.51■■■□□ 2.63
HTRA3P83110 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HTRA3P83110 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HTRA3P83110 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
HTRA3P83110 AL451085.2-201ENST00000605085 799 ntBASIC31.48■■■□□ 2.63
HTRA3P83110 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms