Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DEFA4P12838 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
DEFA4P12838 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DEFA4P12838 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DEFA4P12838 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.04■□□□□ 0.96
DEFA4P12838 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DEFA4P12838 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DEFA4P12838 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
DEFA4P12838 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.02■□□□□ 0.96
DEFA4P12838 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
DEFA4P12838 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
DEFA4P12838 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
DEFA4P12838 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DEFA4P12838 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DEFA4P12838 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DEFA4P12838 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21■□□□□ 0.95
DEFA4P12838 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21■□□□□ 0.95
DEFA4P12838 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
DEFA4P12838 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.99■□□□□ 0.95
DEFA4P12838 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DEFA4P12838 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DEFA4P12838 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
DEFA4P12838 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DEFA4P12838 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.98■□□□□ 0.95
DEFA4P12838 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DEFA4P12838 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DEFA4P12838 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DEFA4P12838 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DEFA4P12838 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
DEFA4P12838 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DEFA4P12838 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
DEFA4P12838 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DEFA4P12838 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.96■□□□□ 0.95
DEFA4P12838 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.95■□□□□ 0.94
DEFA4P12838 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.95■□□□□ 0.94
DEFA4P12838 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DEFA4P12838 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DEFA4P12838 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.93■□□□□ 0.94
DEFA4P12838 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
DEFA4P12838 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DEFA4P12838 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.92■□□□□ 0.94
DEFA4P12838 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DEFA4P12838 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DEFA4P12838 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DEFA4P12838 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DEFA4P12838 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DEFA4P12838 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DEFA4P12838 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DEFA4P12838 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DEFA4P12838 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DEFA4P12838 AL135925.1-201ENST00000605920 1701 ntBASIC20.9■□□□□ 0.94
DEFA4P12838 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DEFA4P12838 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
DEFA4P12838 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DEFA4P12838 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
DEFA4P12838 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DEFA4P12838 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.89■□□□□ 0.93
DEFA4P12838 AC097358.2-201ENST00000607541 1159 ntBASIC20.89■□□□□ 0.93
DEFA4P12838 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DEFA4P12838 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DEFA4P12838 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
DEFA4P12838 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DEFA4P12838 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DEFA4P12838 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
DEFA4P12838 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DEFA4P12838 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DEFA4P12838 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
DEFA4P12838 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DEFA4P12838 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DEFA4P12838 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.85■□□□□ 0.93
DEFA4P12838 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DEFA4P12838 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DEFA4P12838 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
DEFA4P12838 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
DEFA4P12838 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DEFA4P12838 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DEFA4P12838 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DEFA4P12838 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DEFA4P12838 AC142086.6-201ENST00000621154 1765 ntBASIC20.82■□□□□ 0.92
DEFA4P12838 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
DEFA4P12838 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DEFA4P12838 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
DEFA4P12838 AL391121.1-201ENST00000607967 1349 ntBASIC20.81■□□□□ 0.92
DEFA4P12838 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
DEFA4P12838 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DEFA4P12838 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DEFA4P12838 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
DEFA4P12838 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
DEFA4P12838 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DEFA4P12838 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DEFA4P12838 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DEFA4P12838 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.81■□□□□ 0.92
DEFA4P12838 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.81■□□□□ 0.92
DEFA4P12838 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.81■□□□□ 0.92
DEFA4P12838 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DEFA4P12838 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.8■□□□□ 0.92
DEFA4P12838 AC136428.2-201ENST00000563187 214 ntBASIC20.8■□□□□ 0.92
DEFA4P12838 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
DEFA4P12838 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
DEFA4P12838 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms