Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFA4O00483 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFA4O00483 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFA4O00483 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NDUFA4O00483 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFA4O00483 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFA4O00483 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.15■□□□□ 0.82
NDUFA4O00483 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NDUFA4O00483 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFA4O00483 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFA4O00483 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFA4O00483 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFA4O00483 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFA4O00483 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFA4O00483 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA4O00483 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA4O00483 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA4O00483 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA4O00483 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA4O00483 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA4O00483 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA4O00483 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFA4O00483 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFA4O00483 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
NDUFA4O00483 AP006261.1-201ENST00000584783 668 ntBASIC20.12■□□□□ 0.81
NDUFA4O00483 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFA4O00483 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFA4O00483 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFA4O00483 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFA4O00483 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFA4O00483 MIR3665-201ENST00000578708 105 ntBASIC20.11■□□□□ 0.81
NDUFA4O00483 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.11■□□□□ 0.81
NDUFA4O00483 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFA4O00483 ABCB10P3-201ENST00000561950 2166 ntBASIC20.11■□□□□ 0.81
NDUFA4O00483 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.1■□□□□ 0.81
NDUFA4O00483 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NDUFA4O00483 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
NDUFA4O00483 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
NDUFA4O00483 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NDUFA4O00483 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NDUFA4O00483 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
NDUFA4O00483 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NDUFA4O00483 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NDUFA4O00483 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NDUFA4O00483 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NDUFA4O00483 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NDUFA4O00483 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
NDUFA4O00483 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFA4O00483 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFA4O00483 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.07■□□□□ 0.8
NDUFA4O00483 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFA4O00483 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.07■□□□□ 0.8
NDUFA4O00483 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFA4O00483 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.06■□□□□ 0.8
NDUFA4O00483 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFA4O00483 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.06■□□□□ 0.8
NDUFA4O00483 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.06■□□□□ 0.8
NDUFA4O00483 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.06■□□□□ 0.8
NDUFA4O00483 DUX4L28-201ENST00000623687 678 ntBASIC20.06■□□□□ 0.8
NDUFA4O00483 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFA4O00483 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDUFA4O00483 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDUFA4O00483 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
NDUFA4O00483 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NDUFA4O00483 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.04■□□□□ 0.8
NDUFA4O00483 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NDUFA4O00483 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NDUFA4O00483 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.03■□□□□ 0.8
NDUFA4O00483 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFA4O00483 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.03■□□□□ 0.8
NDUFA4O00483 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFA4O00483 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NDUFA4O00483 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFA4O00483 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NDUFA4O00483 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFA4O00483 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.01■□□□□ 0.79
NDUFA4O00483 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.01■□□□□ 0.79
NDUFA4O00483 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20■□□□□ 0.79
NDUFA4O00483 AC108673.1-201ENST00000510422 1159 ntBASIC20■□□□□ 0.79
NDUFA4O00483 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFA4O00483 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.99■□□□□ 0.79
NDUFA4O00483 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFA4O00483 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFA4O00483 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFA4O00483 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFA4O00483 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFA4O00483 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NDUFA4O00483 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NDUFA4O00483 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NDUFA4O00483 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.97■□□□□ 0.79
NDUFA4O00483 AL139393.2-201ENST00000608721 2025 ntBASIC19.97■□□□□ 0.79
NDUFA4O00483 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFA4O00483 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NDUFA4O00483 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFA4O00483 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.96■□□□□ 0.79
NDUFA4O00483 AL162393.1-201ENST00000437852 946 ntBASIC19.96■□□□□ 0.79
NDUFA4O00483 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
NDUFA4O00483 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.95■□□□□ 0.78
NDUFA4O00483 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.95■□□□□ 0.78
NDUFA4O00483 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms