Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM238C9JI98 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM238C9JI98 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM238C9JI98 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM238C9JI98 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM238C9JI98 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM238C9JI98 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM238C9JI98 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM238C9JI98 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TMEM238C9JI98 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM238C9JI98 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.33■□□□□ 0.53
TMEM238C9JI98 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM238C9JI98 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM238C9JI98 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM238C9JI98 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM238C9JI98 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TMEM238C9JI98 AC142086.6-201ENST00000621154 1765 ntBASIC18.32■□□□□ 0.52
TMEM238C9JI98 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM238C9JI98 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM238C9JI98 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TMEM238C9JI98 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM238C9JI98 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM238C9JI98 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM238C9JI98 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM238C9JI98 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM238C9JI98 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM238C9JI98 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM238C9JI98 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM238C9JI98 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
TMEM238C9JI98 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM238C9JI98 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.28■□□□□ 0.52
TMEM238C9JI98 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TMEM238C9JI98 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM238C9JI98 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM238C9JI98 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM238C9JI98 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM238C9JI98 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC18.27■□□□□ 0.52
TMEM238C9JI98 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.27■□□□□ 0.52
TMEM238C9JI98 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM238C9JI98 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TMEM238C9JI98 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM238C9JI98 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM238C9JI98 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM238C9JI98 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.25■□□□□ 0.51
TMEM238C9JI98 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM238C9JI98 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TMEM238C9JI98 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM238C9JI98 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM238C9JI98 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM238C9JI98 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM238C9JI98 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM238C9JI98 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TMEM238C9JI98 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM238C9JI98 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM238C9JI98 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC18.23■□□□□ 0.51
TMEM238C9JI98 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TMEM238C9JI98 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM238C9JI98 INO80B-203ENST00000409917 796 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM238C9JI98 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TMEM238C9JI98 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.21■□□□□ 0.5
TMEM238C9JI98 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM238C9JI98 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM238C9JI98 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM238C9JI98 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM238C9JI98 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
TMEM238C9JI98 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM238C9JI98 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM238C9JI98 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TMEM238C9JI98 ST7-AS1-201ENST00000456775 1889 ntBASIC18.2■□□□□ 0.5
TMEM238C9JI98 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM238C9JI98 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM238C9JI98 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.19■□□□□ 0.5
TMEM238C9JI98 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM238C9JI98 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM238C9JI98 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM238C9JI98 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM238C9JI98 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM238C9JI98 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM238C9JI98 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM238C9JI98 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM238C9JI98 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM238C9JI98 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM238C9JI98 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM238C9JI98 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM238C9JI98 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM238C9JI98 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM238C9JI98 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
TMEM238C9JI98 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM238C9JI98 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM238C9JI98 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TMEM238C9JI98 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TMEM238C9JI98 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TMEM238C9JI98 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM238C9JI98 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM238C9JI98 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM238C9JI98 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM238C9JI98 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TMEM238C9JI98 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TMEM238C9JI98 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM238C9JI98 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms