RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 NISCHQ9Y2I1 1504 aa37.44■■■■□ 3.58
NKX3-2-201ENST00000382438 HRCP23327 699 aa35.9■■■■□ 3.34
NKX3-2-201ENST00000382438 PPARGC1BQ86YN6 1023 aaKnown RBP35.42■■■■□ 3.26
NKX3-2-201ENST00000382438 PELP1Q8IZL8 1130 aaKnown RBP35.4■■■■□ 3.26
NKX3-2-201ENST00000382438 PCGF6Q9BYE7 350 aa35.04■■■■□ 3.2
NKX3-2-201ENST00000382438 SCAF1Q9H7N4 1312 aaKnown RBP34.46■■■■□ 3.11
NKX3-2-201ENST00000382438 SUPT5HO00267 1087 aaKnown RBP34.44■■■■□ 3.1
NKX3-2-201ENST00000382438 MYO15BQ96JP2 1530 aa34.31■■■■□ 3.08
NKX3-2-201ENST00000382438 SHROOM4Q9ULL8 1493 aa34.27■■■■□ 3.08
NKX3-2-201ENST00000382438 MYT1Q01538 1121 aa34.12■■■■□ 3.05
NKX3-2-201ENST00000382438 CHIC1Q5VXU3 224 aa33.93■■■■□ 3.02
NKX3-2-201ENST00000382438 TRIM26Q12899 539 aaPredicted RBP33.51■■■□□ 2.96
NKX3-2-201ENST00000382438 DCAF1Q9Y4B6 1507 aa33.47■■■□□ 2.95
NKX3-2-201ENST00000382438 LOC105371045A0A1W2PR82 267 aa33.43■■■□□ 2.94
NKX3-2-201ENST00000382438 ZEB1P37275 1124 aaPredicted RBP33.33■■■□□ 2.93
NKX3-2-201ENST00000382438 ACIN1Q9UKV3 1341 aaKnown RBP33.31■■■□□ 2.92
NKX3-2-201ENST00000382438 NEUROD1Q13562 356 aa33.3■■■□□ 2.92
NKX3-2-201ENST00000382438 GTF3C3Q9Y5Q9 886 aa33.19■■■□□ 2.9
NKX3-2-201ENST00000382438 CCDC180Q9P1Z9 1646 aa33.15■■■□□ 2.9
NKX3-2-201ENST00000382438 CENPBP07199 599 aaPredicted RBP32.73■■■□□ 2.83
NKX3-2-201ENST00000382438 DIEXFQ68CQ4 756 aaKnown RBP32.43■■■□□ 2.78
NKX3-2-201ENST00000382438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.26■■■□□ 2.75
NKX3-2-201ENST00000382438 BCL11AQ9H165 835 aa32.22■■■□□ 2.75
NKX3-2-201ENST00000382438 YTHDC1Q96MU7 727 aaKnown RBP32.19■■■□□ 2.74
NKX3-2-201ENST00000382438 CCER1Q8TC90 406 aaPredicted RBP32.13■■■□□ 2.73
NKX3-2-201ENST00000382438 TTBK1Q5TCY1 1321 aaPredicted RBP32.1■■■□□ 2.73
NKX3-2-201ENST00000382438 FAM9AQ8IZU1 332 aaPredicted RBP32.03■■■□□ 2.72
NKX3-2-201ENST00000382438 EHMT2Q96KQ7 1210 aa32.01■■■□□ 2.72
NKX3-2-201ENST00000382438 ZCCHC6Q5VYS8 1495 aaKnown RBP31.92■■■□□ 2.7
NKX3-2-201ENST00000382438 DCAF8L2P0C7V8 631 aa31.77■■■□□ 2.68
NKX3-2-201ENST00000382438 TRIM41Q8WV44 630 aa31.76■■■□□ 2.68
NKX3-2-201ENST00000382438 ANP32EQ9BTT0 268 aa31.75■■■□□ 2.67
NKX3-2-201ENST00000382438 MIER1Q8N108 512 aa31.6■■■□□ 2.65
NKX3-2-201ENST00000382438 ZNF316A6NFI3 1004 aaPredicted RBP31.57■■■□□ 2.65
NKX3-2-201ENST00000382438 CSRNP3Q8WYN3 585 aa31.56■■■□□ 2.64
NKX3-2-201ENST00000382438 TSHZ2Q9NRE2 1034 aa31.41■■■□□ 2.62
NKX3-2-201ENST00000382438 PRKCSHP14314 528 aaPredicted RBP31.37■■■□□ 2.61
NKX3-2-201ENST00000382438 SUPT16HQ9Y5B9 1047 aaKnown RBP31.35■■■□□ 2.61
NKX3-2-201ENST00000382438 CLSPNQ9HAW4 1339 aa30.89■■■□□ 2.54
NKX3-2-201ENST00000382438 BCANQ96GW7 911 aa30.81■■■□□ 2.52
NKX3-2-201ENST00000382438 RBM19Q9Y4C8 960 aaKnown RBP30.62■■■□□ 2.49
NKX3-2-201ENST00000382438 RSF1Q96T23 1441 aaPredicted RBP30.54■■■□□ 2.48
NKX3-2-201ENST00000382438 HNRNPUL2Q1KMD3 747 aaKnown RBP30.54■■■□□ 2.48
NKX3-2-201ENST00000382438 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
NKX3-2-201ENST00000382438 MSH5O43196 834 aa30.46■■■□□ 2.47
NKX3-2-201ENST00000382438 FKBP8Q14318 412 aa30.46■■■□□ 2.47
NKX3-2-201ENST00000382438 ABCC9O60706 1549 aa30.43■■■□□ 2.46
NKX3-2-201ENST00000382438 ERICH6Q7L0X2 663 aa30.42■■■□□ 2.46
NKX3-2-201ENST00000382438 WRNQ14191 1432 aaPredicted RBP eCLIP30.36■■■□□ 2.454e-7■■■■■ 101.5
NKX3-2-201ENST00000382438 KCNH8Q96L42 1107 aa30.35■■■□□ 2.45
NKX3-2-201ENST00000382438 ITGAEP38570 1179 aa30.32■■■□□ 2.45
NKX3-2-201ENST00000382438 ANO8Q9HCE9 1232 aaPredicted RBP30.28■■■□□ 2.44
NKX3-2-201ENST00000382438 CEP162Q5TB80 1403 aa30.23■■■□□ 2.43
NKX3-2-201ENST00000382438 DEKP35659 375 aaKnown RBP30.07■■■□□ 2.4
NKX3-2-201ENST00000382438 APLP2Q06481 763 aa30.05■■■□□ 2.4
NKX3-2-201ENST00000382438 NEFLP07196 543 aa30.04■■■□□ 2.4
NKX3-2-201ENST00000382438 UBTFP17480 764 aaKnown RBP29.98■■■□□ 2.39
NKX3-2-201ENST00000382438 FANCIQ9NVI1 1328 aa29.9■■■□□ 2.38
NKX3-2-201ENST00000382438 SALL2Q9Y467 1007 aaPredicted RBP29.9■■■□□ 2.38
NKX3-2-201ENST00000382438 TNIKQ9UKE5 1360 aa29.88■■■□□ 2.37
NKX3-2-201ENST00000382438 CCDC136Q96JN2 1154 aa29.82■■■□□ 2.36
NKX3-2-201ENST00000382438 TRIM52Q96A61 297 aa29.81■■■□□ 2.36
NKX3-2-201ENST00000382438 MYT1LQ9UL68 1186 aa29.76■■■□□ 2.35
NKX3-2-201ENST00000382438 DHX57Q6P158 1386 aaKnown RBP29.72■■■□□ 2.35
NKX3-2-201ENST00000382438 SOGA1O94964 1423 aa29.7■■■□□ 2.35
NKX3-2-201ENST00000382438 CCDC88BA6NC98 1476 aa29.7■■■□□ 2.35
NKX3-2-201ENST00000382438 CDK11AQ9UQ88 783 aaPredicted RBP29.7■■■□□ 2.35
NKX3-2-201ENST00000382438 ABCC8Q09428 1581 aa29.69■■■□□ 2.34
NKX3-2-201ENST00000382438 NBR1Q14596 966 aa29.69■■■□□ 2.34
NKX3-2-201ENST00000382438 SCRIBQ14160 1630 aa29.69■■■□□ 2.34
NKX3-2-201ENST00000382438 IRX6P78412 446 aaPredicted RBP29.65■■■□□ 2.34
NKX3-2-201ENST00000382438 DDX10Q13206 875 aaKnown RBP29.64■■■□□ 2.34
NKX3-2-201ENST00000382438 RTN4Q9NQC3 1192 aaKnown RBP29.54■■■□□ 2.32
NKX3-2-201ENST00000382438 RUSC2Q8N2Y8 1516 aa29.53■■■□□ 2.32
NKX3-2-201ENST00000382438 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.53■■■□□ 2.32
NKX3-2-201ENST00000382438 CECR2Q9BXF3 1484 aa29.53■■■□□ 2.32
NKX3-2-201ENST00000382438 IL27Q8NEV9 243 aa29.49■■■□□ 2.31
NKX3-2-201ENST00000382438 MROH2BQ7Z745 1585 aa29.46■■■□□ 2.31
NKX3-2-201ENST00000382438 ERICH6BQ5W0A0 696 aa29.45■■■□□ 2.31
NKX3-2-201ENST00000382438 RANGAP1P46060 587 aaPredicted RBP29.45■■■□□ 2.3
NKX3-2-201ENST00000382438 PAK3O75914 559 aaPredicted RBP29.42■■■□□ 2.3
NKX3-2-201ENST00000382438 WIZO95785 1651 aa29.4■■■□□ 2.3
NKX3-2-201ENST00000382438 NOP58Q9Y2X3 529 aaKnown RBP29.37■■■□□ 2.29
NKX3-2-201ENST00000382438 EIF4G1Q04637 1599 aaKnown RBP29.37■■■□□ 2.29
NKX3-2-201ENST00000382438 GOLGA3Q08378 1498 aa29.36■■■□□ 2.29
NKX3-2-201ENST00000382438 UBE2Q2Q8WVN8 375 aa29.35■■■□□ 2.29
NKX3-2-201ENST00000382438 HIRIP3Q9BW71 556 aaPredicted RBP29.35■■■□□ 2.29
NKX3-2-201ENST00000382438 CLIP1P30622 1438 aa29.33■■■□□ 2.29
NKX3-2-201ENST00000382438 PPP1R15AO75807 674 aaPredicted RBP29.26■■■□□ 2.27
NKX3-2-201ENST00000382438 VPS8Q8N3P4 1428 aa29.25■■■□□ 2.27
NKX3-2-201ENST00000382438 ANP32CO43423 234 aa29.25■■■□□ 2.27
NKX3-2-201ENST00000382438 CCER2I3L3R5 266 aa29.22■■■□□ 2.27
NKX3-2-201ENST00000382438 RTL5Q5HYW3 569 aaPredicted RBP29.2■■■□□ 2.26
NKX3-2-201ENST00000382438 EEA1Q15075 1411 aa29.19■■■□□ 2.26
NKX3-2-201ENST00000382438 NACADO15069 1562 aa29.17■■■□□ 2.26
NKX3-2-201ENST00000382438 HNRNPUQ00839 825 aaKnown RBP eCLIP29.16■■■□□ 2.26
NKX3-2-201ENST00000382438 B4GALNT3Q6L9W6 998 aa29.16■■■□□ 2.26
NKX3-2-201ENST00000382438 PPP4R2Q9NY27 417 aa29.12■■■□□ 2.25
NKX3-2-201ENST00000382438 KANK4Q5T7N3 995 aaPredicted RBP29.05■■■□□ 2.24
NKX3-2-201ENST00000382438 SIN3AQ96ST3 1273 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms