Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV8-4A0A0B4J246 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAV8-4A0A0B4J246 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV8-4A0A0B4J246 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-4A0A0B4J246 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRAV8-4A0A0B4J246 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-4A0A0B4J246 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV8-4A0A0B4J246 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-4A0A0B4J246 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-4A0A0B4J246 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRAV8-4A0A0B4J246 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-4A0A0B4J246 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-4A0A0B4J246 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-4A0A0B4J246 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-4A0A0B4J246 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRAV8-4A0A0B4J246 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-4A0A0B4J246 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV8-4A0A0B4J246 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV8-4A0A0B4J246 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-4A0A0B4J246 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
TRAV8-4A0A0B4J246 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TRAV8-4A0A0B4J246 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-4A0A0B4J246 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV8-4A0A0B4J246 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-4A0A0B4J246 SETD8P1-201ENST00000623146 1180 ntBASIC18.01■□□□□ 0.47
TRAV8-4A0A0B4J246 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-4A0A0B4J246 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-4A0A0B4J246 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-4A0A0B4J246 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-4A0A0B4J246 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-4A0A0B4J246 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-4A0A0B4J246 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-4A0A0B4J246 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-4A0A0B4J246 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-4A0A0B4J246 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-4A0A0B4J246 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-4A0A0B4J246 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-4A0A0B4J246 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-4A0A0B4J246 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-4A0A0B4J246 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-4A0A0B4J246 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-4A0A0B4J246 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-4A0A0B4J246 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-4A0A0B4J246 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-4A0A0B4J246 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-4A0A0B4J246 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV8-4A0A0B4J246 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-4A0A0B4J246 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRAV8-4A0A0B4J246 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-4A0A0B4J246 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV8-4A0A0B4J246 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRAV8-4A0A0B4J246 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV8-4A0A0B4J246 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRAV8-4A0A0B4J246 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRAV8-4A0A0B4J246 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV8-4A0A0B4J246 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV8-4A0A0B4J246 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-4A0A0B4J246 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-4A0A0B4J246 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-4A0A0B4J246 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-4A0A0B4J246 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-4A0A0B4J246 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-4A0A0B4J246 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-4A0A0B4J246 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV8-4A0A0B4J246 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
TRAV8-4A0A0B4J246 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-4A0A0B4J246 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-4A0A0B4J246 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-4A0A0B4J246 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.89■□□□□ 0.46
TRAV8-4A0A0B4J246 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV8-4A0A0B4J246 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV8-4A0A0B4J246 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV8-4A0A0B4J246 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-4A0A0B4J246 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-4A0A0B4J246 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV8-4A0A0B4J246 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV8-4A0A0B4J246 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-4A0A0B4J246 ST7-AS1-201ENST00000456775 1889 ntBASIC17.88■□□□□ 0.45
TRAV8-4A0A0B4J246 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRAV8-4A0A0B4J246 AL135925.1-201ENST00000605920 1701 ntBASIC17.87■□□□□ 0.45
TRAV8-4A0A0B4J246 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV8-4A0A0B4J246 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV8-4A0A0B4J246 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV8-4A0A0B4J246 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV8-4A0A0B4J246 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV8-4A0A0B4J246 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV8-4A0A0B4J246 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-4A0A0B4J246 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
TRAV8-4A0A0B4J246 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV8-4A0A0B4J246 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV8-4A0A0B4J246 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRAV8-4A0A0B4J246 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV8-4A0A0B4J246 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV8-4A0A0B4J246 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC17.85■□□□□ 0.45
TRAV8-4A0A0B4J246 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-4A0A0B4J246 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
TRAV8-4A0A0B4J246 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TRAV8-4A0A0B4J246 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-4A0A0B4J246 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-4A0A0B4J246 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms