Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV7-1A0A0A6YYK4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV7-1A0A0A6YYK4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV7-1A0A0A6YYK4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.4■□□□□ 0.86
TRBV7-1A0A0A6YYK4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV7-1A0A0A6YYK4 AC005559.1-201ENST00000589661 871 ntBASIC20.39■□□□□ 0.85
TRBV7-1A0A0A6YYK4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TRBV7-1A0A0A6YYK4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV7-1A0A0A6YYK4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV7-1A0A0A6YYK4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV7-1A0A0A6YYK4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV7-1A0A0A6YYK4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV7-1A0A0A6YYK4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV7-1A0A0A6YYK4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV7-1A0A0A6YYK4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV7-1A0A0A6YYK4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV7-1A0A0A6YYK4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV7-1A0A0A6YYK4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV7-1A0A0A6YYK4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV7-1A0A0A6YYK4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
TRBV7-1A0A0A6YYK4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
TRBV7-1A0A0A6YYK4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV7-1A0A0A6YYK4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRBV7-1A0A0A6YYK4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV7-1A0A0A6YYK4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV7-1A0A0A6YYK4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV7-1A0A0A6YYK4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV7-1A0A0A6YYK4 ABCB10P3-201ENST00000561950 2166 ntBASIC20.34■□□□□ 0.85
TRBV7-1A0A0A6YYK4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV7-1A0A0A6YYK4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV7-1A0A0A6YYK4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV7-1A0A0A6YYK4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.33■□□□□ 0.85
TRBV7-1A0A0A6YYK4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
TRBV7-1A0A0A6YYK4 AP006261.1-201ENST00000584783 668 ntBASIC20.33■□□□□ 0.85
TRBV7-1A0A0A6YYK4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV7-1A0A0A6YYK4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
TRBV7-1A0A0A6YYK4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.33■□□□□ 0.84
TRBV7-1A0A0A6YYK4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV7-1A0A0A6YYK4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV7-1A0A0A6YYK4 MIR3665-201ENST00000578708 105 ntBASIC20.32■□□□□ 0.84
TRBV7-1A0A0A6YYK4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV7-1A0A0A6YYK4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TRBV7-1A0A0A6YYK4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV7-1A0A0A6YYK4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
TRBV7-1A0A0A6YYK4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV7-1A0A0A6YYK4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV7-1A0A0A6YYK4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TRBV7-1A0A0A6YYK4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV7-1A0A0A6YYK4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV7-1A0A0A6YYK4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TRBV7-1A0A0A6YYK4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV7-1A0A0A6YYK4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV7-1A0A0A6YYK4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.29■□□□□ 0.84
TRBV7-1A0A0A6YYK4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.29■□□□□ 0.84
TRBV7-1A0A0A6YYK4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV7-1A0A0A6YYK4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV7-1A0A0A6YYK4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV7-1A0A0A6YYK4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRBV7-1A0A0A6YYK4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV7-1A0A0A6YYK4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV7-1A0A0A6YYK4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV7-1A0A0A6YYK4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
TRBV7-1A0A0A6YYK4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.27■□□□□ 0.84
TRBV7-1A0A0A6YYK4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.27■□□□□ 0.84
TRBV7-1A0A0A6YYK4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.27■□□□□ 0.84
TRBV7-1A0A0A6YYK4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV7-1A0A0A6YYK4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV7-1A0A0A6YYK4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.26■□□□□ 0.83
TRBV7-1A0A0A6YYK4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.25■□□□□ 0.83
TRBV7-1A0A0A6YYK4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.25■□□□□ 0.83
TRBV7-1A0A0A6YYK4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRBV7-1A0A0A6YYK4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV7-1A0A0A6YYK4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.24■□□□□ 0.83
TRBV7-1A0A0A6YYK4 DUX4L28-201ENST00000623687 678 ntBASIC20.24■□□□□ 0.83
TRBV7-1A0A0A6YYK4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.24■□□□□ 0.83
TRBV7-1A0A0A6YYK4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRBV7-1A0A0A6YYK4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV7-1A0A0A6YYK4 AC108673.1-201ENST00000510422 1159 ntBASIC20.23■□□□□ 0.83
TRBV7-1A0A0A6YYK4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV7-1A0A0A6YYK4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV7-1A0A0A6YYK4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.22■□□□□ 0.83
TRBV7-1A0A0A6YYK4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV7-1A0A0A6YYK4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV7-1A0A0A6YYK4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV7-1A0A0A6YYK4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.21■□□□□ 0.83
TRBV7-1A0A0A6YYK4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.21■□□□□ 0.83
TRBV7-1A0A0A6YYK4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV7-1A0A0A6YYK4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV7-1A0A0A6YYK4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV7-1A0A0A6YYK4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV7-1A0A0A6YYK4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV7-1A0A0A6YYK4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.19■□□□□ 0.82
TRBV7-1A0A0A6YYK4 AL139393.2-201ENST00000608721 2025 ntBASIC20.19■□□□□ 0.82
TRBV7-1A0A0A6YYK4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV7-1A0A0A6YYK4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV7-1A0A0A6YYK4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV7-1A0A0A6YYK4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.17■□□□□ 0.82
TRBV7-1A0A0A6YYK4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV7-1A0A0A6YYK4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TRBV7-1A0A0A6YYK4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms