Protein–RNA interactions for Protein: A0A087WSY6

IGKV3D-15, Immunoglobulin kappa variable 3D-15, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-15A0A087WSY6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
IGKV3D-15A0A087WSY6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
IGKV3D-15A0A087WSY6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
IGKV3D-15A0A087WSY6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
IGKV3D-15A0A087WSY6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
IGKV3D-15A0A087WSY6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
IGKV3D-15A0A087WSY6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
IGKV3D-15A0A087WSY6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.37■■□□□ 1.33
IGKV3D-15A0A087WSY6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.37■■□□□ 1.33
IGKV3D-15A0A087WSY6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
IGKV3D-15A0A087WSY6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
IGKV3D-15A0A087WSY6 MIR6090-201ENST00000622481 60 ntBASIC23.36■■□□□ 1.33
IGKV3D-15A0A087WSY6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.36■■□□□ 1.33
IGKV3D-15A0A087WSY6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.35■■□□□ 1.33
IGKV3D-15A0A087WSY6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
IGKV3D-15A0A087WSY6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
IGKV3D-15A0A087WSY6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.35■■□□□ 1.33
IGKV3D-15A0A087WSY6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
IGKV3D-15A0A087WSY6 ST7-AS1-201ENST00000456775 1889 ntBASIC23.34■■□□□ 1.33
IGKV3D-15A0A087WSY6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
IGKV3D-15A0A087WSY6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
IGKV3D-15A0A087WSY6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
IGKV3D-15A0A087WSY6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
IGKV3D-15A0A087WSY6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
IGKV3D-15A0A087WSY6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
IGKV3D-15A0A087WSY6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
IGKV3D-15A0A087WSY6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
IGKV3D-15A0A087WSY6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.31■■□□□ 1.32
IGKV3D-15A0A087WSY6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
IGKV3D-15A0A087WSY6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
IGKV3D-15A0A087WSY6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
IGKV3D-15A0A087WSY6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
IGKV3D-15A0A087WSY6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
IGKV3D-15A0A087WSY6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.3■■□□□ 1.32
IGKV3D-15A0A087WSY6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
IGKV3D-15A0A087WSY6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
IGKV3D-15A0A087WSY6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.29■■□□□ 1.32
IGKV3D-15A0A087WSY6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.28■■□□□ 1.32
IGKV3D-15A0A087WSY6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.27■■□□□ 1.32
IGKV3D-15A0A087WSY6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
IGKV3D-15A0A087WSY6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
IGKV3D-15A0A087WSY6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
IGKV3D-15A0A087WSY6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
IGKV3D-15A0A087WSY6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
IGKV3D-15A0A087WSY6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
IGKV3D-15A0A087WSY6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
IGKV3D-15A0A087WSY6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.22■■□□□ 1.31
IGKV3D-15A0A087WSY6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.21■■□□□ 1.31
IGKV3D-15A0A087WSY6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.2■■□□□ 1.3
IGKV3D-15A0A087WSY6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
IGKV3D-15A0A087WSY6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
IGKV3D-15A0A087WSY6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
IGKV3D-15A0A087WSY6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.2■■□□□ 1.3
IGKV3D-15A0A087WSY6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
IGKV3D-15A0A087WSY6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
IGKV3D-15A0A087WSY6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.19■■□□□ 1.3
IGKV3D-15A0A087WSY6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
IGKV3D-15A0A087WSY6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.19■■□□□ 1.3
IGKV3D-15A0A087WSY6 DUX4L29-201ENST00000425409 679 ntBASIC23.19■■□□□ 1.3
IGKV3D-15A0A087WSY6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
IGKV3D-15A0A087WSY6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
IGKV3D-15A0A087WSY6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
IGKV3D-15A0A087WSY6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.18■■□□□ 1.3
IGKV3D-15A0A087WSY6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
IGKV3D-15A0A087WSY6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
IGKV3D-15A0A087WSY6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
IGKV3D-15A0A087WSY6 AC021231.2-201ENST00000594613 730 ntBASIC23.17■■□□□ 1.3
IGKV3D-15A0A087WSY6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
IGKV3D-15A0A087WSY6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
IGKV3D-15A0A087WSY6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
IGKV3D-15A0A087WSY6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.16■■□□□ 1.3
IGKV3D-15A0A087WSY6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.16■■□□□ 1.3
IGKV3D-15A0A087WSY6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
IGKV3D-15A0A087WSY6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
IGKV3D-15A0A087WSY6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
IGKV3D-15A0A087WSY6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.15■■□□□ 1.3
IGKV3D-15A0A087WSY6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.15■■□□□ 1.3
IGKV3D-15A0A087WSY6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
IGKV3D-15A0A087WSY6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
IGKV3D-15A0A087WSY6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
IGKV3D-15A0A087WSY6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
IGKV3D-15A0A087WSY6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
IGKV3D-15A0A087WSY6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
IGKV3D-15A0A087WSY6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
IGKV3D-15A0A087WSY6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.14■■□□□ 1.3
IGKV3D-15A0A087WSY6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.14■■□□□ 1.29
IGKV3D-15A0A087WSY6 AC127502.1-201ENST00000399971 1502 ntBASIC23.13■■□□□ 1.29
IGKV3D-15A0A087WSY6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
IGKV3D-15A0A087WSY6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
IGKV3D-15A0A087WSY6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
IGKV3D-15A0A087WSY6 ABCB10P1-201ENST00000614297 2181 ntBASIC23.11■■□□□ 1.29
IGKV3D-15A0A087WSY6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.11■■□□□ 1.29
IGKV3D-15A0A087WSY6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
IGKV3D-15A0A087WSY6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
IGKV3D-15A0A087WSY6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
IGKV3D-15A0A087WSY6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
IGKV3D-15A0A087WSY6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
IGKV3D-15A0A087WSY6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
IGKV3D-15A0A087WSY6 ABHD17AP4-201ENST00000411545 909 ntBASIC23.09■■□□□ 1.29
IGKV3D-15A0A087WSY6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms