Protein–RNA interactions for Protein: A0A075B6S4

IGKV1D-17, Immunoglobulin kappa variable 1D-17, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-17A0A075B6S4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.03■■□□□ 1.12
IGKV1D-17A0A075B6S4 AP006261.1-201ENST00000584783 668 ntBASIC22.03■■□□□ 1.12
IGKV1D-17A0A075B6S4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
IGKV1D-17A0A075B6S4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
IGKV1D-17A0A075B6S4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
IGKV1D-17A0A075B6S4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
IGKV1D-17A0A075B6S4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
IGKV1D-17A0A075B6S4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
IGKV1D-17A0A075B6S4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
IGKV1D-17A0A075B6S4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
IGKV1D-17A0A075B6S4 MIR3665-201ENST00000578708 105 ntBASIC22.01■■□□□ 1.11
IGKV1D-17A0A075B6S4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.01■■□□□ 1.11
IGKV1D-17A0A075B6S4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IGKV1D-17A0A075B6S4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IGKV1D-17A0A075B6S4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IGKV1D-17A0A075B6S4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IGKV1D-17A0A075B6S4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
IGKV1D-17A0A075B6S4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
IGKV1D-17A0A075B6S4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
IGKV1D-17A0A075B6S4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
IGKV1D-17A0A075B6S4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.99■■□□□ 1.11
IGKV1D-17A0A075B6S4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
IGKV1D-17A0A075B6S4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.98■■□□□ 1.11
IGKV1D-17A0A075B6S4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IGKV1D-17A0A075B6S4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
IGKV1D-17A0A075B6S4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
IGKV1D-17A0A075B6S4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
IGKV1D-17A0A075B6S4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.97■■□□□ 1.11
IGKV1D-17A0A075B6S4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.97■■□□□ 1.11
IGKV1D-17A0A075B6S4 AL162393.1-201ENST00000437852 946 ntBASIC21.97■■□□□ 1.11
IGKV1D-17A0A075B6S4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
IGKV1D-17A0A075B6S4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
IGKV1D-17A0A075B6S4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.96■■□□□ 1.11
IGKV1D-17A0A075B6S4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
IGKV1D-17A0A075B6S4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
IGKV1D-17A0A075B6S4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.95■■□□□ 1.1
IGKV1D-17A0A075B6S4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.95■■□□□ 1.1
IGKV1D-17A0A075B6S4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
IGKV1D-17A0A075B6S4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
IGKV1D-17A0A075B6S4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
IGKV1D-17A0A075B6S4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
IGKV1D-17A0A075B6S4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
IGKV1D-17A0A075B6S4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
IGKV1D-17A0A075B6S4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
IGKV1D-17A0A075B6S4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IGKV1D-17A0A075B6S4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.92■■□□□ 1.1
IGKV1D-17A0A075B6S4 ABCB10P3-201ENST00000561950 2166 ntBASIC21.92■■□□□ 1.1
IGKV1D-17A0A075B6S4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
IGKV1D-17A0A075B6S4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
IGKV1D-17A0A075B6S4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
IGKV1D-17A0A075B6S4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IGKV1D-17A0A075B6S4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IGKV1D-17A0A075B6S4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IGKV1D-17A0A075B6S4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.91■■□□□ 1.1
IGKV1D-17A0A075B6S4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
IGKV1D-17A0A075B6S4 AC087741.3-201ENST00000624270 1347 ntBASIC21.9■■□□□ 1.1
IGKV1D-17A0A075B6S4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
IGKV1D-17A0A075B6S4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
IGKV1D-17A0A075B6S4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
IGKV1D-17A0A075B6S4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IGKV1D-17A0A075B6S4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.88■■□□□ 1.09
IGKV1D-17A0A075B6S4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.88■■□□□ 1.09
IGKV1D-17A0A075B6S4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IGKV1D-17A0A075B6S4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.88■■□□□ 1.09
IGKV1D-17A0A075B6S4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IGKV1D-17A0A075B6S4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
IGKV1D-17A0A075B6S4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
IGKV1D-17A0A075B6S4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
IGKV1D-17A0A075B6S4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
IGKV1D-17A0A075B6S4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
IGKV1D-17A0A075B6S4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
IGKV1D-17A0A075B6S4 AC139426.1-201ENST00000568218 2529 ntBASIC21.85■■□□□ 1.09
IGKV1D-17A0A075B6S4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.85■■□□□ 1.09
IGKV1D-17A0A075B6S4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.85■■□□□ 1.09
IGKV1D-17A0A075B6S4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
IGKV1D-17A0A075B6S4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
IGKV1D-17A0A075B6S4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IGKV1D-17A0A075B6S4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
IGKV1D-17A0A075B6S4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
IGKV1D-17A0A075B6S4 AC108673.1-201ENST00000510422 1159 ntBASIC21.84■■□□□ 1.09
IGKV1D-17A0A075B6S4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
IGKV1D-17A0A075B6S4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IGKV1D-17A0A075B6S4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
IGKV1D-17A0A075B6S4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
IGKV1D-17A0A075B6S4 MIR6090-201ENST00000622481 60 ntBASIC21.83■■□□□ 1.09
IGKV1D-17A0A075B6S4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IGKV1D-17A0A075B6S4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
IGKV1D-17A0A075B6S4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IGKV1D-17A0A075B6S4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
IGKV1D-17A0A075B6S4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IGKV1D-17A0A075B6S4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
IGKV1D-17A0A075B6S4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
IGKV1D-17A0A075B6S4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
IGKV1D-17A0A075B6S4 RPS2P35-201ENST00000443417 897 ntBASIC21.8■■□□□ 1.08
IGKV1D-17A0A075B6S4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.8■■□□□ 1.08
IGKV1D-17A0A075B6S4 AC127502.1-201ENST00000399971 1502 ntBASIC21.8■■□□□ 1.08
IGKV1D-17A0A075B6S4 AC044849.2-201ENST00000606596 710 ntBASIC21.79■■□□□ 1.08
IGKV1D-17A0A075B6S4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IGKV1D-17A0A075B6S4 AL139393.2-201ENST00000608721 2025 ntBASIC21.79■■□□□ 1.08
IGKV1D-17A0A075B6S4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms