Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 AL020996.1-203ENST00000536896 2307 ntBASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 AC016769.1-201ENST00000409132 1010 ntBASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 SLC7A5P1-201ENST00000568957 537 ntBASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV23-1A0A0A0MS06 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV23-1A0A0A0MS06 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV23-1A0A0A0MS06 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV23-1A0A0A0MS06 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV23-1A0A0A0MS06 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV23-1A0A0A0MS06 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRBV23-1A0A0A0MS06 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.33■□□□□ 0.37
TRBV23-1A0A0A0MS06 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV23-1A0A0A0MS06 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV23-1A0A0A0MS06 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV23-1A0A0A0MS06 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV23-1A0A0A0MS06 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.33■□□□□ 0.36
TRBV23-1A0A0A0MS06 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.33■□□□□ 0.36
TRBV23-1A0A0A0MS06 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.33■□□□□ 0.36
TRBV23-1A0A0A0MS06 AC022517.1-201ENST00000592429 346 ntBASIC17.33■□□□□ 0.36
TRBV23-1A0A0A0MS06 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.33■□□□□ 0.36
TRBV23-1A0A0A0MS06 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV23-1A0A0A0MS06 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.33■□□□□ 0.36
TRBV23-1A0A0A0MS06 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV23-1A0A0A0MS06 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV23-1A0A0A0MS06 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV23-1A0A0A0MS06 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV23-1A0A0A0MS06 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRBV23-1A0A0A0MS06 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 AC006015.1-201ENST00000429970 570 ntBASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 MYCNOS-205ENST00000641950 531 ntBASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms