RNA–Protein interactions for RNA: ENST00000598564.5

SH3GL1-206, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

TSL 2 BASIC

Gene SH3GL1, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-206ENST00000598564 NISCHQ9Y2I1 1504 aa48.27■■■■■ 5.32
SH3GL1-206ENST00000598564 CCDC180Q9P1Z9 1646 aa42.42■■■■■ 4.38
SH3GL1-206ENST00000598564 ABCC9O60706 1549 aa40.46■■■■■ 4.07
SH3GL1-206ENST00000598564 ZCCHC6Q5VYS8 1495 aaKnown RBP40.44■■■■■ 4.06
SH3GL1-206ENST00000598564 DCAF8L2P0C7V8 631 aa40.04■■■■■ 4
SH3GL1-206ENST00000598564 DCAF1Q9Y4B6 1507 aa39.99■■■■□ 3.99
SH3GL1-206ENST00000598564 MYO15BQ96JP2 1530 aa39.75■■■■□ 3.95
SH3GL1-206ENST00000598564 NACADO15069 1562 aa39.64■■■■□ 3.94
SH3GL1-206ENST00000598564 RB1CC1Q8TDY2 1594 aa39.44■■■■□ 3.9
SH3GL1-206ENST00000598564 SHROOM4Q9ULL8 1493 aa38.9■■■■□ 3.82
SH3GL1-206ENST00000598564 SCRIBQ14160 1630 aa38.82■■■■□ 3.8
SH3GL1-206ENST00000598564 UNC13AQ9UPW8 1703 aa38.45■■■■□ 3.74
SH3GL1-206ENST00000598564 BICRAQ9NZM4 1560 aa38.08■■■■□ 3.69
SH3GL1-206ENST00000598564 PABPN1Q86U42 306 aaKnown RBP eCLIP38.01■■■■□ 3.68
SH3GL1-206ENST00000598564 CECR2Q9BXF3 1484 aa37.44■■■■□ 3.58
SH3GL1-206ENST00000598564 BAZ1AQ9NRL2 1556 aaPredicted RBP37.38■■■■□ 3.58
SH3GL1-206ENST00000598564 SUPT5HO00267 1087 aaKnown RBP37.23■■■■□ 3.55
SH3GL1-206ENST00000598564 SMARCA4P51532 1647 aa37.21■■■■□ 3.55
SH3GL1-206ENST00000598564 RSF1Q96T23 1441 aaPredicted RBP37.2■■■■□ 3.55
SH3GL1-206ENST00000598564 MROH2BQ7Z745 1585 aa37.2■■■■□ 3.55
SH3GL1-206ENST00000598564 EIF4G1Q04637 1599 aaKnown RBP37.06■■■■□ 3.52
SH3GL1-206ENST00000598564 WIZO95785 1651 aa36.87■■■■□ 3.49
SH3GL1-206ENST00000598564 PEG3Q9GZU2 1588 aa36.82■■■■□ 3.48
SH3GL1-206ENST00000598564 SMARCA2P51531 1590 aa36.79■■■■□ 3.48
SH3GL1-206ENST00000598564 ATAD2BQ9ULI0 1458 aa36.73■■■■□ 3.47
SH3GL1-206ENST00000598564 CC2D2AQ9P2K1 1620 aa36.63■■■■□ 3.45
SH3GL1-206ENST00000598564 TOP2AP11388 1531 aaKnown RBP36.57■■■■□ 3.44
SH3GL1-206ENST00000598564 BAZ1BQ9UIG0 1483 aaKnown RBP36.55■■■■□ 3.44
SH3GL1-206ENST00000598564 NCAPD3P42695 1498 aa36.54■■■■□ 3.44
SH3GL1-206ENST00000598564 HMGXB3Q12766 1538 aa36.48■■■■□ 3.43
SH3GL1-206ENST00000598564 CCDC88BA6NC98 1476 aa36.12■■■■□ 3.37
SH3GL1-206ENST00000598564 DNAJC5BQ9UF47 199 aa36.02■■■■□ 3.36
SH3GL1-206ENST00000598564 CFTRP13569 1480 aa35.58■■■■□ 3.29
SH3GL1-206ENST00000598564 CADPSQ9ULU8 1353 aa35.58■■■■□ 3.29
SH3GL1-206ENST00000598564 LAMC3Q9Y6N6 1575 aa35.43■■■■□ 3.26
SH3GL1-206ENST00000598564 PRDM2Q13029 1718 aa35.39■■■■□ 3.26
SH3GL1-206ENST00000598564 CHIC1Q5VXU3 224 aa35.34■■■■□ 3.25
SH3GL1-206ENST00000598564 NESP48681 1621 aa35.3■■■■□ 3.24
SH3GL1-206ENST00000598564 PDS5BQ9NTI5 1447 aa35.21■■■■□ 3.23
SH3GL1-206ENST00000598564 FANCD2Q9BXW9 1451 aa35.17■■■■□ 3.22
SH3GL1-206ENST00000598564 ABCC8Q09428 1581 aa35.15■■■■□ 3.22
SH3GL1-206ENST00000598564 TRIM41Q8WV44 630 aa35.14■■■■□ 3.22
SH3GL1-206ENST00000598564 WRNQ14191 1432 aaPredicted RBP eCLIP35.1■■■■□ 3.21
SH3GL1-206ENST00000598564 CEP164Q9UPV0 1460 aa35.04■■■■□ 3.2
SH3GL1-206ENST00000598564 KIF21AQ7Z4S6 1674 aa34.92■■■■□ 3.18
SH3GL1-206ENST00000598564 SYNJ1O43426 1573 aa34.88■■■■□ 3.17
SH3GL1-206ENST00000598564 TOP2BQ02880 1626 aa34.87■■■■□ 3.17
SH3GL1-206ENST00000598564 ERCC6Q03468 1493 aa34.87■■■■□ 3.17
SH3GL1-206ENST00000598564 CUX1P39880 1505 aa34.83■■■■□ 3.17
SH3GL1-206ENST00000598564 BIVM-ERCC5R4GMW8 1640 aa34.83■■■■□ 3.17
SH3GL1-206ENST00000598564 DNMBPQ6XZF7 1577 aa34.77■■■■□ 3.16
SH3GL1-206ENST00000598564 MRC2Q9UBG0 1479 aa34.73■■■■□ 3.15
SH3GL1-206ENST00000598564 TOPBP1Q92547 1522 aa34.7■■■■□ 3.15
SH3GL1-206ENST00000598564 URB2Q14146 1524 aaKnown RBP34.68■■■■□ 3.14
SH3GL1-206ENST00000598564 FGD5Q6ZNL6 1462 aa34.58■■■■□ 3.13
SH3GL1-206ENST00000598564 WDR62O43379 1518 aa34.54■■■■□ 3.12
SH3GL1-206ENST00000598564 THOC2Q8NI27 1593 aaKnown RBP34.5■■■■□ 3.11
SH3GL1-206ENST00000598564 POLA1P09884 1462 aaPredicted RBP34.49■■■■□ 3.11
SH3GL1-206ENST00000598564 EEA1Q15075 1411 aa34.43■■■■□ 3.1
SH3GL1-206ENST00000598564 SOGA1O94964 1423 aa34.41■■■■□ 3.1
SH3GL1-206ENST00000598564 FAM9AQ8IZU1 332 aaPredicted RBP34.36■■■■□ 3.09
SH3GL1-206ENST00000598564 RAD54L2Q9Y4B4 1467 aa34.32■■■■□ 3.08
SH3GL1-206ENST00000598564 KIF27Q86VH2 1401 aa34.31■■■■□ 3.08
SH3GL1-206ENST00000598564 ABCA10Q8WWZ4 1543 aa34.3■■■■□ 3.08
SH3GL1-206ENST00000598564 CUX2O14529 1486 aa34.28■■■■□ 3.08
SH3GL1-206ENST00000598564 IFT140Q96RY7 1462 aa34.24■■■■□ 3.07
SH3GL1-206ENST00000598564 RUSC2Q8N2Y8 1516 aa34.23■■■■□ 3.07
SH3GL1-206ENST00000598564 TARBP1Q13395 1621 aaKnown RBP34.2■■■■□ 3.07
SH3GL1-206ENST00000598564 CSRNP3Q8WYN3 585 aa34.19■■■■□ 3.06
SH3GL1-206ENST00000598564 WDR97A6NE52 1622 aa34.17■■■■□ 3.06
SH3GL1-206ENST00000598564 TDRD9Q8NDG6 1382 aaKnown RBP34.07■■■■□ 3.04
SH3GL1-206ENST00000598564 GAPVD1Q14C86 1478 aa34.03■■■■□ 3.04
SH3GL1-206ENST00000598564 ABCA5Q8WWZ7 1642 aa34.03■■■■□ 3.04
SH3GL1-206ENST00000598564 IGF1RP08069 1367 aa33.96■■■■□ 3.03
SH3GL1-206ENST00000598564 ERICH3Q5RHP9 1530 aa33.93■■■■□ 3.02
SH3GL1-206ENST00000598564 ZNF608Q9ULD9 1512 aaPredicted RBP33.93■■■■□ 3.02
SH3GL1-206ENST00000598564 AQRO60306 1485 aaKnown RBP eCLIP33.93■■■■□ 3.024e-7■■■■■ 27.3
SH3GL1-206ENST00000598564 KIF21BO75037 1637 aa33.91■■■■□ 3.02
SH3GL1-206ENST00000598564 LOC105371045A0A1W2PR82 267 aa33.89■■■■□ 3.02
SH3GL1-206ENST00000598564 EIF4G3O43432 1585 aaKnown RBP33.88■■■■□ 3.01
SH3GL1-206ENST00000598564 GRIN2BQ13224 1484 aa33.87■■■■□ 3.01
SH3GL1-206ENST00000598564 PRXQ9BXM0 1461 aa33.86■■■■□ 3.01
SH3GL1-206ENST00000598564 GOLGA3Q08378 1498 aa33.86■■■■□ 3.01
SH3GL1-206ENST00000598564 CUL7Q14999 1698 aa33.85■■■■□ 3.01
SH3GL1-206ENST00000598564 PBRM1Q86U86 1689 aa33.85■■■■□ 3.01
SH3GL1-206ENST00000598564 CARMIL1Q5VZK9 1371 aa33.84■■■■□ 3.01
SH3GL1-206ENST00000598564 EHMT2Q96KQ7 1210 aa33.84■■■■□ 3.01
SH3GL1-206ENST00000598564 RAPGEF2Q9Y4G8 1499 aa33.76■■■■□ 3
SH3GL1-206ENST00000598564 UBTFP17480 764 aaKnown RBP33.74■■■□□ 2.99
SH3GL1-206ENST00000598564 FHAD1B1AJZ9 1412 aa33.68■■■□□ 2.98
SH3GL1-206ENST00000598564 MAGI1Q96QZ7 1491 aaPredicted RBP33.67■■■□□ 2.98
SH3GL1-206ENST00000598564 SNAPC4Q5SXM2 1469 aa33.65■■■□□ 2.98
SH3GL1-206ENST00000598564 ADAMTS12P58397 1594 aa33.64■■■□□ 2.98
SH3GL1-206ENST00000598564 TNIKQ9UKE5 1360 aa33.63■■■□□ 2.97
SH3GL1-206ENST00000598564 SYNJ2O15056 1496 aa33.51■■■□□ 2.96
SH3GL1-206ENST00000598564 CHMP7Q8WUX9 453 aaPredicted RBP33.49■■■□□ 2.95
SH3GL1-206ENST00000598564 FBLN2P98095 1184 aa33.42■■■□□ 2.94
SH3GL1-206ENST00000598564 GRIN2AQ12879 1464 aa33.42■■■□□ 2.94
SH3GL1-206ENST00000598564 CEP162Q5TB80 1403 aa33.37■■■□□ 2.93
SH3GL1-206ENST00000598564 CTTNBP2Q8WZ74 1663 aa33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms