RNA–Protein interactions for RNA: ENST00000503811.5

MATR3-206, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-206ENST00000503811 NISCHQ9Y2I1 1504 aa41.61■■■■■ 4.25
MATR3-206ENST00000503811 SHROOM4Q9ULL8 1493 aa35.9■■■■□ 3.34
MATR3-206ENST00000503811 SUPT5HO00267 1087 aaKnown RBP35.26■■■■□ 3.24
MATR3-206ENST00000503811 ZCCHC6Q5VYS8 1495 aaKnown RBP35.25■■■■□ 3.23
MATR3-206ENST00000503811 CCDC180Q9P1Z9 1646 aa35.12■■■■□ 3.21
MATR3-206ENST00000503811 DCAF8L2P0C7V8 631 aa34.63■■■■□ 3.13
MATR3-206ENST00000503811 MYO15BQ96JP2 1530 aa34.36■■■■□ 3.09
MATR3-206ENST00000503811 CHIC1Q5VXU3 224 aa34.33■■■■□ 3.09
MATR3-206ENST00000503811 DCAF1Q9Y4B6 1507 aa34.01■■■■□ 3.03
MATR3-206ENST00000503811 HRCP23327 699 aa33.64■■■□□ 2.98
MATR3-206ENST00000503811 PCGF6Q9BYE7 350 aa33.56■■■□□ 2.96
MATR3-206ENST00000503811 LOC105371045A0A1W2PR82 267 aa33.43■■■□□ 2.94
MATR3-206ENST00000503811 ABCC9O60706 1549 aa33.31■■■□□ 2.92
MATR3-206ENST00000503811 SCRIBQ14160 1630 aa33.19■■■□□ 2.9
MATR3-206ENST00000503811 PPARGC1BQ86YN6 1023 aaKnown RBP33.1■■■□□ 2.89
MATR3-206ENST00000503811 RSF1Q96T23 1441 aaPredicted RBP33.09■■■□□ 2.89
MATR3-206ENST00000503811 RB1CC1Q8TDY2 1594 aa32.82■■■□□ 2.85
MATR3-206ENST00000503811 TRIM26Q12899 539 aaPredicted RBP32.73■■■□□ 2.83
MATR3-206ENST00000503811 TRIM41Q8WV44 630 aa32.72■■■□□ 2.83
MATR3-206ENST00000503811 FAM9AQ8IZU1 332 aaPredicted RBP32.61■■■□□ 2.81
MATR3-206ENST00000503811 CECR2Q9BXF3 1484 aa32.58■■■□□ 2.81
MATR3-206ENST00000503811 NACADO15069 1562 aa32.45■■■□□ 2.79
MATR3-206ENST00000503811 MROH2BQ7Z745 1585 aa32.45■■■□□ 2.79
MATR3-206ENST00000503811 EHMT2Q96KQ7 1210 aa32.44■■■□□ 2.78
MATR3-206ENST00000503811 WIZO95785 1651 aa32.28■■■□□ 2.76
MATR3-206ENST00000503811 BAZ1AQ9NRL2 1556 aaPredicted RBP32■■■□□ 2.71
MATR3-206ENST00000503811 ZEB1P37275 1124 aaPredicted RBP31.98■■■□□ 2.71
MATR3-206ENST00000503811 EIF4G1Q04637 1599 aaKnown RBP31.91■■■□□ 2.7
MATR3-206ENST00000503811 ABCC8Q09428 1581 aa31.71■■■□□ 2.67
MATR3-206ENST00000503811 TOP2AP11388 1531 aaKnown RBP31.68■■■□□ 2.66
MATR3-206ENST00000503811 CCDC88BA6NC98 1476 aa31.64■■■□□ 2.66
MATR3-206ENST00000503811 SMARCA4P51532 1647 aa31.64■■■□□ 2.66
MATR3-206ENST00000503811 SMARCA2P51531 1590 aa31.56■■■□□ 2.64
MATR3-206ENST00000503811 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.53■■■□□ 2.64
MATR3-206ENST00000503811 UNC13AQ9UPW8 1703 aa31.52■■■□□ 2.64
MATR3-206ENST00000503811 SOGA1O94964 1423 aa31.46■■■□□ 2.63
MATR3-206ENST00000503811 TTBK1Q5TCY1 1321 aaPredicted RBP31.44■■■□□ 2.62
MATR3-206ENST00000503811 CCER1Q8TC90 406 aaPredicted RBP31.36■■■□□ 2.61
MATR3-206ENST00000503811 CEP162Q5TB80 1403 aa31.36■■■□□ 2.61
MATR3-206ENST00000503811 RUSC2Q8N2Y8 1516 aa31.33■■■□□ 2.61
MATR3-206ENST00000503811 PABPN1Q86U42 306 aaKnown RBP eCLIP31.31■■■□□ 2.6
MATR3-206ENST00000503811 WRNQ14191 1432 aaPredicted RBP eCLIP31.3■■■□□ 2.66e-9■■■■■ 30.6
MATR3-206ENST00000503811 SCAF1Q9H7N4 1312 aaKnown RBP31.22■■■□□ 2.59
MATR3-206ENST00000503811 TNIKQ9UKE5 1360 aa31.22■■■□□ 2.59
MATR3-206ENST00000503811 CSRNP3Q8WYN3 585 aa31.2■■■□□ 2.59
MATR3-206ENST00000503811 UBTFP17480 764 aaKnown RBP31.16■■■□□ 2.58
MATR3-206ENST00000503811 BICRAQ9NZM4 1560 aa31.15■■■□□ 2.58
MATR3-206ENST00000503811 EEA1Q15075 1411 aa31.09■■■□□ 2.57
MATR3-206ENST00000503811 GOLGA3Q08378 1498 aa31■■■□□ 2.55
MATR3-206ENST00000503811 PEG3Q9GZU2 1588 aa30.95■■■□□ 2.55
MATR3-206ENST00000503811 SYNJ1O43426 1573 aa30.93■■■□□ 2.54
MATR3-206ENST00000503811 DIEXFQ68CQ4 756 aaKnown RBP30.87■■■□□ 2.53
MATR3-206ENST00000503811 ATAD2BQ9ULI0 1458 aa30.8■■■□□ 2.52
MATR3-206ENST00000503811 NEUROD1Q13562 356 aa30.79■■■□□ 2.52
MATR3-206ENST00000503811 CEP164Q9UPV0 1460 aa30.79■■■□□ 2.52
MATR3-206ENST00000503811 ACIN1Q9UKV3 1341 aaKnown RBP30.76■■■□□ 2.51
MATR3-206ENST00000503811 KIF21BO75037 1637 aa30.72■■■□□ 2.51
MATR3-206ENST00000503811 BAZ1BQ9UIG0 1483 aaKnown RBP30.72■■■□□ 2.51
MATR3-206ENST00000503811 CLIP1P30622 1438 aa30.71■■■□□ 2.51
MATR3-206ENST00000503811 HNRNPUL2Q1KMD3 747 aaKnown RBP30.67■■■□□ 2.5
MATR3-206ENST00000503811 RAPGEF2Q9Y4G8 1499 aa30.65■■■□□ 2.5
MATR3-206ENST00000503811 RANGAP1P46060 587 aaPredicted RBP30.64■■■□□ 2.49
MATR3-206ENST00000503811 VPS8Q8N3P4 1428 aa30.58■■■□□ 2.49
MATR3-206ENST00000503811 ZNF316A6NFI3 1004 aaPredicted RBP30.54■■■□□ 2.48
MATR3-206ENST00000503811 PELP1Q8IZL8 1130 aaKnown RBP30.5■■■□□ 2.47
MATR3-206ENST00000503811 GTF3C3Q9Y5Q9 886 aa30.47■■■□□ 2.47
MATR3-206ENST00000503811 TOP2BQ02880 1626 aa30.44■■■□□ 2.46
MATR3-206ENST00000503811 CENPBP07199 599 aaPredicted RBP30.44■■■□□ 2.46
MATR3-206ENST00000503811 APLP2Q06481 763 aa30.4■■■□□ 2.46
MATR3-206ENST00000503811 BIVM-ERCC5R4GMW8 1640 aa30.29■■■□□ 2.44
MATR3-206ENST00000503811 YTHDC1Q96MU7 727 aaKnown RBP30.27■■■□□ 2.44
MATR3-206ENST00000503811 PRXQ9BXM0 1461 aa30.25■■■□□ 2.43
MATR3-206ENST00000503811 MIER1Q8N108 512 aa30.24■■■□□ 2.43
MATR3-206ENST00000503811 ARAP1Q96P48 1450 aa30.21■■■□□ 2.43
MATR3-206ENST00000503811 ERICH3Q5RHP9 1530 aa30.18■■■□□ 2.42
MATR3-206ENST00000503811 KANK4Q5T7N3 995 aaPredicted RBP30.18■■■□□ 2.42
MATR3-206ENST00000503811 CUX1P39880 1505 aa30.17■■■□□ 2.42
MATR3-206ENST00000503811 NCAPD3P42695 1498 aa30.1■■■□□ 2.41
MATR3-206ENST00000503811 HMGXB3Q12766 1538 aa30.08■■■□□ 2.41
MATR3-206ENST00000503811 DHX57Q6P158 1386 aaKnown RBP30.04■■■□□ 2.4
MATR3-206ENST00000503811 KIF27Q86VH2 1401 aa30.02■■■□□ 2.4
MATR3-206ENST00000503811 CFTRP13569 1480 aa29.96■■■□□ 2.39
MATR3-206ENST00000503811 ARHGAP35Q9NRY4 1499 aa29.91■■■□□ 2.38
MATR3-206ENST00000503811 RRBP1Q9P2E9 1410 aaKnown RBP29.89■■■□□ 2.38
MATR3-206ENST00000503811 CLSPNQ9HAW4 1339 aa29.87■■■□□ 2.37
MATR3-206ENST00000503811 ITGAEP38570 1179 aa29.8■■■□□ 2.36
MATR3-206ENST00000503811 CCNB3Q8WWL7 1395 aa29.78■■■□□ 2.36
MATR3-206ENST00000503811 CUX2O14529 1486 aa29.76■■■□□ 2.35
MATR3-206ENST00000503811 IGF1RP08069 1367 aa29.74■■■□□ 2.35
MATR3-206ENST00000503811 CARMIL1Q5VZK9 1371 aa29.6■■■□□ 2.33
MATR3-206ENST00000503811 FGD5Q6ZNL6 1462 aa29.59■■■□□ 2.33
MATR3-206ENST00000503811 PRDM2Q13029 1718 aa29.59■■■□□ 2.33
MATR3-206ENST00000503811 RAB3GAP2Q9H2M9 1393 aa29.59■■■□□ 2.33
MATR3-206ENST00000503811 CADPSQ9ULU8 1353 aa29.59■■■□□ 2.33
MATR3-206ENST00000503811 TIAM1Q13009 1591 aa29.57■■■□□ 2.32
MATR3-206ENST00000503811 MAPKBP1O60336 1514 aa29.52■■■□□ 2.32
MATR3-206ENST00000503811 PHLDB1Q86UU1 1377 aa29.5■■■□□ 2.31
MATR3-206ENST00000503811 P3H3Q8IVL6 736 aa29.49■■■□□ 2.31
MATR3-206ENST00000503811 LRRC9Q6ZRR7 1453 aa29.48■■■□□ 2.31
MATR3-206ENST00000503811 MAP3K1Q13233 1512 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms