RNA–Protein interactions for RNA: ENST00000303434.8

TRABD-201, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRABD, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-201ENST00000303434 NISCHQ9Y2I1 1504 aa38.22■■■■□ 3.71
TRABD-201ENST00000303434 CCDC180Q9P1Z9 1646 aa32.62■■■□□ 2.81
TRABD-201ENST00000303434 SHROOM4Q9ULL8 1493 aa32.34■■■□□ 2.77
TRABD-201ENST00000303434 ZCCHC6Q5VYS8 1495 aaKnown RBP32.3■■■□□ 2.76
TRABD-201ENST00000303434 SUPT5HO00267 1087 aaKnown RBP31.69■■■□□ 2.66
TRABD-201ENST00000303434 DCAF8L2P0C7V8 631 aa31.61■■■□□ 2.65
TRABD-201ENST00000303434 PELP1Q8IZL8 1130 aaKnown RBP31.46■■■□□ 2.63
TRABD-201ENST00000303434 DCAF1Q9Y4B6 1507 aa31.43■■■□□ 2.62
TRABD-201ENST00000303434 HRCP23327 699 aa31.32■■■□□ 2.6
TRABD-201ENST00000303434 CHIC1Q5VXU3 224 aa30.81■■■□□ 2.52
TRABD-201ENST00000303434 ABCC9O60706 1549 aa30.74■■■□□ 2.51
TRABD-201ENST00000303434 MYO15BQ96JP2 1530 aa30.59■■■□□ 2.49
TRABD-201ENST00000303434 MYT1Q01538 1121 aa30.54■■■□□ 2.48
TRABD-201ENST00000303434 SCRIBQ14160 1630 aa30.44■■■□□ 2.46
TRABD-201ENST00000303434 PPARGC1BQ86YN6 1023 aaKnown RBP30.36■■■□□ 2.45
TRABD-201ENST00000303434 NACADO15069 1562 aa30.18■■■□□ 2.42
TRABD-201ENST00000303434 RSF1Q96T23 1441 aaPredicted RBP30.18■■■□□ 2.42
TRABD-201ENST00000303434 PCGF6Q9BYE7 350 aa30.16■■■□□ 2.42
TRABD-201ENST00000303434 SCAF1Q9H7N4 1312 aaKnown RBP29.9■■■□□ 2.38
TRABD-201ENST00000303434 RB1CC1Q8TDY2 1594 aa29.86■■■□□ 2.37
TRABD-201ENST00000303434 LOC105371045A0A1W2PR82 267 aa29.84■■■□□ 2.37
TRABD-201ENST00000303434 CECR2Q9BXF3 1484 aa29.77■■■□□ 2.36
TRABD-201ENST00000303434 MROH2BQ7Z745 1585 aa29.68■■■□□ 2.34
TRABD-201ENST00000303434 TRIM41Q8WV44 630 aa29.59■■■□□ 2.33
TRABD-201ENST00000303434 WIZO95785 1651 aa29.52■■■□□ 2.32
TRABD-201ENST00000303434 BAZ1AQ9NRL2 1556 aaPredicted RBP29.38■■■□□ 2.29
TRABD-201ENST00000303434 ZEB1P37275 1124 aaPredicted RBP29.34■■■□□ 2.29
TRABD-201ENST00000303434 UNC13AQ9UPW8 1703 aa29.33■■■□□ 2.29
TRABD-201ENST00000303434 FAM9AQ8IZU1 332 aaPredicted RBP29.26■■■□□ 2.27
TRABD-201ENST00000303434 TRIM26Q12899 539 aaPredicted RBP29.21■■■□□ 2.27
TRABD-201ENST00000303434 SMARCA4P51532 1647 aa29.14■■■□□ 2.26
TRABD-201ENST00000303434 TOP2AP11388 1531 aaKnown RBP29.08■■■□□ 2.25
TRABD-201ENST00000303434 EIF4G1Q04637 1599 aaKnown RBP29.07■■■□□ 2.24
TRABD-201ENST00000303434 ACIN1Q9UKV3 1341 aaKnown RBP29.05■■■□□ 2.24
TRABD-201ENST00000303434 BICRAQ9NZM4 1560 aa29■■■□□ 2.23
TRABD-201ENST00000303434 EHMT2Q96KQ7 1210 aa28.94■■■□□ 2.22
TRABD-201ENST00000303434 CCDC88BA6NC98 1476 aa28.94■■■□□ 2.22
TRABD-201ENST00000303434 PABPN1Q86U42 306 aaKnown RBP eCLIP28.92■■■□□ 2.22
TRABD-201ENST00000303434 SMARCA2P51531 1590 aa28.91■■■□□ 2.22
TRABD-201ENST00000303434 TTBK1Q5TCY1 1321 aaPredicted RBP28.91■■■□□ 2.22
TRABD-201ENST00000303434 NEUROD1Q13562 356 aa28.83■■■□□ 2.21
TRABD-201ENST00000303434 ABCC8Q09428 1581 aa28.77■■■□□ 2.2
TRABD-201ENST00000303434 GTF3C3Q9Y5Q9 886 aa28.76■■■□□ 2.19
TRABD-201ENST00000303434 CENPBP07199 599 aaPredicted RBP28.64■■■□□ 2.18
TRABD-201ENST00000303434 PEG3Q9GZU2 1588 aa28.63■■■□□ 2.17
TRABD-201ENST00000303434 SOGA1O94964 1423 aa28.48■■■□□ 2.15
TRABD-201ENST00000303434 ATAD2BQ9ULI0 1458 aa28.41■■■□□ 2.14
TRABD-201ENST00000303434 EEA1Q15075 1411 aa28.4■■■□□ 2.14
TRABD-201ENST00000303434 CSRNP3Q8WYN3 585 aa28.36■■■□□ 2.13
TRABD-201ENST00000303434 RUSC2Q8N2Y8 1516 aa28.35■■■□□ 2.13
TRABD-201ENST00000303434 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
TRABD-201ENST00000303434 BAZ1BQ9UIG0 1483 aaKnown RBP28.32■■■□□ 2.12
TRABD-201ENST00000303434 TNIKQ9UKE5 1360 aa28.31■■■□□ 2.12
TRABD-201ENST00000303434 CEP162Q5TB80 1403 aa28.3■■■□□ 2.12
TRABD-201ENST00000303434 SYNJ1O43426 1573 aa28.2■■■□□ 2.11
TRABD-201ENST00000303434 UBTFP17480 764 aaKnown RBP28.19■■■□□ 2.1
TRABD-201ENST00000303434 GOLGA3Q08378 1498 aa28.16■■■□□ 2.1
TRABD-201ENST00000303434 DIEXFQ68CQ4 756 aaKnown RBP28.15■■■□□ 2.1
TRABD-201ENST00000303434 BCL11AQ9H165 835 aa28.14■■■□□ 2.1
TRABD-201ENST00000303434 CEP164Q9UPV0 1460 aa28.02■■■□□ 2.08
TRABD-201ENST00000303434 KIF21BO75037 1637 aa28.01■■■□□ 2.07
TRABD-201ENST00000303434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28■■■□□ 2.07
TRABD-201ENST00000303434 CCER1Q8TC90 406 aaPredicted RBP27.93■■■□□ 2.06
TRABD-201ENST00000303434 NCAPD3P42695 1498 aa27.92■■■□□ 2.06
TRABD-201ENST00000303434 TOP2BQ02880 1626 aa27.91■■■□□ 2.06
TRABD-201ENST00000303434 HMGXB3Q12766 1538 aa27.9■■■□□ 2.06
TRABD-201ENST00000303434 CC2D2AQ9P2K1 1620 aa27.83■■■□□ 2.04
TRABD-201ENST00000303434 BIVM-ERCC5R4GMW8 1640 aa27.83■■■□□ 2.04
TRABD-201ENST00000303434 CLIP1P30622 1438 aa27.82■■■□□ 2.04
TRABD-201ENST00000303434 ANP32EQ9BTT0 268 aa27.81■■■□□ 2.04
TRABD-201ENST00000303434 RAPGEF2Q9Y4G8 1499 aa27.81■■■□□ 2.04
TRABD-201ENST00000303434 VPS8Q8N3P4 1428 aa27.69■■■□□ 2.02
TRABD-201ENST00000303434 CFTRP13569 1480 aa27.65■■■□□ 2.02
TRABD-201ENST00000303434 CUX1P39880 1505 aa27.64■■■□□ 2.02
TRABD-201ENST00000303434 PRXQ9BXM0 1461 aa27.59■■■□□ 2.01
TRABD-201ENST00000303434 ERICH3Q5RHP9 1530 aa27.59■■■□□ 2.01
TRABD-201ENST00000303434 RANGAP1P46060 587 aaPredicted RBP27.57■■■□□ 2
TRABD-201ENST00000303434 YTHDC1Q96MU7 727 aaKnown RBP27.56■■■□□ 2
TRABD-201ENST00000303434 APLP2Q06481 763 aa27.55■■■□□ 2
TRABD-201ENST00000303434 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
TRABD-201ENST00000303434 ZNF316A6NFI3 1004 aaPredicted RBP27.5■■□□□ 1.99
TRABD-201ENST00000303434 PRKCSHP14314 528 aaPredicted RBP27.5■■□□□ 1.99
TRABD-201ENST00000303434 CLSPNQ9HAW4 1339 aa27.49■■□□□ 1.99
TRABD-201ENST00000303434 PRDM2Q13029 1718 aa27.46■■□□□ 1.99
TRABD-201ENST00000303434 DNAJC5BQ9UF47 199 aa27.45■■□□□ 1.99
TRABD-201ENST00000303434 HNRNPUL2Q1KMD3 747 aaKnown RBP27.45■■□□□ 1.98
TRABD-201ENST00000303434 ARAP1Q96P48 1450 aa27.38■■□□□ 1.97
TRABD-201ENST00000303434 CADPSQ9ULU8 1353 aa27.36■■□□□ 1.97
TRABD-201ENST00000303434 TSHZ2Q9NRE2 1034 aa27.34■■□□□ 1.97
TRABD-201ENST00000303434 MIER1Q8N108 512 aa27.3■■□□□ 1.96
TRABD-201ENST00000303434 SUPT16HQ9Y5B9 1047 aaKnown RBP27.27■■□□□ 1.96
TRABD-201ENST00000303434 CUX2O14529 1486 aa27.23■■□□□ 1.95
TRABD-201ENST00000303434 IGF1RP08069 1367 aa27.22■■□□□ 1.95
TRABD-201ENST00000303434 KANK4Q5T7N3 995 aaPredicted RBP27.2■■□□□ 1.94
TRABD-201ENST00000303434 ARHGAP35Q9NRY4 1499 aa27.18■■□□□ 1.94
TRABD-201ENST00000303434 FGD5Q6ZNL6 1462 aa27.17■■□□□ 1.94
TRABD-201ENST00000303434 ERICH6Q7L0X2 663 aa27.14■■□□□ 1.94
TRABD-201ENST00000303434 CARMIL1Q5VZK9 1371 aa27.09■■□□□ 1.93
TRABD-201ENST00000303434 FANCD2Q9BXW9 1451 aa27.07■■□□□ 1.92
TRABD-201ENST00000303434 RRBP1Q9P2E9 1410 aaKnown RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms