RNA–Protein interactions for RNA: ENST00000283629.7

UBP1-202, Transcript of upstream binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBP1, Length 4,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-202ENST00000283629 NISCHQ9Y2I1 1504 aa34.96■■■■□ 3.19
UBP1-202ENST00000283629 DCAF8L2P0C7V8 631 aa32.46■■■□□ 2.79
UBP1-202ENST00000283629 SHROOM4Q9ULL8 1493 aa32.03■■■□□ 2.72
UBP1-202ENST00000283629 SUPT5HO00267 1087 aaKnown RBP31.78■■■□□ 2.68
UBP1-202ENST00000283629 PCGF6Q9BYE7 350 aa30.78■■■□□ 2.52
UBP1-202ENST00000283629 PELP1Q8IZL8 1130 aaKnown RBP30.24■■■□□ 2.43
UBP1-202ENST00000283629 EHMT2Q96KQ7 1210 aa30.16■■■□□ 2.42
UBP1-202ENST00000283629 HRCP23327 699 aa30.12■■■□□ 2.41
UBP1-202ENST00000283629 PPARGC1BQ86YN6 1023 aaKnown RBP30.02■■■□□ 2.4
UBP1-202ENST00000283629 FAM9AQ8IZU1 332 aaPredicted RBP29.73■■■□□ 2.35
UBP1-202ENST00000283629 CHIC1Q5VXU3 224 aa29.57■■■□□ 2.32
UBP1-202ENST00000283629 LOC105371045A0A1W2PR82 267 aa29.37■■■□□ 2.29
UBP1-202ENST00000283629 MYT1Q01538 1121 aa29.37■■■□□ 2.29
UBP1-202ENST00000283629 CENPBP07199 599 aaPredicted RBP29.35■■■□□ 2.29
UBP1-202ENST00000283629 TTBK1Q5TCY1 1321 aaPredicted RBP29.27■■■□□ 2.28
UBP1-202ENST00000283629 ZEB1P37275 1124 aaPredicted RBP29.25■■■□□ 2.27
UBP1-202ENST00000283629 ZCCHC6Q5VYS8 1495 aaKnown RBP29.25■■■□□ 2.27
UBP1-202ENST00000283629 TRIM41Q8WV44 630 aa29.23■■■□□ 2.27
UBP1-202ENST00000283629 YTHDC1Q96MU7 727 aaKnown RBP29.14■■■□□ 2.26
UBP1-202ENST00000283629 CCER1Q8TC90 406 aaPredicted RBP29.06■■■□□ 2.24
UBP1-202ENST00000283629 TRIM26Q12899 539 aaPredicted RBP28.99■■■□□ 2.23
UBP1-202ENST00000283629 ABCC9O60706 1549 aa28.97■■■□□ 2.23
UBP1-202ENST00000283629 CCDC180Q9P1Z9 1646 aa28.81■■■□□ 2.2
UBP1-202ENST00000283629 GTF3C3Q9Y5Q9 886 aa28.6■■■□□ 2.17
UBP1-202ENST00000283629 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
UBP1-202ENST00000283629 RANGAP1P46060 587 aaPredicted RBP28.58■■■□□ 2.17
UBP1-202ENST00000283629 SCRIBQ14160 1630 aa28.46■■■□□ 2.15
UBP1-202ENST00000283629 SCAF1Q9H7N4 1312 aaKnown RBP28.44■■■□□ 2.14
UBP1-202ENST00000283629 PABPN1Q86U42 306 aaKnown RBP eCLIP28.41■■■□□ 2.14
UBP1-202ENST00000283629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.36■■■□□ 2.13
UBP1-202ENST00000283629 UBTFP17480 764 aaKnown RBP28.33■■■□□ 2.13
UBP1-202ENST00000283629 DIEXFQ68CQ4 756 aaKnown RBP28.32■■■□□ 2.12
UBP1-202ENST00000283629 ERICH6Q7L0X2 663 aa28.3■■■□□ 2.12
UBP1-202ENST00000283629 ACIN1Q9UKV3 1341 aaKnown RBP28.24■■■□□ 2.11
UBP1-202ENST00000283629 APLP2Q06481 763 aa28.13■■■□□ 2.09
UBP1-202ENST00000283629 NEUROD1Q13562 356 aa28.05■■■□□ 2.08
UBP1-202ENST00000283629 RSF1Q96T23 1441 aaPredicted RBP28■■■□□ 2.07
UBP1-202ENST00000283629 NEFLP07196 543 aa27.87■■■□□ 2.05
UBP1-202ENST00000283629 DCAF1Q9Y4B6 1507 aa27.81■■■□□ 2.04
UBP1-202ENST00000283629 CECR2Q9BXF3 1484 aa27.75■■■□□ 2.03
UBP1-202ENST00000283629 HNRNPUL2Q1KMD3 747 aaKnown RBP27.72■■■□□ 2.03
UBP1-202ENST00000283629 BCANQ96GW7 911 aa27.69■■■□□ 2.02
UBP1-202ENST00000283629 ATP1B4Q9UN42 357 aaPredicted RBP27.6■■■□□ 2.01
UBP1-202ENST00000283629 RB1CC1Q8TDY2 1594 aa27.48■■□□□ 1.99
UBP1-202ENST00000283629 ZNF316A6NFI3 1004 aaPredicted RBP27.42■■□□□ 1.98
UBP1-202ENST00000283629 ITGAEP38570 1179 aa27.41■■□□□ 1.98
UBP1-202ENST00000283629 CSRNP3Q8WYN3 585 aa27.41■■□□□ 1.98
UBP1-202ENST00000283629 MROH2BQ7Z745 1585 aa27.38■■□□□ 1.97
UBP1-202ENST00000283629 NACADO15069 1562 aa27.37■■□□□ 1.97
UBP1-202ENST00000283629 WIZO95785 1651 aa27.1■■□□□ 1.93
UBP1-202ENST00000283629 MIER1Q8N108 512 aa27.08■■□□□ 1.93
UBP1-202ENST00000283629 BAZ1AQ9NRL2 1556 aaPredicted RBP26.97■■□□□ 1.91
UBP1-202ENST00000283629 ABCC8Q09428 1581 aa26.97■■□□□ 1.91
UBP1-202ENST00000283629 SOGA1O94964 1423 aa26.96■■□□□ 1.91
UBP1-202ENST00000283629 CNGB1Q14028 1251 aaPredicted RBP26.96■■□□□ 1.91
UBP1-202ENST00000283629 BCL11AQ9H165 835 aa26.9■■□□□ 1.9
UBP1-202ENST00000283629 FKBP8Q14318 412 aa26.89■■□□□ 1.9
UBP1-202ENST00000283629 CCDC88BA6NC98 1476 aa26.88■■□□□ 1.89
UBP1-202ENST00000283629 P3H3Q8IVL6 736 aa26.88■■□□□ 1.89
UBP1-202ENST00000283629 RTL5Q5HYW3 569 aaPredicted RBP26.88■■□□□ 1.89
UBP1-202ENST00000283629 CEP162Q5TB80 1403 aa26.85■■□□□ 1.89
UBP1-202ENST00000283629 ANP32EQ9BTT0 268 aa26.85■■□□□ 1.89
UBP1-202ENST00000283629 WRNQ14191 1432 aaPredicted RBP eCLIP26.77■■□□□ 1.88
UBP1-202ENST00000283629 CDK11AQ9UQ88 783 aaPredicted RBP26.74■■□□□ 1.87
UBP1-202ENST00000283629 FAM50AQ14320 339 aaKnown RBP26.72■■□□□ 1.87
UBP1-202ENST00000283629 BAZ1BQ9UIG0 1483 aaKnown RBP26.64■■□□□ 1.85
UBP1-202ENST00000283629 CLIP1P30622 1438 aa26.62■■□□□ 1.85
UBP1-202ENST00000283629 POLR3GLQ9BT43 218 aa26.62■■□□□ 1.85
UBP1-202ENST00000283629 RUSC2Q8N2Y8 1516 aa26.62■■□□□ 1.85
UBP1-202ENST00000283629 TNIKQ9UKE5 1360 aa26.59■■□□□ 1.85
UBP1-202ENST00000283629 DAXXQ9UER7 740 aaPredicted RBP26.55■■□□□ 1.84
UBP1-202ENST00000283629 GOLGA3Q08378 1498 aa26.54■■□□□ 1.84
UBP1-202ENST00000283629 TRIM52Q96A61 297 aa26.52■■□□□ 1.84
UBP1-202ENST00000283629 NBR1Q14596 966 aa26.52■■□□□ 1.84
UBP1-202ENST00000283629 TOP2AP11388 1531 aaKnown RBP26.51■■□□□ 1.83
UBP1-202ENST00000283629 ARID3CA6NKF2 412 aa26.5■■□□□ 1.83
UBP1-202ENST00000283629 SUPT16HQ9Y5B9 1047 aaKnown RBP26.5■■□□□ 1.83
UBP1-202ENST00000283629 CLSPNQ9HAW4 1339 aa26.49■■□□□ 1.83
UBP1-202ENST00000283629 EIF5BO60841 1220 aaKnown RBP26.48■■□□□ 1.83
UBP1-202ENST00000283629 ANP32CO43423 234 aa26.47■■□□□ 1.83
UBP1-202ENST00000283629 SMARCA4P51532 1647 aa26.46■■□□□ 1.83
UBP1-202ENST00000283629 EEA1Q15075 1411 aa26.43■■□□□ 1.82
UBP1-202ENST00000283629 DDX10Q13206 875 aaKnown RBP26.41■■□□□ 1.82
UBP1-202ENST00000283629 IRX6P78412 446 aaPredicted RBP26.41■■□□□ 1.82
UBP1-202ENST00000283629 CEP164Q9UPV0 1460 aa26.32■■□□□ 1.8
UBP1-202ENST00000283629 SMARCA2P51531 1590 aa26.3■■□□□ 1.8
UBP1-202ENST00000283629 NPM2Q86SE8 214 aaKnown RBP26.26■■□□□ 1.79
UBP1-202ENST00000283629 TSHZ2Q9NRE2 1034 aa26.24■■□□□ 1.79
UBP1-202ENST00000283629 ATAD2BQ9ULI0 1458 aa26.24■■□□□ 1.79
UBP1-202ENST00000283629 KANK4Q5T7N3 995 aaPredicted RBP26.21■■□□□ 1.79
UBP1-202ENST00000283629 HNRNPUQ00839 825 aaKnown RBP eCLIP26.21■■□□□ 1.79
UBP1-202ENST00000283629 HIRIP3Q9BW71 556 aaPredicted RBP26.21■■□□□ 1.79
UBP1-202ENST00000283629 ANP32AP39687 249 aaKnown RBP26.17■■□□□ 1.78
UBP1-202ENST00000283629 RAPGEF2Q9Y4G8 1499 aa26.14■■□□□ 1.78
UBP1-202ENST00000283629 FBLN2P98095 1184 aa26.13■■□□□ 1.77
UBP1-202ENST00000283629 RTN4Q9NQC3 1192 aaKnown RBP26.12■■□□□ 1.77
UBP1-202ENST00000283629 KIF27Q86VH2 1401 aa26.11■■□□□ 1.77
UBP1-202ENST00000283629 RBM19Q9Y4C8 960 aaKnown RBP26.09■■□□□ 1.77
UBP1-202ENST00000283629 VPS8Q8N3P4 1428 aa26.04■■□□□ 1.76
UBP1-202ENST00000283629 CHIC2Q9UKJ5 165 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms