RNA–Protein interactions for RNA: ENST00000503585.5

PACRGL-208, Transcript of parkin coregulated like, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACRGL, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-208ENST00000503585 NISCHQ9Y2I1 1504 aa51.72■■■■■ 5.87
PACRGL-208ENST00000503585 CCDC180Q9P1Z9 1646 aa46.11■■■■■ 4.97
PACRGL-208ENST00000503585 ABCC9O60706 1549 aa45.21■■■■■ 4.83
PACRGL-208ENST00000503585 RB1CC1Q8TDY2 1594 aa43.42■■■■■ 4.54
PACRGL-208ENST00000503585 NACADO15069 1562 aa43.31■■■■■ 4.52
PACRGL-208ENST00000503585 DCAF8L2P0C7V8 631 aa43.17■■■■■ 4.5
PACRGL-208ENST00000503585 ZCCHC6Q5VYS8 1495 aaKnown RBP43.08■■■■■ 4.49
PACRGL-208ENST00000503585 MYO15BQ96JP2 1530 aa42.98■■■■■ 4.47
PACRGL-208ENST00000503585 DCAF1Q9Y4B6 1507 aa42.77■■■■■ 4.44
PACRGL-208ENST00000503585 UNC13AQ9UPW8 1703 aa42.58■■■■■ 4.41
PACRGL-208ENST00000503585 BICRAQ9NZM4 1560 aa42.16■■■■■ 4.34
PACRGL-208ENST00000503585 PABPN1Q86U42 306 aaKnown RBP eCLIP42.16■■■■■ 4.34
PACRGL-208ENST00000503585 SCRIBQ14160 1630 aa42.08■■■■■ 4.33
PACRGL-208ENST00000503585 SHROOM4Q9ULL8 1493 aa41.62■■■■■ 4.25
PACRGL-208ENST00000503585 DNAJC5BQ9UF47 199 aa41.58■■■■■ 4.25
PACRGL-208ENST00000503585 EIF4G1Q04637 1599 aaKnown RBP41.04■■■■■ 4.16
PACRGL-208ENST00000503585 CC2D2AQ9P2K1 1620 aa40.92■■■■■ 4.14
PACRGL-208ENST00000503585 CECR2Q9BXF3 1484 aa40.61■■■■■ 4.09
PACRGL-208ENST00000503585 SMARCA4P51532 1647 aa40.22■■■■■ 4.03
PACRGL-208ENST00000503585 BAZ1AQ9NRL2 1556 aaPredicted RBP40.11■■■■■ 4.01
PACRGL-208ENST00000503585 ATAD2BQ9ULI0 1458 aa39.97■■■■□ 3.99
PACRGL-208ENST00000503585 NCAPD3P42695 1498 aa39.94■■■■□ 3.98
PACRGL-208ENST00000503585 SMARCA2P51531 1590 aa39.92■■■■□ 3.98
PACRGL-208ENST00000503585 MROH2BQ7Z745 1585 aa39.89■■■■□ 3.98
PACRGL-208ENST00000503585 PEG3Q9GZU2 1588 aa39.8■■■■□ 3.96
PACRGL-208ENST00000503585 HMGXB3Q12766 1538 aa39.8■■■■□ 3.96
PACRGL-208ENST00000503585 BAZ1BQ9UIG0 1483 aaKnown RBP39.64■■■■□ 3.94
PACRGL-208ENST00000503585 WIZO95785 1651 aa39.5■■■■□ 3.91
PACRGL-208ENST00000503585 RSF1Q96T23 1441 aaPredicted RBP39.33■■■■□ 3.89
PACRGL-208ENST00000503585 NESP48681 1621 aa39.11■■■■□ 3.85
PACRGL-208ENST00000503585 TOP2AP11388 1531 aaKnown RBP39.03■■■■□ 3.84
PACRGL-208ENST00000503585 LAMC3Q9Y6N6 1575 aa38.97■■■■□ 3.83
PACRGL-208ENST00000503585 ERCC6Q03468 1493 aa38.94■■■■□ 3.82
PACRGL-208ENST00000503585 CADPSQ9ULU8 1353 aa38.76■■■■□ 3.79
PACRGL-208ENST00000503585 KIF21AQ7Z4S6 1674 aa38.72■■■■□ 3.79
PACRGL-208ENST00000503585 PDS5BQ9NTI5 1447 aa38.63■■■■□ 3.78
PACRGL-208ENST00000503585 THOC2Q8NI27 1593 aaKnown RBP38.59■■■■□ 3.77
PACRGL-208ENST00000503585 CUX2O14529 1486 aa38.58■■■■□ 3.77
PACRGL-208ENST00000503585 CCDC88BA6NC98 1476 aa38.53■■■■□ 3.76
PACRGL-208ENST00000503585 CFTRP13569 1480 aa38.53■■■■□ 3.76
PACRGL-208ENST00000503585 PRDM2Q13029 1718 aa38.38■■■■□ 3.73
PACRGL-208ENST00000503585 FANCD2Q9BXW9 1451 aa38.36■■■■□ 3.73
PACRGL-208ENST00000503585 CEP164Q9UPV0 1460 aa38.33■■■■□ 3.73
PACRGL-208ENST00000503585 MRC2Q9UBG0 1479 aa38.3■■■■□ 3.72
PACRGL-208ENST00000503585 WDR62O43379 1518 aa38.21■■■■□ 3.71
PACRGL-208ENST00000503585 SUPT5HO00267 1087 aaKnown RBP38.19■■■■□ 3.7
PACRGL-208ENST00000503585 URB2Q14146 1524 aaKnown RBP38.02■■■■□ 3.68
PACRGL-208ENST00000503585 TOPBP1Q92547 1522 aa37.75■■■■□ 3.63
PACRGL-208ENST00000503585 DNMBPQ6XZF7 1577 aa37.71■■■■□ 3.63
PACRGL-208ENST00000503585 ABCC8Q09428 1581 aa37.66■■■■□ 3.62
PACRGL-208ENST00000503585 IFT140Q96RY7 1462 aa37.5■■■■□ 3.59
PACRGL-208ENST00000503585 DNAJC5Q9H3Z4 198 aa37.5■■■■□ 3.59
PACRGL-208ENST00000503585 CUX1P39880 1505 aa37.43■■■■□ 3.58
PACRGL-208ENST00000503585 POLA1P09884 1462 aaPredicted RBP37.42■■■■□ 3.58
PACRGL-208ENST00000503585 ZNF608Q9ULD9 1512 aaPredicted RBP37.4■■■■□ 3.58
PACRGL-208ENST00000503585 TARBP1Q13395 1621 aaKnown RBP37.39■■■■□ 3.58
PACRGL-208ENST00000503585 FGD5Q6ZNL6 1462 aa37.32■■■■□ 3.56
PACRGL-208ENST00000503585 EIF4G3O43432 1585 aaKnown RBP37.3■■■■□ 3.56
PACRGL-208ENST00000503585 RAD54L2Q9Y4B4 1467 aa37.26■■■■□ 3.55
PACRGL-208ENST00000503585 SOGA1O94964 1423 aa37.2■■■■□ 3.55
PACRGL-208ENST00000503585 AQRO60306 1485 aaKnown RBP eCLIP37.14■■■■□ 3.54
PACRGL-208ENST00000503585 WDR97A6NE52 1622 aa37.11■■■■□ 3.53
PACRGL-208ENST00000503585 BIVM-ERCC5R4GMW8 1640 aa37.11■■■■□ 3.53
PACRGL-208ENST00000503585 SYNJ1O43426 1573 aa37.1■■■■□ 3.53
PACRGL-208ENST00000503585 WRNQ14191 1432 aaPredicted RBP eCLIP37.08■■■■□ 3.53
PACRGL-208ENST00000503585 TOP2BQ02880 1626 aa37.08■■■■□ 3.53
PACRGL-208ENST00000503585 TDRD9Q8NDG6 1382 aaKnown RBP37.03■■■■□ 3.52
PACRGL-208ENST00000503585 ABCA10Q8WWZ4 1543 aa36.93■■■■□ 3.5
PACRGL-208ENST00000503585 CHD1O14646 1710 aa36.89■■■■□ 3.5
PACRGL-208ENST00000503585 OSCARQ8IYS5 282 aa36.87■■■■□ 3.49
PACRGL-208ENST00000503585 ABCA5Q8WWZ7 1642 aa36.86■■■■□ 3.49
PACRGL-208ENST00000503585 PBRM1Q86U86 1689 aa36.86■■■■□ 3.49
PACRGL-208ENST00000503585 SNAPC4Q5SXM2 1469 aa36.82■■■■□ 3.49
PACRGL-208ENST00000503585 GRIN2BQ13224 1484 aa36.81■■■■□ 3.48
PACRGL-208ENST00000503585 GAPVD1Q14C86 1478 aa36.8■■■■□ 3.48
PACRGL-208ENST00000503585 MAGI1Q96QZ7 1491 aaPredicted RBP36.74■■■■□ 3.47
PACRGL-208ENST00000503585 FBLN2P98095 1184 aa36.66■■■■□ 3.46
PACRGL-208ENST00000503585 SYNJ2O15056 1496 aa36.6■■■■□ 3.45
PACRGL-208ENST00000503585 ADAMTS12P58397 1594 aa36.52■■■■□ 3.44
PACRGL-208ENST00000503585 CHMP7Q8WUX9 453 aaPredicted RBP36.52■■■■□ 3.44
PACRGL-208ENST00000503585 ERICH3Q5RHP9 1530 aa36.49■■■■□ 3.43
PACRGL-208ENST00000503585 RIMBP3CA6NJZ7 1639 aa36.46■■■■□ 3.43
PACRGL-208ENST00000503585 RIMBP3BA6NNM3 1639 aa36.46■■■■□ 3.43
PACRGL-208ENST00000503585 RIMBP3Q9UFD9 1639 aa36.46■■■■□ 3.43
PACRGL-208ENST00000503585 CLASP1Q7Z460 1538 aa36.43■■■■□ 3.42
PACRGL-208ENST00000503585 ARHGEF11O15085 1522 aa36.41■■■■□ 3.42
PACRGL-208ENST00000503585 GRIN2AQ12879 1464 aa36.37■■■■□ 3.41
PACRGL-208ENST00000503585 FHAD1B1AJZ9 1412 aa36.35■■■■□ 3.41
PACRGL-208ENST00000503585 KIF27Q86VH2 1401 aa36.3■■■■□ 3.4
PACRGL-208ENST00000503585 TRIM41Q8WV44 630 aa36.25■■■■□ 3.39
PACRGL-208ENST00000503585 CEP170Q5SW79 1584 aa36.24■■■■□ 3.39
PACRGL-208ENST00000503585 NUP160Q12769 1436 aa36.19■■■■□ 3.38
PACRGL-208ENST00000503585 CUL7Q14999 1698 aa36.17■■■■□ 3.38
PACRGL-208ENST00000503585 IGF1RP08069 1367 aa36.16■■■■□ 3.38
PACRGL-208ENST00000503585 ARAP1Q96P48 1450 aa36.11■■■■□ 3.37
PACRGL-208ENST00000503585 SHROOM2Q13796 1616 aa36■■■■□ 3.35
PACRGL-208ENST00000503585 RUSC2Q8N2Y8 1516 aa36■■■■□ 3.35
PACRGL-208ENST00000503585 CYB5RLQ6IPT4 315 aa35.98■■■■□ 3.35
PACRGL-208ENST00000503585 ERCC6L2Q5T890 1561 aa35.94■■■■□ 3.34
PACRGL-208ENST00000503585 CARMIL1Q5VZK9 1371 aa35.94■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms