RNA–Protein interactions for RNA: ENST00000592918.5

AP000547.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP000547.3, Length 1,576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-201ENST00000592918 NISCHQ9Y2I1 1504 aa50.31■■■■■ 5.64
AP000547.3-201ENST00000592918 CCDC180Q9P1Z9 1646 aa44.53■■■■■ 4.72
AP000547.3-201ENST00000592918 ABCC9O60706 1549 aa43.26■■■■■ 4.51
AP000547.3-201ENST00000592918 ZCCHC6Q5VYS8 1495 aaKnown RBP41.99■■■■■ 4.31
AP000547.3-201ENST00000592918 DCAF8L2P0C7V8 631 aa41.95■■■■■ 4.31
AP000547.3-201ENST00000592918 NACADO15069 1562 aa41.78■■■■■ 4.28
AP000547.3-201ENST00000592918 RB1CC1Q8TDY2 1594 aa41.75■■■■■ 4.27
AP000547.3-201ENST00000592918 MYO15BQ96JP2 1530 aa41.62■■■■■ 4.25
AP000547.3-201ENST00000592918 DCAF1Q9Y4B6 1507 aa41.6■■■■■ 4.25
AP000547.3-201ENST00000592918 UNC13AQ9UPW8 1703 aa40.81■■■■■ 4.12
AP000547.3-201ENST00000592918 SCRIBQ14160 1630 aa40.74■■■■■ 4.11
AP000547.3-201ENST00000592918 PABPN1Q86U42 306 aaKnown RBP eCLIP40.49■■■■■ 4.07
AP000547.3-201ENST00000592918 BICRAQ9NZM4 1560 aa40.45■■■■■ 4.07
AP000547.3-201ENST00000592918 SHROOM4Q9ULL8 1493 aa40.07■■■■■ 4
AP000547.3-201ENST00000592918 EIF4G1Q04637 1599 aaKnown RBP39.37■■■■□ 3.89
AP000547.3-201ENST00000592918 DNAJC5BQ9UF47 199 aa39.3■■■■□ 3.88
AP000547.3-201ENST00000592918 CECR2Q9BXF3 1484 aa39.17■■■■□ 3.86
AP000547.3-201ENST00000592918 CC2D2AQ9P2K1 1620 aa39.12■■■■□ 3.85
AP000547.3-201ENST00000592918 BAZ1AQ9NRL2 1556 aaPredicted RBP38.97■■■■□ 3.83
AP000547.3-201ENST00000592918 SMARCA4P51532 1647 aa38.96■■■■□ 3.83
AP000547.3-201ENST00000592918 MROH2BQ7Z745 1585 aa38.8■■■■□ 3.8
AP000547.3-201ENST00000592918 ATAD2BQ9ULI0 1458 aa38.64■■■■□ 3.78
AP000547.3-201ENST00000592918 SMARCA2P51531 1590 aa38.61■■■■□ 3.77
AP000547.3-201ENST00000592918 PEG3Q9GZU2 1588 aa38.54■■■■□ 3.76
AP000547.3-201ENST00000592918 NCAPD3P42695 1498 aa38.53■■■■□ 3.76
AP000547.3-201ENST00000592918 RSF1Q96T23 1441 aaPredicted RBP38.49■■■■□ 3.75
AP000547.3-201ENST00000592918 WIZO95785 1651 aa38.41■■■■□ 3.74
AP000547.3-201ENST00000592918 HMGXB3Q12766 1538 aa38.4■■■■□ 3.74
AP000547.3-201ENST00000592918 BAZ1BQ9UIG0 1483 aaKnown RBP38.37■■■■□ 3.73
AP000547.3-201ENST00000592918 TOP2AP11388 1531 aaKnown RBP38.02■■■■□ 3.68
AP000547.3-201ENST00000592918 SUPT5HO00267 1087 aaKnown RBP37.89■■■■□ 3.66
AP000547.3-201ENST00000592918 CCDC88BA6NC98 1476 aa37.57■■■■□ 3.6
AP000547.3-201ENST00000592918 NESP48681 1621 aa37.54■■■■□ 3.6
AP000547.3-201ENST00000592918 LAMC3Q9Y6N6 1575 aa37.48■■■■□ 3.59
AP000547.3-201ENST00000592918 CADPSQ9ULU8 1353 aa37.45■■■■□ 3.59
AP000547.3-201ENST00000592918 CFTRP13569 1480 aa37.31■■■■□ 3.56
AP000547.3-201ENST00000592918 ERCC6Q03468 1493 aa37.26■■■■□ 3.56
AP000547.3-201ENST00000592918 PDS5BQ9NTI5 1447 aa37.22■■■■□ 3.55
AP000547.3-201ENST00000592918 KIF21AQ7Z4S6 1674 aa37.11■■■■□ 3.53
AP000547.3-201ENST00000592918 PRDM2Q13029 1718 aa37.07■■■■□ 3.53
AP000547.3-201ENST00000592918 FANCD2Q9BXW9 1451 aa37.05■■■■□ 3.52
AP000547.3-201ENST00000592918 CEP164Q9UPV0 1460 aa36.97■■■■□ 3.51
AP000547.3-201ENST00000592918 THOC2Q8NI27 1593 aaKnown RBP36.86■■■■□ 3.49
AP000547.3-201ENST00000592918 MRC2Q9UBG0 1479 aa36.82■■■■□ 3.49
AP000547.3-201ENST00000592918 WDR62O43379 1518 aa36.67■■■■□ 3.46
AP000547.3-201ENST00000592918 CUX2O14529 1486 aa36.67■■■■□ 3.46
AP000547.3-201ENST00000592918 URB2Q14146 1524 aaKnown RBP36.65■■■■□ 3.46
AP000547.3-201ENST00000592918 TOPBP1Q92547 1522 aa36.5■■■■□ 3.43
AP000547.3-201ENST00000592918 ABCC8Q09428 1581 aa36.49■■■■□ 3.43
AP000547.3-201ENST00000592918 DNMBPQ6XZF7 1577 aa36.48■■■■□ 3.43
AP000547.3-201ENST00000592918 CUX1P39880 1505 aa36.37■■■■□ 3.41
AP000547.3-201ENST00000592918 WRNQ14191 1432 aaPredicted RBP eCLIP36.29■■■■□ 3.46e-7■□□□□ 11.1
AP000547.3-201ENST00000592918 POLA1P09884 1462 aaPredicted RBP36.21■■■■□ 3.39
AP000547.3-201ENST00000592918 FGD5Q6ZNL6 1462 aa36.19■■■■□ 3.38
AP000547.3-201ENST00000592918 SYNJ1O43426 1573 aa36.19■■■■□ 3.38
AP000547.3-201ENST00000592918 IFT140Q96RY7 1462 aa36.16■■■■□ 3.38
AP000547.3-201ENST00000592918 TOP2BQ02880 1626 aa36.16■■■■□ 3.38
AP000547.3-201ENST00000592918 BIVM-ERCC5R4GMW8 1640 aa36.15■■■■□ 3.38
AP000547.3-201ENST00000592918 SOGA1O94964 1423 aa36.08■■■■□ 3.37
AP000547.3-201ENST00000592918 RAD54L2Q9Y4B4 1467 aa36.07■■■■□ 3.36
AP000547.3-201ENST00000592918 TARBP1Q13395 1621 aaKnown RBP36.05■■■■□ 3.36
AP000547.3-201ENST00000592918 ZNF608Q9ULD9 1512 aaPredicted RBP35.98■■■■□ 3.35
AP000547.3-201ENST00000592918 EIF4G3O43432 1585 aaKnown RBP35.87■■■■□ 3.33
AP000547.3-201ENST00000592918 WDR97A6NE52 1622 aa35.86■■■■□ 3.33
AP000547.3-201ENST00000592918 ABCA10Q8WWZ4 1543 aa35.84■■■■□ 3.33
AP000547.3-201ENST00000592918 TDRD9Q8NDG6 1382 aaKnown RBP35.84■■■■□ 3.33
AP000547.3-201ENST00000592918 AQRO60306 1485 aaKnown RBP eCLIP35.83■■■■□ 3.338e-8■■□□□ 12.7
AP000547.3-201ENST00000592918 TRIM41Q8WV44 630 aa35.73■■■■□ 3.31
AP000547.3-201ENST00000592918 ABCA5Q8WWZ7 1642 aa35.67■■■■□ 3.3
AP000547.3-201ENST00000592918 GAPVD1Q14C86 1478 aa35.66■■■■□ 3.3
AP000547.3-201ENST00000592918 GRIN2BQ13224 1484 aa35.6■■■■□ 3.29
AP000547.3-201ENST00000592918 PBRM1Q86U86 1689 aa35.58■■■■□ 3.29
AP000547.3-201ENST00000592918 CHIC1Q5VXU3 224 aa35.55■■■■□ 3.28
AP000547.3-201ENST00000592918 SNAPC4Q5SXM2 1469 aa35.52■■■■□ 3.28
AP000547.3-201ENST00000592918 KIF27Q86VH2 1401 aa35.5■■■■□ 3.27
AP000547.3-201ENST00000592918 MAGI1Q96QZ7 1491 aaPredicted RBP35.46■■■■□ 3.27
AP000547.3-201ENST00000592918 ERICH3Q5RHP9 1530 aa35.42■■■■□ 3.26
AP000547.3-201ENST00000592918 FBLN2P98095 1184 aa35.36■■■■□ 3.25
AP000547.3-201ENST00000592918 CHD1O14646 1710 aa35.33■■■■□ 3.25
AP000547.3-201ENST00000592918 SYNJ2O15056 1496 aa35.32■■■■□ 3.24
AP000547.3-201ENST00000592918 RUSC2Q8N2Y8 1516 aa35.32■■■■□ 3.24
AP000547.3-201ENST00000592918 ADAMTS12P58397 1594 aa35.31■■■■□ 3.24
AP000547.3-201ENST00000592918 CHMP7Q8WUX9 453 aaPredicted RBP35.3■■■■□ 3.24
AP000547.3-201ENST00000592918 IGF1RP08069 1367 aa35.29■■■■□ 3.24
AP000547.3-201ENST00000592918 FHAD1B1AJZ9 1412 aa35.26■■■■□ 3.23
AP000547.3-201ENST00000592918 OSCARQ8IYS5 282 aa35.23■■■■□ 3.23
AP000547.3-201ENST00000592918 CUL7Q14999 1698 aa35.19■■■■□ 3.22
AP000547.3-201ENST00000592918 GRIN2AQ12879 1464 aa35.15■■■■□ 3.22
AP000547.3-201ENST00000592918 CARMIL1Q5VZK9 1371 aa35.11■■■■□ 3.21
AP000547.3-201ENST00000592918 EEA1Q15075 1411 aa35.07■■■■□ 3.2
AP000547.3-201ENST00000592918 DNAJC5Q9H3Z4 198 aa35.06■■■■□ 3.2
AP000547.3-201ENST00000592918 FAM9AQ8IZU1 332 aaPredicted RBP35.02■■■■□ 3.2
AP000547.3-201ENST00000592918 CSRNP3Q8WYN3 585 aa34.99■■■■□ 3.19
AP000547.3-201ENST00000592918 CEP170Q5SW79 1584 aa34.97■■■■□ 3.19
AP000547.3-201ENST00000592918 NUP160Q12769 1436 aa34.96■■■■□ 3.19
AP000547.3-201ENST00000592918 RAPGEF2Q9Y4G8 1499 aa34.95■■■■□ 3.18
AP000547.3-201ENST00000592918 CLASP1Q7Z460 1538 aa34.93■■■■□ 3.18
AP000547.3-201ENST00000592918 PRXQ9BXM0 1461 aa34.9■■■■□ 3.18
AP000547.3-201ENST00000592918 KIAA0586Q9BVV6 1533 aa34.72■■■■□ 3.15
AP000547.3-201ENST00000592918 KIF21BO75037 1637 aa34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms