RNA–Protein interactions for RNA: ENST00000586035.1

PDCD5-204, Transcript of programmed cell death 5, humanhuman

TSL 3 BASIC

Gene PDCD5, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-204ENST00000586035 NISCHQ9Y2I1 1504 aa53.52■■■■■ 6.16
PDCD5-204ENST00000586035 CCDC180Q9P1Z9 1646 aa48.03■■■■■ 5.28
PDCD5-204ENST00000586035 ABCC9O60706 1549 aa47.91■■■■■ 5.26
PDCD5-204ENST00000586035 RB1CC1Q8TDY2 1594 aa45.62■■■■■ 4.89
PDCD5-204ENST00000586035 NACADO15069 1562 aa45.33■■■■■ 4.85
PDCD5-204ENST00000586035 DCAF8L2P0C7V8 631 aa44.99■■■■■ 4.79
PDCD5-204ENST00000586035 DNAJC5BQ9UF47 199 aa44.86■■■■■ 4.77
PDCD5-204ENST00000586035 UNC13AQ9UPW8 1703 aa44.78■■■■■ 4.76
PDCD5-204ENST00000586035 MYO15BQ96JP2 1530 aa44.72■■■■■ 4.75
PDCD5-204ENST00000586035 PABPN1Q86U42 306 aaKnown RBP eCLIP44.57■■■■■ 4.73
PDCD5-204ENST00000586035 ZCCHC6Q5VYS8 1495 aaKnown RBP44.4■■■■■ 4.7
PDCD5-204ENST00000586035 BICRAQ9NZM4 1560 aa44.39■■■■■ 4.7
PDCD5-204ENST00000586035 DCAF1Q9Y4B6 1507 aa44.19■■■■■ 4.67
PDCD5-204ENST00000586035 SCRIBQ14160 1630 aa43.78■■■■■ 4.6
PDCD5-204ENST00000586035 SHROOM4Q9ULL8 1493 aa43.68■■■■■ 4.58
PDCD5-204ENST00000586035 CC2D2AQ9P2K1 1620 aa43.32■■■■■ 4.53
PDCD5-204ENST00000586035 EIF4G1Q04637 1599 aaKnown RBP43.24■■■■■ 4.51
PDCD5-204ENST00000586035 CECR2Q9BXF3 1484 aa43.12■■■■■ 4.49
PDCD5-204ENST00000586035 NCAPD3P42695 1498 aa41.83■■■■■ 4.29
PDCD5-204ENST00000586035 SMARCA4P51532 1647 aa41.77■■■■■ 4.28
PDCD5-204ENST00000586035 ATAD2BQ9ULI0 1458 aa41.74■■■■■ 4.27
PDCD5-204ENST00000586035 SMARCA2P51531 1590 aa41.61■■■■■ 4.25
PDCD5-204ENST00000586035 HMGXB3Q12766 1538 aa41.57■■■■■ 4.25
PDCD5-204ENST00000586035 BAZ1AQ9NRL2 1556 aaPredicted RBP41.52■■■■■ 4.24
PDCD5-204ENST00000586035 PEG3Q9GZU2 1588 aa41.35■■■■■ 4.21
PDCD5-204ENST00000586035 BAZ1BQ9UIG0 1483 aaKnown RBP41.32■■■■■ 4.2
PDCD5-204ENST00000586035 ERCC6Q03468 1493 aa41.29■■■■■ 4.2
PDCD5-204ENST00000586035 MROH2BQ7Z745 1585 aa41.27■■■■■ 4.2
PDCD5-204ENST00000586035 NESP48681 1621 aa41.22■■■■■ 4.19
PDCD5-204ENST00000586035 CUX2O14529 1486 aa41.21■■■■■ 4.19
PDCD5-204ENST00000586035 DNAJC5Q9H3Z4 198 aa41.05■■■■■ 4.16
PDCD5-204ENST00000586035 LAMC3Q9Y6N6 1575 aa40.9■■■■■ 4.14
PDCD5-204ENST00000586035 THOC2Q8NI27 1593 aaKnown RBP40.82■■■■■ 4.13
PDCD5-204ENST00000586035 WIZO95785 1651 aa40.82■■■■■ 4.12
PDCD5-204ENST00000586035 KIF21AQ7Z4S6 1674 aa40.75■■■■■ 4.11
PDCD5-204ENST00000586035 PDS5BQ9NTI5 1447 aa40.58■■■■■ 4.09
PDCD5-204ENST00000586035 CADPSQ9ULU8 1353 aa40.54■■■■■ 4.08
PDCD5-204ENST00000586035 RSF1Q96T23 1441 aaPredicted RBP40.41■■■■■ 4.06
PDCD5-204ENST00000586035 MRC2Q9UBG0 1479 aa40.3■■■■■ 4.04
PDCD5-204ENST00000586035 TOP2AP11388 1531 aaKnown RBP40.26■■■■■ 4.03
PDCD5-204ENST00000586035 WDR62O43379 1518 aa40.24■■■■■ 4.03
PDCD5-204ENST00000586035 CEP164Q9UPV0 1460 aa40.14■■■■■ 4.02
PDCD5-204ENST00000586035 CFTRP13569 1480 aa40.13■■■■■ 4.02
PDCD5-204ENST00000586035 FANCD2Q9BXW9 1451 aa40.12■■■■■ 4.01
PDCD5-204ENST00000586035 PRDM2Q13029 1718 aa39.88■■■■□ 3.97
PDCD5-204ENST00000586035 URB2Q14146 1524 aaKnown RBP39.82■■■■□ 3.97
PDCD5-204ENST00000586035 CCDC88BA6NC98 1476 aa39.77■■■■□ 3.96
PDCD5-204ENST00000586035 TOPBP1Q92547 1522 aa39.39■■■■□ 3.9
PDCD5-204ENST00000586035 IFT140Q96RY7 1462 aa39.32■■■■□ 3.89
PDCD5-204ENST00000586035 ZNF608Q9ULD9 1512 aaPredicted RBP39.32■■■■□ 3.89
PDCD5-204ENST00000586035 TRIM41Q8WV44 630 aa39.29■■■■□ 3.88
PDCD5-204ENST00000586035 DNMBPQ6XZF7 1577 aa39.26■■■■□ 3.88
PDCD5-204ENST00000586035 OSCARQ8IYS5 282 aa39.26■■■■□ 3.88
PDCD5-204ENST00000586035 ABCC8Q09428 1581 aa39.22■■■■□ 3.87
PDCD5-204ENST00000586035 EIF4G3O43432 1585 aaKnown RBP39.14■■■■□ 3.86
PDCD5-204ENST00000586035 TARBP1Q13395 1621 aaKnown RBP39.09■■■■□ 3.85
PDCD5-204ENST00000586035 POLA1P09884 1462 aaPredicted RBP38.99■■■■□ 3.83
PDCD5-204ENST00000586035 AQRO60306 1485 aaKnown RBP eCLIP38.93■■■■□ 3.82
PDCD5-204ENST00000586035 RIMBP3CA6NJZ7 1639 aa38.91■■■■□ 3.82
PDCD5-204ENST00000586035 RIMBP3BA6NNM3 1639 aa38.91■■■■□ 3.82
PDCD5-204ENST00000586035 RIMBP3Q9UFD9 1639 aa38.91■■■■□ 3.82
PDCD5-204ENST00000586035 CHD1O14646 1710 aa38.88■■■■□ 3.81
PDCD5-204ENST00000586035 RAD54L2Q9Y4B4 1467 aa38.86■■■■□ 3.81
PDCD5-204ENST00000586035 CUX1P39880 1505 aa38.78■■■■□ 3.8
PDCD5-204ENST00000586035 ARHGEF11O15085 1522 aa38.77■■■■□ 3.8
PDCD5-204ENST00000586035 FGD5Q6ZNL6 1462 aa38.76■■■■□ 3.8
PDCD5-204ENST00000586035 SOGA1O94964 1423 aa38.74■■■■□ 3.79
PDCD5-204ENST00000586035 TDRD9Q8NDG6 1382 aaKnown RBP38.68■■■■□ 3.78
PDCD5-204ENST00000586035 WDR97A6NE52 1622 aa38.63■■■■□ 3.77
PDCD5-204ENST00000586035 SUPT5HO00267 1087 aaKnown RBP38.59■■■■□ 3.77
PDCD5-204ENST00000586035 SNAPC4Q5SXM2 1469 aa38.56■■■■□ 3.76
PDCD5-204ENST00000586035 FBLN2P98095 1184 aa38.56■■■■□ 3.76
PDCD5-204ENST00000586035 GRIN2BQ13224 1484 aa38.42■■■■□ 3.74
PDCD5-204ENST00000586035 MAGI1Q96QZ7 1491 aaPredicted RBP38.42■■■■□ 3.74
PDCD5-204ENST00000586035 PBRM1Q86U86 1689 aa38.41■■■■□ 3.74
PDCD5-204ENST00000586035 ARAP1Q96P48 1450 aa38.41■■■■□ 3.74
PDCD5-204ENST00000586035 CLASP1Q7Z460 1538 aa38.38■■■■□ 3.73
PDCD5-204ENST00000586035 CYB5RLQ6IPT4 315 aa38.37■■■■□ 3.73
PDCD5-204ENST00000586035 ABCA5Q8WWZ7 1642 aa38.32■■■■□ 3.73
PDCD5-204ENST00000586035 ABCA10Q8WWZ4 1543 aa38.32■■■■□ 3.72
PDCD5-204ENST00000586035 GAPVD1Q14C86 1478 aa38.31■■■■□ 3.72
PDCD5-204ENST00000586035 SYNJ2O15056 1496 aa38.3■■■■□ 3.72
PDCD5-204ENST00000586035 SYNJ1O43426 1573 aa38.3■■■■□ 3.72
PDCD5-204ENST00000586035 CHMP7Q8WUX9 453 aaPredicted RBP38.28■■■■□ 3.72
PDCD5-204ENST00000586035 BIVM-ERCC5R4GMW8 1640 aa38.2■■■■□ 3.7
PDCD5-204ENST00000586035 TOP2BQ02880 1626 aa38.16■■■■□ 3.7
PDCD5-204ENST00000586035 WRNQ14191 1432 aaPredicted RBP eCLIP38.12■■■■□ 3.69
PDCD5-204ENST00000586035 ADAMTS12P58397 1594 aa38.02■■■■□ 3.68
PDCD5-204ENST00000586035 GRIN2AQ12879 1464 aa37.96■■■■□ 3.67
PDCD5-204ENST00000586035 CEP170Q5SW79 1584 aa37.88■■■■□ 3.65
PDCD5-204ENST00000586035 TRHP20396 242 aaPredicted RBP37.87■■■■□ 3.65
PDCD5-204ENST00000586035 NUP160Q12769 1436 aa37.84■■■■□ 3.65
PDCD5-204ENST00000586035 ERICH3Q5RHP9 1530 aa37.82■■■■□ 3.65
PDCD5-204ENST00000586035 ERCC6L2Q5T890 1561 aa37.82■■■■□ 3.65
PDCD5-204ENST00000586035 FHAD1B1AJZ9 1412 aa37.81■■■■□ 3.64
PDCD5-204ENST00000586035 SHROOM2Q13796 1616 aa37.72■■■■□ 3.63
PDCD5-204ENST00000586035 RUSC2Q8N2Y8 1516 aa37.49■■■■□ 3.59
PDCD5-204ENST00000586035 PRG4Q92954 1404 aaPredicted RBP37.43■■■■□ 3.58
PDCD5-204ENST00000586035 JPH4Q96JJ6 628 aa37.35■■■■□ 3.57
PDCD5-204ENST00000586035 CUL7Q14999 1698 aa37.33■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms