RNA–Protein interactions for RNA: ENST00000398941.6

HSCB-202, Transcript of HscB mitochondrial iron-sulfur cluster cochaperone, humanhuman

TSL 2 BASIC

Gene HSCB, Length 955 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSCB-202ENST00000398941 NISCHQ9Y2I1 1504 aa52.39■■■■■ 5.98
HSCB-202ENST00000398941 CCDC180Q9P1Z9 1646 aa46.82■■■■■ 5.09
HSCB-202ENST00000398941 ABCC9O60706 1549 aa46.26■■■■■ 5
HSCB-202ENST00000398941 RB1CC1Q8TDY2 1594 aa44.31■■■■■ 4.68
HSCB-202ENST00000398941 NACADO15069 1562 aa44.15■■■■■ 4.66
HSCB-202ENST00000398941 DCAF8L2P0C7V8 631 aa43.86■■■■■ 4.61
HSCB-202ENST00000398941 MYO15BQ96JP2 1530 aa43.76■■■■■ 4.6
HSCB-202ENST00000398941 ZCCHC6Q5VYS8 1495 aaKnown RBP43.54■■■■■ 4.56
HSCB-202ENST00000398941 DCAF1Q9Y4B6 1507 aa43.37■■■■■ 4.53
HSCB-202ENST00000398941 UNC13AQ9UPW8 1703 aa43.27■■■■■ 4.52
HSCB-202ENST00000398941 PABPN1Q86U42 306 aaKnown RBP eCLIP43.11■■■■■ 4.49
HSCB-202ENST00000398941 BICRAQ9NZM4 1560 aa42.99■■■■■ 4.47
HSCB-202ENST00000398941 DNAJC5BQ9UF47 199 aa42.94■■■■■ 4.46
HSCB-202ENST00000398941 SCRIBQ14160 1630 aa42.62■■■■■ 4.41
HSCB-202ENST00000398941 SHROOM4Q9ULL8 1493 aa42.55■■■■■ 4.4
HSCB-202ENST00000398941 EIF4G1Q04637 1599 aaKnown RBP41.9■■■■■ 4.3
HSCB-202ENST00000398941 CC2D2AQ9P2K1 1620 aa41.84■■■■■ 4.29
HSCB-202ENST00000398941 CECR2Q9BXF3 1484 aa41.66■■■■■ 4.26
HSCB-202ENST00000398941 NCAPD3P42695 1498 aa40.76■■■■■ 4.12
HSCB-202ENST00000398941 SMARCA4P51532 1647 aa40.75■■■■■ 4.11
HSCB-202ENST00000398941 ATAD2BQ9ULI0 1458 aa40.68■■■■■ 4.1
HSCB-202ENST00000398941 BAZ1AQ9NRL2 1556 aaPredicted RBP40.64■■■■■ 4.1
HSCB-202ENST00000398941 SMARCA2P51531 1590 aa40.61■■■■■ 4.09
HSCB-202ENST00000398941 HMGXB3Q12766 1538 aa40.51■■■■■ 4.08
HSCB-202ENST00000398941 PEG3Q9GZU2 1588 aa40.41■■■■■ 4.06
HSCB-202ENST00000398941 MROH2BQ7Z745 1585 aa40.34■■■■■ 4.05
HSCB-202ENST00000398941 BAZ1BQ9UIG0 1483 aaKnown RBP40.3■■■■■ 4.04
HSCB-202ENST00000398941 ERCC6Q03468 1493 aa39.92■■■■□ 3.98
HSCB-202ENST00000398941 NESP48681 1621 aa39.88■■■■□ 3.97
HSCB-202ENST00000398941 WIZO95785 1651 aa39.86■■■■□ 3.97
HSCB-202ENST00000398941 LAMC3Q9Y6N6 1575 aa39.75■■■■□ 3.95
HSCB-202ENST00000398941 CUX2O14529 1486 aa39.75■■■■□ 3.95
HSCB-202ENST00000398941 RSF1Q96T23 1441 aaPredicted RBP39.7■■■■□ 3.95
HSCB-202ENST00000398941 CADPSQ9ULU8 1353 aa39.51■■■■□ 3.92
HSCB-202ENST00000398941 PDS5BQ9NTI5 1447 aa39.48■■■■□ 3.91
HSCB-202ENST00000398941 TOP2AP11388 1531 aaKnown RBP39.45■■■■□ 3.91
HSCB-202ENST00000398941 THOC2Q8NI27 1593 aaKnown RBP39.44■■■■□ 3.9
HSCB-202ENST00000398941 KIF21AQ7Z4S6 1674 aa39.39■■■■□ 3.9
HSCB-202ENST00000398941 CFTRP13569 1480 aa39.19■■■■□ 3.86
HSCB-202ENST00000398941 MRC2Q9UBG0 1479 aa39.11■■■■□ 3.85
HSCB-202ENST00000398941 DNAJC5Q9H3Z4 198 aa39.11■■■■□ 3.85
HSCB-202ENST00000398941 FANCD2Q9BXW9 1451 aa39.05■■■■□ 3.84
HSCB-202ENST00000398941 CEP164Q9UPV0 1460 aa39.05■■■■□ 3.84
HSCB-202ENST00000398941 WDR62O43379 1518 aa39.03■■■■□ 3.84
HSCB-202ENST00000398941 CCDC88BA6NC98 1476 aa38.97■■■■□ 3.83
HSCB-202ENST00000398941 PRDM2Q13029 1718 aa38.81■■■■□ 3.8
HSCB-202ENST00000398941 URB2Q14146 1524 aaKnown RBP38.69■■■■□ 3.78
HSCB-202ENST00000398941 TOPBP1Q92547 1522 aa38.37■■■■□ 3.73
HSCB-202ENST00000398941 ABCC8Q09428 1581 aa38.35■■■■□ 3.73
HSCB-202ENST00000398941 DNMBPQ6XZF7 1577 aa38.29■■■■□ 3.72
HSCB-202ENST00000398941 IFT140Q96RY7 1462 aa38.27■■■■□ 3.72
HSCB-202ENST00000398941 SUPT5HO00267 1087 aaKnown RBP38.19■■■■□ 3.7
HSCB-202ENST00000398941 ZNF608Q9ULD9 1512 aaPredicted RBP38.12■■■■□ 3.69
HSCB-202ENST00000398941 POLA1P09884 1462 aaPredicted RBP38.02■■■■□ 3.68
HSCB-202ENST00000398941 TARBP1Q13395 1621 aaKnown RBP38■■■■□ 3.67
HSCB-202ENST00000398941 EIF4G3O43432 1585 aaKnown RBP37.96■■■■□ 3.67
HSCB-202ENST00000398941 OSCARQ8IYS5 282 aa37.95■■■■□ 3.67
HSCB-202ENST00000398941 CUX1P39880 1505 aa37.88■■■■□ 3.65
HSCB-202ENST00000398941 AQRO60306 1485 aaKnown RBP eCLIP37.83■■■■□ 3.65
HSCB-202ENST00000398941 FGD5Q6ZNL6 1462 aa37.83■■■■□ 3.65
HSCB-202ENST00000398941 RAD54L2Q9Y4B4 1467 aa37.83■■■■□ 3.65
HSCB-202ENST00000398941 SOGA1O94964 1423 aa37.82■■■■□ 3.64
HSCB-202ENST00000398941 WDR97A6NE52 1622 aa37.71■■■■□ 3.63
HSCB-202ENST00000398941 TDRD9Q8NDG6 1382 aaKnown RBP37.67■■■■□ 3.62
HSCB-202ENST00000398941 CHD1O14646 1710 aa37.55■■■■□ 3.6
HSCB-202ENST00000398941 TRIM41Q8WV44 630 aa37.52■■■■□ 3.6
HSCB-202ENST00000398941 SNAPC4Q5SXM2 1469 aa37.48■■■■□ 3.59
HSCB-202ENST00000398941 ABCA10Q8WWZ4 1543 aa37.47■■■■□ 3.59
HSCB-202ENST00000398941 GRIN2BQ13224 1484 aa37.46■■■■□ 3.59
HSCB-202ENST00000398941 WRNQ14191 1432 aaPredicted RBP eCLIP37.44■■■■□ 3.58
HSCB-202ENST00000398941 MAGI1Q96QZ7 1491 aaPredicted RBP37.44■■■■□ 3.58
HSCB-202ENST00000398941 TOP2BQ02880 1626 aa37.43■■■■□ 3.58
HSCB-202ENST00000398941 BIVM-ERCC5R4GMW8 1640 aa37.43■■■■□ 3.58
HSCB-202ENST00000398941 FBLN2P98095 1184 aa37.42■■■■□ 3.58
HSCB-202ENST00000398941 RIMBP3CA6NJZ7 1639 aa37.41■■■■□ 3.58
HSCB-202ENST00000398941 RIMBP3BA6NNM3 1639 aa37.41■■■■□ 3.58
HSCB-202ENST00000398941 RIMBP3Q9UFD9 1639 aa37.41■■■■□ 3.58
HSCB-202ENST00000398941 GAPVD1Q14C86 1478 aa37.39■■■■□ 3.58
HSCB-202ENST00000398941 SYNJ1O43426 1573 aa37.37■■■■□ 3.57
HSCB-202ENST00000398941 ARHGEF11O15085 1522 aa37.36■■■■□ 3.57
HSCB-202ENST00000398941 ABCA5Q8WWZ7 1642 aa37.36■■■■□ 3.57
HSCB-202ENST00000398941 PBRM1Q86U86 1689 aa37.33■■■■□ 3.57
HSCB-202ENST00000398941 SYNJ2O15056 1496 aa37.3■■■■□ 3.56
HSCB-202ENST00000398941 CHMP7Q8WUX9 453 aaPredicted RBP37.27■■■■□ 3.56
HSCB-202ENST00000398941 CLASP1Q7Z460 1538 aa37.19■■■■□ 3.54
HSCB-202ENST00000398941 ADAMTS12P58397 1594 aa37.04■■■■□ 3.52
HSCB-202ENST00000398941 ARAP1Q96P48 1450 aa37.03■■■■□ 3.52
HSCB-202ENST00000398941 ERICH3Q5RHP9 1530 aa37.01■■■■□ 3.52
HSCB-202ENST00000398941 CYB5RLQ6IPT4 315 aa37■■■■□ 3.51
HSCB-202ENST00000398941 GRIN2AQ12879 1464 aa36.99■■■■□ 3.51
HSCB-202ENST00000398941 FHAD1B1AJZ9 1412 aa36.95■■■■□ 3.51
HSCB-202ENST00000398941 NUP160Q12769 1436 aa36.87■■■■□ 3.49
HSCB-202ENST00000398941 CEP170Q5SW79 1584 aa36.82■■■■□ 3.48
HSCB-202ENST00000398941 KIF27Q86VH2 1401 aa36.69■■■■□ 3.46
HSCB-202ENST00000398941 SHROOM2Q13796 1616 aa36.64■■■■□ 3.46
HSCB-202ENST00000398941 IGF1RP08069 1367 aa36.62■■■■□ 3.45
HSCB-202ENST00000398941 ERCC6L2Q5T890 1561 aa36.59■■■■□ 3.45
HSCB-202ENST00000398941 CUL7Q14999 1698 aa36.55■■■■□ 3.44
HSCB-202ENST00000398941 RUSC2Q8N2Y8 1516 aa36.5■■■■□ 3.43
HSCB-202ENST00000398941 JPH4Q96JJ6 628 aa36.43■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms