RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 NISCHQ9Y2I1 1504 aa47.6■■■■■ 5.21
PPP1R3F-203ENST00000466508 CCDC180Q9P1Z9 1646 aa41.48■■■■■ 4.23
PPP1R3F-203ENST00000466508 ZCCHC6Q5VYS8 1495 aaKnown RBP40.03■■■■■ 4
PPP1R3F-203ENST00000466508 ABCC9O60706 1549 aa39.86■■■■□ 3.97
PPP1R3F-203ENST00000466508 DCAF1Q9Y4B6 1507 aa39.38■■■■□ 3.89
PPP1R3F-203ENST00000466508 DCAF8L2P0C7V8 631 aa39.17■■■■□ 3.86
PPP1R3F-203ENST00000466508 SHROOM4Q9ULL8 1493 aa38.91■■■■□ 3.82
PPP1R3F-203ENST00000466508 MYO15BQ96JP2 1530 aa38.85■■■■□ 3.81
PPP1R3F-203ENST00000466508 NACADO15069 1562 aa38.56■■■■□ 3.76
PPP1R3F-203ENST00000466508 RB1CC1Q8TDY2 1594 aa38.28■■■■□ 3.72
PPP1R3F-203ENST00000466508 SCRIBQ14160 1630 aa38.14■■■■□ 3.7
PPP1R3F-203ENST00000466508 UNC13AQ9UPW8 1703 aa37.5■■■■□ 3.59
PPP1R3F-203ENST00000466508 SUPT5HO00267 1087 aaKnown RBP37.5■■■■□ 3.59
PPP1R3F-203ENST00000466508 PABPN1Q86U42 306 aaKnown RBP eCLIP37.25■■■■□ 3.55
PPP1R3F-203ENST00000466508 BICRAQ9NZM4 1560 aa37.1■■■■□ 3.53
PPP1R3F-203ENST00000466508 RSF1Q96T23 1441 aaPredicted RBP36.97■■■■□ 3.51
PPP1R3F-203ENST00000466508 CECR2Q9BXF3 1484 aa36.96■■■■□ 3.51
PPP1R3F-203ENST00000466508 MROH2BQ7Z745 1585 aa36.78■■■■□ 3.48
PPP1R3F-203ENST00000466508 BAZ1AQ9NRL2 1556 aaPredicted RBP36.76■■■■□ 3.47
PPP1R3F-203ENST00000466508 DNAJC5BQ9UF47 199 aa36.69■■■■□ 3.46
PPP1R3F-203ENST00000466508 SMARCA4P51532 1647 aa36.58■■■■□ 3.45
PPP1R3F-203ENST00000466508 WIZO95785 1651 aa36.52■■■■□ 3.44
PPP1R3F-203ENST00000466508 EIF4G1Q04637 1599 aaKnown RBP36.15■■■■□ 3.38
PPP1R3F-203ENST00000466508 PEG3Q9GZU2 1588 aa36.13■■■■□ 3.37
PPP1R3F-203ENST00000466508 TOP2AP11388 1531 aaKnown RBP36.13■■■■□ 3.37
PPP1R3F-203ENST00000466508 CC2D2AQ9P2K1 1620 aa36.04■■■■□ 3.36
PPP1R3F-203ENST00000466508 CHIC1Q5VXU3 224 aa35.99■■■■□ 3.35
PPP1R3F-203ENST00000466508 SMARCA2P51531 1590 aa35.91■■■■□ 3.34
PPP1R3F-203ENST00000466508 ATAD2BQ9ULI0 1458 aa35.9■■■■□ 3.34
PPP1R3F-203ENST00000466508 CCDC88BA6NC98 1476 aa35.74■■■■□ 3.31
PPP1R3F-203ENST00000466508 BAZ1BQ9UIG0 1483 aaKnown RBP35.72■■■■□ 3.31
PPP1R3F-203ENST00000466508 HMGXB3Q12766 1538 aa35.57■■■■□ 3.28
PPP1R3F-203ENST00000466508 NCAPD3P42695 1498 aa35.56■■■■□ 3.28
PPP1R3F-203ENST00000466508 TRIM41Q8WV44 630 aa35.26■■■■□ 3.23
PPP1R3F-203ENST00000466508 ABCC8Q09428 1581 aa35.07■■■■□ 3.2
PPP1R3F-203ENST00000466508 CFTRP13569 1480 aa34.83■■■■□ 3.17
PPP1R3F-203ENST00000466508 WRNQ14191 1432 aaPredicted RBP eCLIP34.8■■■■□ 3.16
PPP1R3F-203ENST00000466508 PRDM2Q13029 1718 aa34.76■■■■□ 3.16
PPP1R3F-203ENST00000466508 SYNJ1O43426 1573 aa34.69■■■■□ 3.14
PPP1R3F-203ENST00000466508 CADPSQ9ULU8 1353 aa34.65■■■■□ 3.14
PPP1R3F-203ENST00000466508 LOC105371045A0A1W2PR82 267 aa34.61■■■■□ 3.13
PPP1R3F-203ENST00000466508 FAM9AQ8IZU1 332 aaPredicted RBP34.6■■■■□ 3.13
PPP1R3F-203ENST00000466508 TOP2BQ02880 1626 aa34.54■■■■□ 3.12
PPP1R3F-203ENST00000466508 BIVM-ERCC5R4GMW8 1640 aa34.51■■■■□ 3.12
PPP1R3F-203ENST00000466508 NESP48681 1621 aa34.45■■■■□ 3.11
PPP1R3F-203ENST00000466508 SOGA1O94964 1423 aa34.41■■■■□ 3.1
PPP1R3F-203ENST00000466508 EEA1Q15075 1411 aa34.4■■■■□ 3.1
PPP1R3F-203ENST00000466508 CUX1P39880 1505 aa34.39■■■■□ 3.1
PPP1R3F-203ENST00000466508 ERCC6Q03468 1493 aa34.39■■■■□ 3.1
PPP1R3F-203ENST00000466508 LAMC3Q9Y6N6 1575 aa34.36■■■■□ 3.09
PPP1R3F-203ENST00000466508 FANCD2Q9BXW9 1451 aa34.29■■■■□ 3.08
PPP1R3F-203ENST00000466508 RUSC2Q8N2Y8 1516 aa34.28■■■■□ 3.08
PPP1R3F-203ENST00000466508 CSRNP3Q8WYN3 585 aa34.15■■■■□ 3.06
PPP1R3F-203ENST00000466508 PDS5BQ9NTI5 1447 aa34.14■■■■□ 3.06
PPP1R3F-203ENST00000466508 EHMT2Q96KQ7 1210 aa34.1■■■■□ 3.05
PPP1R3F-203ENST00000466508 CEP164Q9UPV0 1460 aa34.06■■■■□ 3.04
PPP1R3F-203ENST00000466508 DNMBPQ6XZF7 1577 aa34.04■■■■□ 3.04
PPP1R3F-203ENST00000466508 KIF21AQ7Z4S6 1674 aa34.03■■■■□ 3.04
PPP1R3F-203ENST00000466508 CUX2O14529 1486 aa34.03■■■■□ 3.04
PPP1R3F-203ENST00000466508 KIF21BO75037 1637 aa33.98■■■■□ 3.03
PPP1R3F-203ENST00000466508 FGD5Q6ZNL6 1462 aa33.98■■■■□ 3.03
PPP1R3F-203ENST00000466508 TOPBP1Q92547 1522 aa33.95■■■■□ 3.02
PPP1R3F-203ENST00000466508 GOLGA3Q08378 1498 aa33.93■■■■□ 3.02
PPP1R3F-203ENST00000466508 THOC2Q8NI27 1593 aaKnown RBP33.92■■■■□ 3.02
PPP1R3F-203ENST00000466508 KIF27Q86VH2 1401 aa33.91■■■■□ 3.02
PPP1R3F-203ENST00000466508 URB2Q14146 1524 aaKnown RBP33.86■■■■□ 3.01
PPP1R3F-203ENST00000466508 TNIKQ9UKE5 1360 aa33.84■■■■□ 3.01
PPP1R3F-203ENST00000466508 POLA1P09884 1462 aaPredicted RBP33.8■■■■□ 3
PPP1R3F-203ENST00000466508 MRC2Q9UBG0 1479 aa33.77■■■■□ 3
PPP1R3F-203ENST00000466508 PRXQ9BXM0 1461 aa33.73■■■□□ 2.99
PPP1R3F-203ENST00000466508 UBTFP17480 764 aaKnown RBP33.73■■■□□ 2.99
PPP1R3F-203ENST00000466508 RAPGEF2Q9Y4G8 1499 aa33.72■■■□□ 2.99
PPP1R3F-203ENST00000466508 ERICH3Q5RHP9 1530 aa33.71■■■□□ 2.99
PPP1R3F-203ENST00000466508 CEP162Q5TB80 1403 aa33.69■■■□□ 2.98
PPP1R3F-203ENST00000466508 ABCA10Q8WWZ4 1543 aa33.69■■■□□ 2.98
PPP1R3F-203ENST00000466508 RAD54L2Q9Y4B4 1467 aa33.66■■■□□ 2.98
PPP1R3F-203ENST00000466508 WDR62O43379 1518 aa33.66■■■□□ 2.98
PPP1R3F-203ENST00000466508 WDR97A6NE52 1622 aa33.62■■■□□ 2.97
PPP1R3F-203ENST00000466508 IGF1RP08069 1367 aa33.56■■■□□ 2.96
PPP1R3F-203ENST00000466508 TARBP1Q13395 1621 aaKnown RBP33.45■■■□□ 2.95
PPP1R3F-203ENST00000466508 ABCA5Q8WWZ7 1642 aa33.43■■■□□ 2.94
PPP1R3F-203ENST00000466508 CARMIL1Q5VZK9 1371 aa33.41■■■□□ 2.94
PPP1R3F-203ENST00000466508 CLIP1P30622 1438 aa33.38■■■□□ 2.93
PPP1R3F-203ENST00000466508 CUL7Q14999 1698 aa33.37■■■□□ 2.93
PPP1R3F-203ENST00000466508 GAPVD1Q14C86 1478 aa33.31■■■□□ 2.92
PPP1R3F-203ENST00000466508 TDRD9Q8NDG6 1382 aaKnown RBP33.31■■■□□ 2.92
PPP1R3F-203ENST00000466508 IFT140Q96RY7 1462 aa33.23■■■□□ 2.91
PPP1R3F-203ENST00000466508 PCGF6Q9BYE7 350 aa33.2■■■□□ 2.91
PPP1R3F-203ENST00000466508 TRIM26Q12899 539 aaPredicted RBP33.18■■■□□ 2.9
PPP1R3F-203ENST00000466508 PBRM1Q86U86 1689 aa33.17■■■□□ 2.9
PPP1R3F-203ENST00000466508 DNAJC5Q9H3Z4 198 aa33.16■■■□□ 2.9
PPP1R3F-203ENST00000466508 VPS8Q8N3P4 1428 aa33.13■■■□□ 2.89
PPP1R3F-203ENST00000466508 RANGAP1P46060 587 aaPredicted RBP33.11■■■□□ 2.89
PPP1R3F-203ENST00000466508 AQRO60306 1485 aaKnown RBP eCLIP33.08■■■□□ 2.89
PPP1R3F-203ENST00000466508 ARAP1Q96P48 1450 aa33.05■■■□□ 2.88
PPP1R3F-203ENST00000466508 CTTNBP2Q8WZ74 1663 aa33.04■■■□□ 2.88
PPP1R3F-203ENST00000466508 ZNF608Q9ULD9 1512 aaPredicted RBP33.04■■■□□ 2.88
PPP1R3F-203ENST00000466508 GRIN2BQ13224 1484 aa33.02■■■□□ 2.88
PPP1R3F-203ENST00000466508 ARHGAP35Q9NRY4 1499 aa33.02■■■□□ 2.88
PPP1R3F-203ENST00000466508 EIF4G3O43432 1585 aaKnown RBP32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms