RNA–Protein interactions for RNA: ENST00000504102.5

SPOP-206, Transcript of speckle type BTB/POZ protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOP, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-206ENST00000504102 NISCHQ9Y2I1 1504 aa47.78■■■■■ 5.24
SPOP-206ENST00000504102 CCDC180Q9P1Z9 1646 aa41.62■■■■■ 4.25
SPOP-206ENST00000504102 ZCCHC6Q5VYS8 1495 aaKnown RBP40.2■■■■■ 4.03
SPOP-206ENST00000504102 ABCC9O60706 1549 aa40.12■■■■■ 4.01
SPOP-206ENST00000504102 DCAF1Q9Y4B6 1507 aa39.56■■■■□ 3.92
SPOP-206ENST00000504102 DCAF8L2P0C7V8 631 aa39.24■■■■□ 3.87
SPOP-206ENST00000504102 MYO15BQ96JP2 1530 aa39.05■■■■□ 3.84
SPOP-206ENST00000504102 SHROOM4Q9ULL8 1493 aa38.97■■■■□ 3.83
SPOP-206ENST00000504102 NACADO15069 1562 aa38.72■■■■□ 3.79
SPOP-206ENST00000504102 RB1CC1Q8TDY2 1594 aa38.63■■■■□ 3.77
SPOP-206ENST00000504102 SCRIBQ14160 1630 aa38.25■■■■□ 3.71
SPOP-206ENST00000504102 UNC13AQ9UPW8 1703 aa37.89■■■■□ 3.66
SPOP-206ENST00000504102 PABPN1Q86U42 306 aaKnown RBP eCLIP37.59■■■■□ 3.61
SPOP-206ENST00000504102 BICRAQ9NZM4 1560 aa37.55■■■■□ 3.6
SPOP-206ENST00000504102 SUPT5HO00267 1087 aaKnown RBP37.52■■■■□ 3.6
SPOP-206ENST00000504102 RSF1Q96T23 1441 aaPredicted RBP37.11■■■■□ 3.53
SPOP-206ENST00000504102 CECR2Q9BXF3 1484 aa37.11■■■■□ 3.53
SPOP-206ENST00000504102 MROH2BQ7Z745 1585 aa36.91■■■■□ 3.5
SPOP-206ENST00000504102 BAZ1AQ9NRL2 1556 aaPredicted RBP36.88■■■■□ 3.49
SPOP-206ENST00000504102 SMARCA4P51532 1647 aa36.7■■■■□ 3.47
SPOP-206ENST00000504102 WIZO95785 1651 aa36.6■■■■□ 3.45
SPOP-206ENST00000504102 DNAJC5BQ9UF47 199 aa36.51■■■■□ 3.44
SPOP-206ENST00000504102 EIF4G1Q04637 1599 aaKnown RBP36.5■■■■□ 3.43
SPOP-206ENST00000504102 PEG3Q9GZU2 1588 aa36.3■■■■□ 3.4
SPOP-206ENST00000504102 CC2D2AQ9P2K1 1620 aa36.27■■■■□ 3.4
SPOP-206ENST00000504102 TOP2AP11388 1531 aaKnown RBP36.26■■■■□ 3.4
SPOP-206ENST00000504102 ATAD2BQ9ULI0 1458 aa36.08■■■■□ 3.37
SPOP-206ENST00000504102 CHIC1Q5VXU3 224 aa36.05■■■■□ 3.36
SPOP-206ENST00000504102 SMARCA2P51531 1590 aa36.05■■■■□ 3.36
SPOP-206ENST00000504102 CCDC88BA6NC98 1476 aa35.87■■■■□ 3.33
SPOP-206ENST00000504102 BAZ1BQ9UIG0 1483 aaKnown RBP35.86■■■■□ 3.33
SPOP-206ENST00000504102 NCAPD3P42695 1498 aa35.75■■■■□ 3.31
SPOP-206ENST00000504102 HMGXB3Q12766 1538 aa35.73■■■■□ 3.31
SPOP-206ENST00000504102 TRIM41Q8WV44 630 aa35.29■■■■□ 3.24
SPOP-206ENST00000504102 ABCC8Q09428 1581 aa35.14■■■■□ 3.22
SPOP-206ENST00000504102 CFTRP13569 1480 aa34.99■■■■□ 3.19
SPOP-206ENST00000504102 WRNQ14191 1432 aaPredicted RBP eCLIP34.91■■■■□ 3.18
SPOP-206ENST00000504102 NESP48681 1621 aa34.87■■■■□ 3.17
SPOP-206ENST00000504102 CADPSQ9ULU8 1353 aa34.82■■■■□ 3.16
SPOP-206ENST00000504102 PRDM2Q13029 1718 aa34.79■■■■□ 3.16
SPOP-206ENST00000504102 SYNJ1O43426 1573 aa34.78■■■■□ 3.16
SPOP-206ENST00000504102 LAMC3Q9Y6N6 1575 aa34.69■■■■□ 3.14
SPOP-206ENST00000504102 LOC105371045A0A1W2PR82 267 aa34.63■■■■□ 3.13
SPOP-206ENST00000504102 TOP2BQ02880 1626 aa34.63■■■■□ 3.13
SPOP-206ENST00000504102 FAM9AQ8IZU1 332 aaPredicted RBP34.61■■■■□ 3.13
SPOP-206ENST00000504102 BIVM-ERCC5R4GMW8 1640 aa34.6■■■■□ 3.13
SPOP-206ENST00000504102 CUX1P39880 1505 aa34.52■■■■□ 3.12
SPOP-206ENST00000504102 SOGA1O94964 1423 aa34.51■■■■□ 3.11
SPOP-206ENST00000504102 EEA1Q15075 1411 aa34.49■■■■□ 3.11
SPOP-206ENST00000504102 ERCC6Q03468 1493 aa34.48■■■■□ 3.11
SPOP-206ENST00000504102 KIF21AQ7Z4S6 1674 aa34.44■■■■□ 3.1
SPOP-206ENST00000504102 FANCD2Q9BXW9 1451 aa34.43■■■■□ 3.1
SPOP-206ENST00000504102 PDS5BQ9NTI5 1447 aa34.42■■■■□ 3.1
SPOP-206ENST00000504102 RUSC2Q8N2Y8 1516 aa34.37■■■■□ 3.09
SPOP-206ENST00000504102 CEP164Q9UPV0 1460 aa34.23■■■■□ 3.07
SPOP-206ENST00000504102 CSRNP3Q8WYN3 585 aa34.23■■■■□ 3.07
SPOP-206ENST00000504102 THOC2Q8NI27 1593 aaKnown RBP34.18■■■■□ 3.06
SPOP-206ENST00000504102 DNMBPQ6XZF7 1577 aa34.16■■■■□ 3.06
SPOP-206ENST00000504102 FGD5Q6ZNL6 1462 aa34.1■■■■□ 3.05
SPOP-206ENST00000504102 MRC2Q9UBG0 1479 aa34.1■■■■□ 3.05
SPOP-206ENST00000504102 TOPBP1Q92547 1522 aa34.09■■■■□ 3.05
SPOP-206ENST00000504102 EHMT2Q96KQ7 1210 aa34.08■■■■□ 3.05
SPOP-206ENST00000504102 KIF21BO75037 1637 aa34.05■■■■□ 3.04
SPOP-206ENST00000504102 URB2Q14146 1524 aaKnown RBP34.02■■■■□ 3.04
SPOP-206ENST00000504102 KIF27Q86VH2 1401 aa34.01■■■■□ 3.04
SPOP-206ENST00000504102 GOLGA3Q08378 1498 aa34■■■■□ 3.03
SPOP-206ENST00000504102 WDR62O43379 1518 aa33.98■■■■□ 3.03
SPOP-206ENST00000504102 POLA1P09884 1462 aaPredicted RBP33.94■■■■□ 3.02
SPOP-206ENST00000504102 TNIKQ9UKE5 1360 aa33.92■■■■□ 3.02
SPOP-206ENST00000504102 CUX2O14529 1486 aa33.89■■■■□ 3.02
SPOP-206ENST00000504102 PRXQ9BXM0 1461 aa33.86■■■■□ 3.01
SPOP-206ENST00000504102 ABCA10Q8WWZ4 1543 aa33.83■■■■□ 3.01
SPOP-206ENST00000504102 RAPGEF2Q9Y4G8 1499 aa33.82■■■■□ 3
SPOP-206ENST00000504102 ERICH3Q5RHP9 1530 aa33.8■■■■□ 3
SPOP-206ENST00000504102 RAD54L2Q9Y4B4 1467 aa33.8■■■■□ 3
SPOP-206ENST00000504102 CEP162Q5TB80 1403 aa33.75■■■□□ 2.99
SPOP-206ENST00000504102 UBTFP17480 764 aaKnown RBP33.75■■■□□ 2.99
SPOP-206ENST00000504102 WDR97A6NE52 1622 aa33.72■■■□□ 2.99
SPOP-206ENST00000504102 IGF1RP08069 1367 aa33.71■■■□□ 2.99
SPOP-206ENST00000504102 TARBP1Q13395 1621 aaKnown RBP33.58■■■□□ 2.97
SPOP-206ENST00000504102 ABCA5Q8WWZ7 1642 aa33.55■■■□□ 2.96
SPOP-206ENST00000504102 CARMIL1Q5VZK9 1371 aa33.52■■■□□ 2.96
SPOP-206ENST00000504102 IFT140Q96RY7 1462 aa33.47■■■□□ 2.95
SPOP-206ENST00000504102 CLIP1P30622 1438 aa33.45■■■□□ 2.95
SPOP-206ENST00000504102 TDRD9Q8NDG6 1382 aaKnown RBP33.44■■■□□ 2.94
SPOP-206ENST00000504102 CUL7Q14999 1698 aa33.44■■■□□ 2.94
SPOP-206ENST00000504102 GAPVD1Q14C86 1478 aa33.43■■■□□ 2.94
SPOP-206ENST00000504102 ZNF608Q9ULD9 1512 aaPredicted RBP33.41■■■□□ 2.94
SPOP-206ENST00000504102 EIF4G3O43432 1585 aaKnown RBP33.26■■■□□ 2.91
SPOP-206ENST00000504102 AQRO60306 1485 aaKnown RBP eCLIP33.26■■■□□ 2.911e-6■■■■□ 24.4
SPOP-206ENST00000504102 PBRM1Q86U86 1689 aa33.23■■■□□ 2.91
SPOP-206ENST00000504102 VPS8Q8N3P4 1428 aa33.2■■■□□ 2.9
SPOP-206ENST00000504102 GRIN2BQ13224 1484 aa33.16■■■□□ 2.9
SPOP-206ENST00000504102 ARAP1Q96P48 1450 aa33.15■■■□□ 2.9
SPOP-206ENST00000504102 TRIM26Q12899 539 aaPredicted RBP33.15■■■□□ 2.9
SPOP-206ENST00000504102 PCGF6Q9BYE7 350 aa33.14■■■□□ 2.9
SPOP-206ENST00000504102 RANGAP1P46060 587 aaPredicted RBP33.12■■■□□ 2.89
SPOP-206ENST00000504102 ARHGAP35Q9NRY4 1499 aa33.11■■■□□ 2.89
SPOP-206ENST00000504102 ADAMTS12P58397 1594 aa33.11■■■□□ 2.89
SPOP-206ENST00000504102 FHAD1B1AJZ9 1412 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms