RNA–Protein interactions for RNA: ENST00000481785.1

COL8A2-203, Transcript of collagen type VIII alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL8A2, Length 2,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2-203ENST00000481785 NISCHQ9Y2I1 1504 aa46.66■■■■■ 5.06
COL8A2-203ENST00000481785 CCDC180Q9P1Z9 1646 aa40.39■■■■■ 4.06
COL8A2-203ENST00000481785 ZCCHC6Q5VYS8 1495 aaKnown RBP39.32■■■■□ 3.88
COL8A2-203ENST00000481785 SHROOM4Q9ULL8 1493 aa38.59■■■■□ 3.77
COL8A2-203ENST00000481785 DCAF1Q9Y4B6 1507 aa38.53■■■■□ 3.76
COL8A2-203ENST00000481785 DCAF8L2P0C7V8 631 aa38.39■■■■□ 3.74
COL8A2-203ENST00000481785 MYO15BQ96JP2 1530 aa37.81■■■■□ 3.64
COL8A2-203ENST00000481785 ABCC9O60706 1549 aa37.68■■■■□ 3.62
COL8A2-203ENST00000481785 NACADO15069 1562 aa37.45■■■■□ 3.59
COL8A2-203ENST00000481785 SUPT5HO00267 1087 aaKnown RBP37.42■■■■□ 3.58
COL8A2-203ENST00000481785 SCRIBQ14160 1630 aa37.3■■■■□ 3.56
COL8A2-203ENST00000481785 RB1CC1Q8TDY2 1594 aa36.99■■■■□ 3.51
COL8A2-203ENST00000481785 RSF1Q96T23 1441 aaPredicted RBP36.44■■■■□ 3.42
COL8A2-203ENST00000481785 UNC13AQ9UPW8 1703 aa36.4■■■■□ 3.42
COL8A2-203ENST00000481785 CECR2Q9BXF3 1484 aa36.24■■■■□ 3.39
COL8A2-203ENST00000481785 CHIC1Q5VXU3 224 aa36.13■■■■□ 3.37
COL8A2-203ENST00000481785 MROH2BQ7Z745 1585 aa36.11■■■■□ 3.37
COL8A2-203ENST00000481785 BAZ1AQ9NRL2 1556 aaPredicted RBP35.96■■■■□ 3.35
COL8A2-203ENST00000481785 BICRAQ9NZM4 1560 aa35.91■■■■□ 3.34
COL8A2-203ENST00000481785 WIZO95785 1651 aa35.88■■■■□ 3.33
COL8A2-203ENST00000481785 SMARCA4P51532 1647 aa35.76■■■■□ 3.31
COL8A2-203ENST00000481785 PABPN1Q86U42 306 aaKnown RBP eCLIP35.67■■■■□ 3.3
COL8A2-203ENST00000481785 TOP2AP11388 1531 aaKnown RBP35.46■■■■□ 3.27
COL8A2-203ENST00000481785 PEG3Q9GZU2 1588 aa35.25■■■■□ 3.23
COL8A2-203ENST00000481785 SMARCA2P51531 1590 aa35.18■■■■□ 3.22
COL8A2-203ENST00000481785 EIF4G1Q04637 1599 aaKnown RBP35.15■■■■□ 3.22
COL8A2-203ENST00000481785 CCDC88BA6NC98 1476 aa35.13■■■■□ 3.21
COL8A2-203ENST00000481785 TRIM41Q8WV44 630 aa35.1■■■■□ 3.21
COL8A2-203ENST00000481785 ATAD2BQ9ULI0 1458 aa34.98■■■■□ 3.19
COL8A2-203ENST00000481785 BAZ1BQ9UIG0 1483 aaKnown RBP34.83■■■■□ 3.17
COL8A2-203ENST00000481785 LOC105371045A0A1W2PR82 267 aa34.81■■■■□ 3.16
COL8A2-203ENST00000481785 ABCC8Q09428 1581 aa34.64■■■■□ 3.14
COL8A2-203ENST00000481785 HMGXB3Q12766 1538 aa34.56■■■■□ 3.12
COL8A2-203ENST00000481785 NCAPD3P42695 1498 aa34.55■■■■□ 3.12
COL8A2-203ENST00000481785 FAM9AQ8IZU1 332 aaPredicted RBP34.54■■■■□ 3.12
COL8A2-203ENST00000481785 WRNQ14191 1432 aaPredicted RBP eCLIP34.27■■■■□ 3.08
COL8A2-203ENST00000481785 SYNJ1O43426 1573 aa34.16■■■■□ 3.06
COL8A2-203ENST00000481785 CC2D2AQ9P2K1 1620 aa34.11■■■■□ 3.05
COL8A2-203ENST00000481785 SOGA1O94964 1423 aa34.09■■■■□ 3.05
COL8A2-203ENST00000481785 EEA1Q15075 1411 aa34.09■■■■□ 3.05
COL8A2-203ENST00000481785 EHMT2Q96KQ7 1210 aa34.06■■■■□ 3.04
COL8A2-203ENST00000481785 CFTRP13569 1480 aa33.97■■■■□ 3.03
COL8A2-203ENST00000481785 RUSC2Q8N2Y8 1516 aa33.95■■■■□ 3.03
COL8A2-203ENST00000481785 TOP2BQ02880 1626 aa33.94■■■■□ 3.02
COL8A2-203ENST00000481785 PRDM2Q13029 1718 aa33.93■■■■□ 3.02
COL8A2-203ENST00000481785 BIVM-ERCC5R4GMW8 1640 aa33.91■■■■□ 3.02
COL8A2-203ENST00000481785 CSRNP3Q8WYN3 585 aa33.87■■■■□ 3.01
COL8A2-203ENST00000481785 PCGF6Q9BYE7 350 aa33.87■■■■□ 3.01
COL8A2-203ENST00000481785 CUX1P39880 1505 aa33.72■■■□□ 2.99
COL8A2-203ENST00000481785 CADPSQ9ULU8 1353 aa33.72■■■□□ 2.99
COL8A2-203ENST00000481785 TNIKQ9UKE5 1360 aa33.69■■■□□ 2.98
COL8A2-203ENST00000481785 TRIM26Q12899 539 aaPredicted RBP33.69■■■□□ 2.98
COL8A2-203ENST00000481785 GOLGA3Q08378 1498 aa33.68■■■□□ 2.98
COL8A2-203ENST00000481785 KIF21BO75037 1637 aa33.66■■■□□ 2.98
COL8A2-203ENST00000481785 CEP164Q9UPV0 1460 aa33.61■■■□□ 2.97
COL8A2-203ENST00000481785 CEP162Q5TB80 1403 aa33.58■■■□□ 2.97
COL8A2-203ENST00000481785 UBTFP17480 764 aaKnown RBP33.52■■■□□ 2.96
COL8A2-203ENST00000481785 HRCP23327 699 aa33.4■■■□□ 2.94
COL8A2-203ENST00000481785 FANCD2Q9BXW9 1451 aa33.38■■■□□ 2.93
COL8A2-203ENST00000481785 RAPGEF2Q9Y4G8 1499 aa33.36■■■□□ 2.93
COL8A2-203ENST00000481785 KIF27Q86VH2 1401 aa33.34■■■□□ 2.93
COL8A2-203ENST00000481785 ERICH3Q5RHP9 1530 aa33.3■■■□□ 2.92
COL8A2-203ENST00000481785 LAMC3Q9Y6N6 1575 aa33.29■■■□□ 2.92
COL8A2-203ENST00000481785 NESP48681 1621 aa33.29■■■□□ 2.92
COL8A2-203ENST00000481785 PRXQ9BXM0 1461 aa33.29■■■□□ 2.92
COL8A2-203ENST00000481785 FGD5Q6ZNL6 1462 aa33.24■■■□□ 2.91
COL8A2-203ENST00000481785 DNMBPQ6XZF7 1577 aa33.2■■■□□ 2.9
COL8A2-203ENST00000481785 CLIP1P30622 1438 aa33.17■■■□□ 2.9
COL8A2-203ENST00000481785 PPARGC1BQ86YN6 1023 aaKnown RBP33.16■■■□□ 2.9
COL8A2-203ENST00000481785 CUX2O14529 1486 aa33.14■■■□□ 2.9
COL8A2-203ENST00000481785 TOPBP1Q92547 1522 aa33.1■■■□□ 2.89
COL8A2-203ENST00000481785 DNAJC5BQ9UF47 199 aa33.08■■■□□ 2.89
COL8A2-203ENST00000481785 PDS5BQ9NTI5 1447 aa33■■■□□ 2.87
COL8A2-203ENST00000481785 IGF1RP08069 1367 aa32.99■■■□□ 2.87
COL8A2-203ENST00000481785 POLA1P09884 1462 aaPredicted RBP32.98■■■□□ 2.87
COL8A2-203ENST00000481785 VPS8Q8N3P4 1428 aa32.97■■■□□ 2.87
COL8A2-203ENST00000481785 URB2Q14146 1524 aaKnown RBP32.94■■■□□ 2.86
COL8A2-203ENST00000481785 ABCA10Q8WWZ4 1543 aa32.93■■■□□ 2.86
COL8A2-203ENST00000481785 KIF21AQ7Z4S6 1674 aa32.93■■■□□ 2.86
COL8A2-203ENST00000481785 RAD54L2Q9Y4B4 1467 aa32.91■■■□□ 2.86
COL8A2-203ENST00000481785 RANGAP1P46060 587 aaPredicted RBP32.84■■■□□ 2.85
COL8A2-203ENST00000481785 CARMIL1Q5VZK9 1371 aa32.84■■■□□ 2.85
COL8A2-203ENST00000481785 WDR97A6NE52 1622 aa32.83■■■□□ 2.85
COL8A2-203ENST00000481785 ARAP1Q96P48 1450 aa32.79■■■□□ 2.84
COL8A2-203ENST00000481785 TTBK1Q5TCY1 1321 aaPredicted RBP32.77■■■□□ 2.84
COL8A2-203ENST00000481785 CUL7Q14999 1698 aa32.7■■■□□ 2.83
COL8A2-203ENST00000481785 ARHGAP35Q9NRY4 1499 aa32.66■■■□□ 2.82
COL8A2-203ENST00000481785 APLP2Q06481 763 aa32.65■■■□□ 2.82
COL8A2-203ENST00000481785 ABCA5Q8WWZ7 1642 aa32.64■■■□□ 2.82
COL8A2-203ENST00000481785 ZEB1P37275 1124 aaPredicted RBP32.64■■■□□ 2.82
COL8A2-203ENST00000481785 TARBP1Q13395 1621 aaKnown RBP32.57■■■□□ 2.8
COL8A2-203ENST00000481785 MRC2Q9UBG0 1479 aa32.56■■■□□ 2.8
COL8A2-203ENST00000481785 GAPVD1Q14C86 1478 aa32.52■■■□□ 2.8
COL8A2-203ENST00000481785 TDRD9Q8NDG6 1382 aaKnown RBP32.51■■■□□ 2.8
COL8A2-203ENST00000481785 CTTNBP2Q8WZ74 1663 aa32.48■■■□□ 2.79
COL8A2-203ENST00000481785 WDR62O43379 1518 aa32.37■■■□□ 2.77
COL8A2-203ENST00000481785 PBRM1Q86U86 1689 aa32.37■■■□□ 2.77
COL8A2-203ENST00000481785 EFCAB5A4FU69 1503 aa32.34■■■□□ 2.77
COL8A2-203ENST00000481785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.32■■■□□ 2.76
COL8A2-203ENST00000481785 KANK4Q5T7N3 995 aaPredicted RBP32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms