RNA–Protein interactions for RNA: ENST00000314606.8

FARSA-201, Transcript of phenylalanyl-tRNA synthetase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARSA, Length 1,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARSA-201ENST00000314606 NISCHQ9Y2I1 1504 aa47.78■■■■■ 5.24
FARSA-201ENST00000314606 CCDC180Q9P1Z9 1646 aa41.61■■■■■ 4.25
FARSA-201ENST00000314606 ZCCHC6Q5VYS8 1495 aaKnown RBP40.11■■■■■ 4.01
FARSA-201ENST00000314606 DCAF8L2P0C7V8 631 aa39.59■■■■□ 3.93
FARSA-201ENST00000314606 DCAF1Q9Y4B6 1507 aa39.47■■■■□ 3.91
FARSA-201ENST00000314606 ABCC9O60706 1549 aa39.46■■■■□ 3.91
FARSA-201ENST00000314606 SHROOM4Q9ULL8 1493 aa39.02■■■■□ 3.84
FARSA-201ENST00000314606 MYO15BQ96JP2 1530 aa39.01■■■■□ 3.84
FARSA-201ENST00000314606 NACADO15069 1562 aa38.8■■■■□ 3.8
FARSA-201ENST00000314606 RB1CC1Q8TDY2 1594 aa38.47■■■■□ 3.75
FARSA-201ENST00000314606 SCRIBQ14160 1630 aa38.31■■■■□ 3.72
FARSA-201ENST00000314606 UNC13AQ9UPW8 1703 aa37.67■■■■□ 3.62
FARSA-201ENST00000314606 SUPT5HO00267 1087 aaKnown RBP37.57■■■■□ 3.61
FARSA-201ENST00000314606 BICRAQ9NZM4 1560 aa37.32■■■■□ 3.56
FARSA-201ENST00000314606 PABPN1Q86U42 306 aaKnown RBP eCLIP37.26■■■■□ 3.55
FARSA-201ENST00000314606 CECR2Q9BXF3 1484 aa37.15■■■■□ 3.54
FARSA-201ENST00000314606 RSF1Q96T23 1441 aaPredicted RBP37.08■■■■□ 3.53
FARSA-201ENST00000314606 MROH2BQ7Z745 1585 aa36.92■■■■□ 3.5
FARSA-201ENST00000314606 BAZ1AQ9NRL2 1556 aaPredicted RBP36.88■■■■□ 3.49
FARSA-201ENST00000314606 SMARCA4P51532 1647 aa36.71■■■■□ 3.47
FARSA-201ENST00000314606 WIZO95785 1651 aa36.61■■■■□ 3.45
FARSA-201ENST00000314606 PEG3Q9GZU2 1588 aa36.25■■■■□ 3.39
FARSA-201ENST00000314606 TOP2AP11388 1531 aaKnown RBP36.21■■■■□ 3.39
FARSA-201ENST00000314606 EIF4G1Q04637 1599 aaKnown RBP36.2■■■■□ 3.38
FARSA-201ENST00000314606 ATAD2BQ9ULI0 1458 aa36.14■■■■□ 3.38
FARSA-201ENST00000314606 SMARCA2P51531 1590 aa36.11■■■■□ 3.37
FARSA-201ENST00000314606 BAZ1BQ9UIG0 1483 aaKnown RBP35.94■■■■□ 3.34
FARSA-201ENST00000314606 CHIC1Q5VXU3 224 aa35.93■■■■□ 3.34
FARSA-201ENST00000314606 CCDC88BA6NC98 1476 aa35.88■■■■□ 3.33
FARSA-201ENST00000314606 NCAPD3P42695 1498 aa35.84■■■■□ 3.33
FARSA-201ENST00000314606 HMGXB3Q12766 1538 aa35.75■■■■□ 3.31
FARSA-201ENST00000314606 CC2D2AQ9P2K1 1620 aa35.68■■■■□ 3.3
FARSA-201ENST00000314606 TRIM41Q8WV44 630 aa35.32■■■■□ 3.25
FARSA-201ENST00000314606 ABCC8Q09428 1581 aa35.1■■■■□ 3.21
FARSA-201ENST00000314606 CFTRP13569 1480 aa35.03■■■■□ 3.2
FARSA-201ENST00000314606 CADPSQ9ULU8 1353 aa34.94■■■■□ 3.18
FARSA-201ENST00000314606 WRNQ14191 1432 aaPredicted RBP eCLIP34.9■■■■□ 3.18
FARSA-201ENST00000314606 DNAJC5BQ9UF47 199 aa34.87■■■■□ 3.17
FARSA-201ENST00000314606 PRDM2Q13029 1718 aa34.78■■■■□ 3.16
FARSA-201ENST00000314606 SYNJ1O43426 1573 aa34.73■■■■□ 3.15
FARSA-201ENST00000314606 FAM9AQ8IZU1 332 aaPredicted RBP34.69■■■■□ 3.14
FARSA-201ENST00000314606 NESP48681 1621 aa34.63■■■■□ 3.13
FARSA-201ENST00000314606 LOC105371045A0A1W2PR82 267 aa34.6■■■■□ 3.13
FARSA-201ENST00000314606 LAMC3Q9Y6N6 1575 aa34.59■■■■□ 3.13
FARSA-201ENST00000314606 TOP2BQ02880 1626 aa34.58■■■■□ 3.13
FARSA-201ENST00000314606 FANCD2Q9BXW9 1451 aa34.54■■■■□ 3.12
FARSA-201ENST00000314606 BIVM-ERCC5R4GMW8 1640 aa34.53■■■■□ 3.12
FARSA-201ENST00000314606 CUX1P39880 1505 aa34.51■■■■□ 3.12
FARSA-201ENST00000314606 SOGA1O94964 1423 aa34.47■■■■□ 3.11
FARSA-201ENST00000314606 EEA1Q15075 1411 aa34.37■■■■□ 3.09
FARSA-201ENST00000314606 PDS5BQ9NTI5 1447 aa34.37■■■■□ 3.09
FARSA-201ENST00000314606 RUSC2Q8N2Y8 1516 aa34.35■■■■□ 3.09
FARSA-201ENST00000314606 CEP164Q9UPV0 1460 aa34.31■■■■□ 3.08
FARSA-201ENST00000314606 CSRNP3Q8WYN3 585 aa34.25■■■■□ 3.07
FARSA-201ENST00000314606 EHMT2Q96KQ7 1210 aa34.21■■■■□ 3.07
FARSA-201ENST00000314606 DNMBPQ6XZF7 1577 aa34.19■■■■□ 3.06
FARSA-201ENST00000314606 KIF21AQ7Z4S6 1674 aa34.17■■■■□ 3.06
FARSA-201ENST00000314606 TOPBP1Q92547 1522 aa34.16■■■■□ 3.06
FARSA-201ENST00000314606 FGD5Q6ZNL6 1462 aa34.14■■■■□ 3.06
FARSA-201ENST00000314606 URB2Q14146 1524 aaKnown RBP34.1■■■■□ 3.05
FARSA-201ENST00000314606 KIF27Q86VH2 1401 aa34.02■■■■□ 3.04
FARSA-201ENST00000314606 POLA1P09884 1462 aaPredicted RBP33.99■■■■□ 3.03
FARSA-201ENST00000314606 CUX2O14529 1486 aa33.94■■■■□ 3.02
FARSA-201ENST00000314606 MRC2Q9UBG0 1479 aa33.91■■■■□ 3.02
FARSA-201ENST00000314606 RAD54L2Q9Y4B4 1467 aa33.9■■■■□ 3.02
FARSA-201ENST00000314606 KIF21BO75037 1637 aa33.9■■■■□ 3.02
FARSA-201ENST00000314606 GOLGA3Q08378 1498 aa33.9■■■■□ 3.02
FARSA-201ENST00000314606 ABCA10Q8WWZ4 1543 aa33.84■■■■□ 3.01
FARSA-201ENST00000314606 UBTFP17480 764 aaKnown RBP33.83■■■■□ 3.01
FARSA-201ENST00000314606 ERCC6Q03468 1493 aa33.83■■■■□ 3.01
FARSA-201ENST00000314606 TNIKQ9UKE5 1360 aa33.82■■■■□ 3
FARSA-201ENST00000314606 PRXQ9BXM0 1461 aa33.78■■■■□ 3
FARSA-201ENST00000314606 RAPGEF2Q9Y4G8 1499 aa33.76■■■□□ 2.99
FARSA-201ENST00000314606 IGF1RP08069 1367 aa33.75■■■□□ 2.99
FARSA-201ENST00000314606 WDR62O43379 1518 aa33.71■■■□□ 2.99
FARSA-201ENST00000314606 ERICH3Q5RHP9 1530 aa33.69■■■□□ 2.98
FARSA-201ENST00000314606 WDR97A6NE52 1622 aa33.67■■■□□ 2.98
FARSA-201ENST00000314606 TARBP1Q13395 1621 aaKnown RBP33.62■■■□□ 2.97
FARSA-201ENST00000314606 CEP162Q5TB80 1403 aa33.62■■■□□ 2.97
FARSA-201ENST00000314606 TDRD9Q8NDG6 1382 aaKnown RBP33.6■■■□□ 2.97
FARSA-201ENST00000314606 THOC2Q8NI27 1593 aaKnown RBP33.59■■■□□ 2.97
FARSA-201ENST00000314606 CARMIL1Q5VZK9 1371 aa33.58■■■□□ 2.97
FARSA-201ENST00000314606 ABCA5Q8WWZ7 1642 aa33.54■■■□□ 2.96
FARSA-201ENST00000314606 GAPVD1Q14C86 1478 aa33.52■■■□□ 2.96
FARSA-201ENST00000314606 IFT140Q96RY7 1462 aa33.5■■■□□ 2.95
FARSA-201ENST00000314606 CUL7Q14999 1698 aa33.41■■■□□ 2.94
FARSA-201ENST00000314606 CLIP1P30622 1438 aa33.38■■■□□ 2.93
FARSA-201ENST00000314606 AQRO60306 1485 aaKnown RBP eCLIP33.38■■■□□ 2.934e-7■■■■□ 21.2
FARSA-201ENST00000314606 ZNF608Q9ULD9 1512 aaPredicted RBP33.33■■■□□ 2.93
FARSA-201ENST00000314606 RANGAP1P46060 587 aaPredicted RBP33.3■■■□□ 2.92
FARSA-201ENST00000314606 PBRM1Q86U86 1689 aa33.27■■■□□ 2.92
FARSA-201ENST00000314606 GRIN2BQ13224 1484 aa33.26■■■□□ 2.91
FARSA-201ENST00000314606 EIF4G3O43432 1585 aaKnown RBP33.16■■■□□ 2.9
FARSA-201ENST00000314606 FHAD1B1AJZ9 1412 aa33.15■■■□□ 2.9
FARSA-201ENST00000314606 ADAMTS12P58397 1594 aa33.1■■■□□ 2.89
FARSA-201ENST00000314606 VPS8Q8N3P4 1428 aa33.06■■■□□ 2.88
FARSA-201ENST00000314606 ARHGAP35Q9NRY4 1499 aa33.04■■■□□ 2.88
FARSA-201ENST00000314606 CTTNBP2Q8WZ74 1663 aa33.03■■■□□ 2.88
FARSA-201ENST00000314606 SNAPC4Q5SXM2 1469 aa33.03■■■□□ 2.88
FARSA-201ENST00000314606 ARAP1Q96P48 1450 aa33.03■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms