RNA–Protein interactions for RNA: ENST00000444227.2

AC012313.1-204, humanhuman

TSL 1 (best) BASIC

Gene AC012313.1, Length 462 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012313.1-204ENST00000444227 NISCHQ9Y2I1 1504 aa53.47■■■■■ 6.15
AC012313.1-204ENST00000444227 ABCC9O60706 1549 aa48.05■■■■■ 5.28
AC012313.1-204ENST00000444227 CCDC180Q9P1Z9 1646 aa47.79■■■■■ 5.24
AC012313.1-204ENST00000444227 RB1CC1Q8TDY2 1594 aa45.54■■■■■ 4.88
AC012313.1-204ENST00000444227 DCAF8L2P0C7V8 631 aa45.39■■■■■ 4.86
AC012313.1-204ENST00000444227 NACADO15069 1562 aa45.22■■■■■ 4.83
AC012313.1-204ENST00000444227 DNAJC5BQ9UF47 199 aa45.18■■■■■ 4.82
AC012313.1-204ENST00000444227 PABPN1Q86U42 306 aaKnown RBP eCLIP44.87■■■■■ 4.77
AC012313.1-204ENST00000444227 UNC13AQ9UPW8 1703 aa44.6■■■■■ 4.73
AC012313.1-204ENST00000444227 MYO15BQ96JP2 1530 aa44.53■■■■■ 4.72
AC012313.1-204ENST00000444227 BICRAQ9NZM4 1560 aa44.34■■■■■ 4.69
AC012313.1-204ENST00000444227 ZCCHC6Q5VYS8 1495 aaKnown RBP44.3■■■■■ 4.68
AC012313.1-204ENST00000444227 DCAF1Q9Y4B6 1507 aa44.02■■■■■ 4.64
AC012313.1-204ENST00000444227 SCRIBQ14160 1630 aa43.8■■■■■ 4.6
AC012313.1-204ENST00000444227 SHROOM4Q9ULL8 1493 aa43.45■■■■■ 4.55
AC012313.1-204ENST00000444227 CC2D2AQ9P2K1 1620 aa43.31■■■■■ 4.52
AC012313.1-204ENST00000444227 EIF4G1Q04637 1599 aaKnown RBP43.2■■■■■ 4.51
AC012313.1-204ENST00000444227 CECR2Q9BXF3 1484 aa43.19■■■■■ 4.51
AC012313.1-204ENST00000444227 NCAPD3P42695 1498 aa41.82■■■■■ 4.29
AC012313.1-204ENST00000444227 ATAD2BQ9ULI0 1458 aa41.76■■■■■ 4.28
AC012313.1-204ENST00000444227 SMARCA4P51532 1647 aa41.69■■■■■ 4.26
AC012313.1-204ENST00000444227 SMARCA2P51531 1590 aa41.52■■■■■ 4.24
AC012313.1-204ENST00000444227 HMGXB3Q12766 1538 aa41.44■■■■■ 4.22
AC012313.1-204ENST00000444227 BAZ1AQ9NRL2 1556 aaPredicted RBP41.43■■■■■ 4.22
AC012313.1-204ENST00000444227 ERCC6Q03468 1493 aa41.38■■■■■ 4.21
AC012313.1-204ENST00000444227 BAZ1BQ9UIG0 1483 aaKnown RBP41.33■■■■■ 4.21
AC012313.1-204ENST00000444227 NESP48681 1621 aa41.33■■■■■ 4.21
AC012313.1-204ENST00000444227 MROH2BQ7Z745 1585 aa41.3■■■■■ 4.2
AC012313.1-204ENST00000444227 DNAJC5Q9H3Z4 198 aa41.26■■■■■ 4.2
AC012313.1-204ENST00000444227 PEG3Q9GZU2 1588 aa41.19■■■■■ 4.18
AC012313.1-204ENST00000444227 CUX2O14529 1486 aa41.17■■■■■ 4.18
AC012313.1-204ENST00000444227 WIZO95785 1651 aa40.8■■■■■ 4.12
AC012313.1-204ENST00000444227 LAMC3Q9Y6N6 1575 aa40.8■■■■■ 4.12
AC012313.1-204ENST00000444227 THOC2Q8NI27 1593 aaKnown RBP40.73■■■■■ 4.11
AC012313.1-204ENST00000444227 KIF21AQ7Z4S6 1674 aa40.68■■■■■ 4.1
AC012313.1-204ENST00000444227 PDS5BQ9NTI5 1447 aa40.61■■■■■ 4.09
AC012313.1-204ENST00000444227 CADPSQ9ULU8 1353 aa40.6■■■■■ 4.09
AC012313.1-204ENST00000444227 RSF1Q96T23 1441 aaPredicted RBP40.45■■■■■ 4.07
AC012313.1-204ENST00000444227 MRC2Q9UBG0 1479 aa40.29■■■■■ 4.04
AC012313.1-204ENST00000444227 TOP2AP11388 1531 aaKnown RBP40.17■■■■■ 4.02
AC012313.1-204ENST00000444227 WDR62O43379 1518 aa40.16■■■■■ 4.02
AC012313.1-204ENST00000444227 FANCD2Q9BXW9 1451 aa40.14■■■■■ 4.02
AC012313.1-204ENST00000444227 CEP164Q9UPV0 1460 aa40.13■■■■■ 4.02
AC012313.1-204ENST00000444227 CFTRP13569 1480 aa40.12■■■■■ 4.01
AC012313.1-204ENST00000444227 URB2Q14146 1524 aaKnown RBP39.86■■■■□ 3.97
AC012313.1-204ENST00000444227 CCDC88BA6NC98 1476 aa39.84■■■■□ 3.97
AC012313.1-204ENST00000444227 TRIM41Q8WV44 630 aa39.62■■■■□ 3.93
AC012313.1-204ENST00000444227 PRDM2Q13029 1718 aa39.59■■■■□ 3.93
AC012313.1-204ENST00000444227 OSCARQ8IYS5 282 aa39.45■■■■□ 3.91
AC012313.1-204ENST00000444227 ZNF608Q9ULD9 1512 aaPredicted RBP39.4■■■■□ 3.9
AC012313.1-204ENST00000444227 TOPBP1Q92547 1522 aa39.39■■■■□ 3.9
AC012313.1-204ENST00000444227 IFT140Q96RY7 1462 aa39.32■■■■□ 3.89
AC012313.1-204ENST00000444227 DNMBPQ6XZF7 1577 aa39.19■■■■□ 3.86
AC012313.1-204ENST00000444227 ABCC8Q09428 1581 aa39.16■■■■□ 3.86
AC012313.1-204ENST00000444227 AQRO60306 1485 aaKnown RBP eCLIP39.07■■■■□ 3.85
AC012313.1-204ENST00000444227 EIF4G3O43432 1585 aaKnown RBP39.07■■■■□ 3.84
AC012313.1-204ENST00000444227 TARBP1Q13395 1621 aaKnown RBP39.02■■■■□ 3.84
AC012313.1-204ENST00000444227 POLA1P09884 1462 aaPredicted RBP39■■■■□ 3.83
AC012313.1-204ENST00000444227 RAD54L2Q9Y4B4 1467 aa38.97■■■■□ 3.83
AC012313.1-204ENST00000444227 RIMBP3CA6NJZ7 1639 aa38.91■■■■□ 3.82
AC012313.1-204ENST00000444227 RIMBP3BA6NNM3 1639 aa38.91■■■■□ 3.82
AC012313.1-204ENST00000444227 RIMBP3Q9UFD9 1639 aa38.91■■■■□ 3.82
AC012313.1-204ENST00000444227 SUPT5HO00267 1087 aaKnown RBP38.89■■■■□ 3.82
AC012313.1-204ENST00000444227 TDRD9Q8NDG6 1382 aaKnown RBP38.85■■■■□ 3.81
AC012313.1-204ENST00000444227 FBLN2P98095 1184 aa38.85■■■■□ 3.81
AC012313.1-204ENST00000444227 SOGA1O94964 1423 aa38.85■■■■□ 3.81
AC012313.1-204ENST00000444227 CHD1O14646 1710 aa38.79■■■■□ 3.8
AC012313.1-204ENST00000444227 FGD5Q6ZNL6 1462 aa38.79■■■■□ 3.8
AC012313.1-204ENST00000444227 ARHGEF11O15085 1522 aa38.78■■■■□ 3.8
AC012313.1-204ENST00000444227 CUX1P39880 1505 aa38.78■■■■□ 3.8
AC012313.1-204ENST00000444227 CYB5RLQ6IPT4 315 aa38.64■■■■□ 3.78
AC012313.1-204ENST00000444227 SNAPC4Q5SXM2 1469 aa38.6■■■■□ 3.77
AC012313.1-204ENST00000444227 CHMP7Q8WUX9 453 aaPredicted RBP38.48■■■■□ 3.75
AC012313.1-204ENST00000444227 ARAP1Q96P48 1450 aa38.44■■■■□ 3.74
AC012313.1-204ENST00000444227 GRIN2BQ13224 1484 aa38.43■■■■□ 3.74
AC012313.1-204ENST00000444227 WDR97A6NE52 1622 aa38.41■■■■□ 3.74
AC012313.1-204ENST00000444227 MAGI1Q96QZ7 1491 aaPredicted RBP38.38■■■■□ 3.73
AC012313.1-204ENST00000444227 GAPVD1Q14C86 1478 aa38.35■■■■□ 3.73
AC012313.1-204ENST00000444227 CLASP1Q7Z460 1538 aa38.31■■■■□ 3.72
AC012313.1-204ENST00000444227 SYNJ2O15056 1496 aa38.29■■■■□ 3.72
AC012313.1-204ENST00000444227 ABCA10Q8WWZ4 1543 aa38.28■■■■□ 3.72
AC012313.1-204ENST00000444227 PBRM1Q86U86 1689 aa38.27■■■■□ 3.72
AC012313.1-204ENST00000444227 SYNJ1O43426 1573 aa38.25■■■■□ 3.71
AC012313.1-204ENST00000444227 ABCA5Q8WWZ7 1642 aa38.2■■■■□ 3.71
AC012313.1-204ENST00000444227 TRHP20396 242 aaPredicted RBP38.18■■■■□ 3.7
AC012313.1-204ENST00000444227 WRNQ14191 1432 aaPredicted RBP eCLIP38.14■■■■□ 3.7
AC012313.1-204ENST00000444227 TOP2BQ02880 1626 aa38.07■■■■□ 3.68
AC012313.1-204ENST00000444227 BIVM-ERCC5R4GMW8 1640 aa38.05■■■■□ 3.68
AC012313.1-204ENST00000444227 GRIN2AQ12879 1464 aa37.96■■■■□ 3.67
AC012313.1-204ENST00000444227 ADAMTS12P58397 1594 aa37.93■■■■□ 3.66
AC012313.1-204ENST00000444227 ERCC6L2Q5T890 1561 aa37.89■■■■□ 3.66
AC012313.1-204ENST00000444227 CEP170Q5SW79 1584 aa37.86■■■■□ 3.65
AC012313.1-204ENST00000444227 FHAD1B1AJZ9 1412 aa37.83■■■■□ 3.65
AC012313.1-204ENST00000444227 NUP160Q12769 1436 aa37.82■■■■□ 3.64
AC012313.1-204ENST00000444227 ERICH3Q5RHP9 1530 aa37.75■■■■□ 3.63
AC012313.1-204ENST00000444227 SHROOM2Q13796 1616 aa37.6■■■■□ 3.61
AC012313.1-204ENST00000444227 JPH4Q96JJ6 628 aa37.53■■■■□ 3.6
AC012313.1-204ENST00000444227 PRG4Q92954 1404 aaPredicted RBP37.53■■■■□ 3.6
AC012313.1-204ENST00000444227 IGF1RP08069 1367 aa37.43■■■■□ 3.58
AC012313.1-204ENST00000444227 RUSC2Q8N2Y8 1516 aa37.38■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms