RNA–Protein interactions for RNA: ENST00000503731.5

TUSC3-203, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TUSC3, Length 1,498 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-203ENST00000503731 NISCHQ9Y2I1 1504 aa50.35■■■■■ 5.65
TUSC3-203ENST00000503731 CCDC180Q9P1Z9 1646 aa44.48■■■■■ 4.71
TUSC3-203ENST00000503731 ABCC9O60706 1549 aa43.17■■■■■ 4.5
TUSC3-203ENST00000503731 ZCCHC6Q5VYS8 1495 aaKnown RBP42.04■■■■■ 4.32
TUSC3-203ENST00000503731 DCAF8L2P0C7V8 631 aa41.9■■■■■ 4.3
TUSC3-203ENST00000503731 NACADO15069 1562 aa41.74■■■■■ 4.27
TUSC3-203ENST00000503731 RB1CC1Q8TDY2 1594 aa41.66■■■■■ 4.26
TUSC3-203ENST00000503731 MYO15BQ96JP2 1530 aa41.66■■■■■ 4.26
TUSC3-203ENST00000503731 DCAF1Q9Y4B6 1507 aa41.66■■■■■ 4.26
TUSC3-203ENST00000503731 UNC13AQ9UPW8 1703 aa40.72■■■■■ 4.11
TUSC3-203ENST00000503731 SCRIBQ14160 1630 aa40.67■■■■■ 4.1
TUSC3-203ENST00000503731 PABPN1Q86U42 306 aaKnown RBP eCLIP40.45■■■■■ 4.07
TUSC3-203ENST00000503731 BICRAQ9NZM4 1560 aa40.45■■■■■ 4.07
TUSC3-203ENST00000503731 SHROOM4Q9ULL8 1493 aa40.09■■■■■ 4.01
TUSC3-203ENST00000503731 EIF4G1Q04637 1599 aaKnown RBP39.31■■■■□ 3.88
TUSC3-203ENST00000503731 DNAJC5BQ9UF47 199 aa39.29■■■■□ 3.88
TUSC3-203ENST00000503731 CECR2Q9BXF3 1484 aa39.22■■■■□ 3.87
TUSC3-203ENST00000503731 CC2D2AQ9P2K1 1620 aa39.04■■■■□ 3.84
TUSC3-203ENST00000503731 BAZ1AQ9NRL2 1556 aaPredicted RBP38.96■■■■□ 3.83
TUSC3-203ENST00000503731 SMARCA4P51532 1647 aa38.94■■■■□ 3.82
TUSC3-203ENST00000503731 MROH2BQ7Z745 1585 aa38.84■■■■□ 3.81
TUSC3-203ENST00000503731 ATAD2BQ9ULI0 1458 aa38.66■■■■□ 3.78
TUSC3-203ENST00000503731 SMARCA2P51531 1590 aa38.57■■■■□ 3.77
TUSC3-203ENST00000503731 RSF1Q96T23 1441 aaPredicted RBP38.57■■■■□ 3.77
TUSC3-203ENST00000503731 PEG3Q9GZU2 1588 aa38.56■■■■□ 3.76
TUSC3-203ENST00000503731 NCAPD3P42695 1498 aa38.56■■■■□ 3.76
TUSC3-203ENST00000503731 WIZO95785 1651 aa38.41■■■■□ 3.74
TUSC3-203ENST00000503731 HMGXB3Q12766 1538 aa38.37■■■■□ 3.73
TUSC3-203ENST00000503731 BAZ1BQ9UIG0 1483 aaKnown RBP38.32■■■■□ 3.73
TUSC3-203ENST00000503731 TOP2AP11388 1531 aaKnown RBP38.01■■■■□ 3.68
TUSC3-203ENST00000503731 SUPT5HO00267 1087 aaKnown RBP37.95■■■■□ 3.67
TUSC3-203ENST00000503731 CCDC88BA6NC98 1476 aa37.61■■■■□ 3.61
TUSC3-203ENST00000503731 NESP48681 1621 aa37.51■■■■□ 3.6
TUSC3-203ENST00000503731 CADPSQ9ULU8 1353 aa37.46■■■■□ 3.59
TUSC3-203ENST00000503731 LAMC3Q9Y6N6 1575 aa37.41■■■■□ 3.58
TUSC3-203ENST00000503731 CFTRP13569 1480 aa37.34■■■■□ 3.57
TUSC3-203ENST00000503731 PDS5BQ9NTI5 1447 aa37.16■■■■□ 3.54
TUSC3-203ENST00000503731 ERCC6Q03468 1493 aa37.11■■■■□ 3.53
TUSC3-203ENST00000503731 FANCD2Q9BXW9 1451 aa37.02■■■■□ 3.52
TUSC3-203ENST00000503731 KIF21AQ7Z4S6 1674 aa37■■■■□ 3.51
TUSC3-203ENST00000503731 PRDM2Q13029 1718 aa36.98■■■■□ 3.51
TUSC3-203ENST00000503731 CEP164Q9UPV0 1460 aa36.9■■■■□ 3.5
TUSC3-203ENST00000503731 THOC2Q8NI27 1593 aaKnown RBP36.79■■■■□ 3.48
TUSC3-203ENST00000503731 MRC2Q9UBG0 1479 aa36.76■■■■□ 3.48
TUSC3-203ENST00000503731 URB2Q14146 1524 aaKnown RBP36.64■■■■□ 3.46
TUSC3-203ENST00000503731 WDR62O43379 1518 aa36.62■■■■□ 3.45
TUSC3-203ENST00000503731 CUX2O14529 1486 aa36.55■■■■□ 3.44
TUSC3-203ENST00000503731 TOPBP1Q92547 1522 aa36.48■■■■□ 3.43
TUSC3-203ENST00000503731 ABCC8Q09428 1581 aa36.46■■■■□ 3.43
TUSC3-203ENST00000503731 DNMBPQ6XZF7 1577 aa36.45■■■■□ 3.43
TUSC3-203ENST00000503731 CUX1P39880 1505 aa36.4■■■■□ 3.42
TUSC3-203ENST00000503731 WRNQ14191 1432 aaPredicted RBP eCLIP36.32■■■■□ 3.4
TUSC3-203ENST00000503731 SYNJ1O43426 1573 aa36.21■■■■□ 3.39
TUSC3-203ENST00000503731 POLA1P09884 1462 aaPredicted RBP36.21■■■■□ 3.39
TUSC3-203ENST00000503731 FGD5Q6ZNL6 1462 aa36.19■■■■□ 3.38
TUSC3-203ENST00000503731 TOP2BQ02880 1626 aa36.17■■■■□ 3.38
TUSC3-203ENST00000503731 BIVM-ERCC5R4GMW8 1640 aa36.15■■■■□ 3.38
TUSC3-203ENST00000503731 IFT140Q96RY7 1462 aa36.11■■■■□ 3.37
TUSC3-203ENST00000503731 RAD54L2Q9Y4B4 1467 aa36.07■■■■□ 3.37
TUSC3-203ENST00000503731 SOGA1O94964 1423 aa36.07■■■■□ 3.37
TUSC3-203ENST00000503731 TARBP1Q13395 1621 aaKnown RBP36.04■■■■□ 3.36
TUSC3-203ENST00000503731 ZNF608Q9ULD9 1512 aaPredicted RBP35.96■■■■□ 3.35
TUSC3-203ENST00000503731 ABCA10Q8WWZ4 1543 aa35.85■■■■□ 3.33
TUSC3-203ENST00000503731 TDRD9Q8NDG6 1382 aaKnown RBP35.84■■■■□ 3.33
TUSC3-203ENST00000503731 WDR97A6NE52 1622 aa35.82■■■■□ 3.33
TUSC3-203ENST00000503731 AQRO60306 1485 aaKnown RBP eCLIP35.82■■■■□ 3.32
TUSC3-203ENST00000503731 TRIM41Q8WV44 630 aa35.8■■■■□ 3.32
TUSC3-203ENST00000503731 EIF4G3O43432 1585 aaKnown RBP35.78■■■■□ 3.32
TUSC3-203ENST00000503731 CHIC1Q5VXU3 224 aa35.73■■■■□ 3.31
TUSC3-203ENST00000503731 ABCA5Q8WWZ7 1642 aa35.65■■■■□ 3.3
TUSC3-203ENST00000503731 GAPVD1Q14C86 1478 aa35.65■■■■□ 3.3
TUSC3-203ENST00000503731 GRIN2BQ13224 1484 aa35.57■■■■□ 3.28
TUSC3-203ENST00000503731 KIF27Q86VH2 1401 aa35.51■■■■□ 3.27
TUSC3-203ENST00000503731 PBRM1Q86U86 1689 aa35.48■■■■□ 3.27
TUSC3-203ENST00000503731 SNAPC4Q5SXM2 1469 aa35.47■■■■□ 3.27
TUSC3-203ENST00000503731 MAGI1Q96QZ7 1491 aaPredicted RBP35.42■■■■□ 3.26
TUSC3-203ENST00000503731 ERICH3Q5RHP9 1530 aa35.41■■■■□ 3.26
TUSC3-203ENST00000503731 RUSC2Q8N2Y8 1516 aa35.41■■■■□ 3.26
TUSC3-203ENST00000503731 IGF1RP08069 1367 aa35.37■■■■□ 3.25
TUSC3-203ENST00000503731 SYNJ2O15056 1496 aa35.28■■■■□ 3.24
TUSC3-203ENST00000503731 ADAMTS12P58397 1594 aa35.27■■■■□ 3.24
TUSC3-203ENST00000503731 FBLN2P98095 1184 aa35.27■■■■□ 3.24
TUSC3-203ENST00000503731 FHAD1B1AJZ9 1412 aa35.25■■■■□ 3.23
TUSC3-203ENST00000503731 CHMP7Q8WUX9 453 aaPredicted RBP35.24■■■■□ 3.23
TUSC3-203ENST00000503731 CHD1O14646 1710 aa35.22■■■■□ 3.23
TUSC3-203ENST00000503731 OSCARQ8IYS5 282 aa35.17■■■■□ 3.22
TUSC3-203ENST00000503731 CARMIL1Q5VZK9 1371 aa35.15■■■■□ 3.22
TUSC3-203ENST00000503731 CUL7Q14999 1698 aa35.14■■■■□ 3.22
TUSC3-203ENST00000503731 GRIN2AQ12879 1464 aa35.13■■■■□ 3.21
TUSC3-203ENST00000503731 EEA1Q15075 1411 aa35.12■■■■□ 3.21
TUSC3-203ENST00000503731 FAM9AQ8IZU1 332 aaPredicted RBP35.08■■■■□ 3.21
TUSC3-203ENST00000503731 CSRNP3Q8WYN3 585 aa35.07■■■■□ 3.2
TUSC3-203ENST00000503731 PRXQ9BXM0 1461 aa34.98■■■■□ 3.19
TUSC3-203ENST00000503731 NUP160Q12769 1436 aa34.97■■■■□ 3.19
TUSC3-203ENST00000503731 RAPGEF2Q9Y4G8 1499 aa34.96■■■■□ 3.19
TUSC3-203ENST00000503731 DNAJC5Q9H3Z4 198 aa34.95■■■■□ 3.19
TUSC3-203ENST00000503731 CEP170Q5SW79 1584 aa34.93■■■■□ 3.18
TUSC3-203ENST00000503731 CLASP1Q7Z460 1538 aa34.89■■■■□ 3.18
TUSC3-203ENST00000503731 KIAA0586Q9BVV6 1533 aa34.73■■■■□ 3.15
TUSC3-203ENST00000503731 KIF21BO75037 1637 aa34.73■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms