Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
BLOC1S4Q9NUP1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
BLOC1S4Q9NUP1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.89■■■□□ 2.38
BLOC1S4Q9NUP1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
BLOC1S4Q9NUP1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
BLOC1S4Q9NUP1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.88■■■□□ 2.37
BLOC1S4Q9NUP1 SUZ12P1-203ENST00000578195 985 ntBASIC29.88■■■□□ 2.37
BLOC1S4Q9NUP1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
BLOC1S4Q9NUP1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.87■■■□□ 2.37
BLOC1S4Q9NUP1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.86■■■□□ 2.37
BLOC1S4Q9NUP1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
BLOC1S4Q9NUP1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
BLOC1S4Q9NUP1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
BLOC1S4Q9NUP1 ABCB10P1-201ENST00000614297 2181 ntBASIC29.85■■■□□ 2.37
BLOC1S4Q9NUP1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.85■■■□□ 2.37
BLOC1S4Q9NUP1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.83■■■□□ 2.37
BLOC1S4Q9NUP1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
BLOC1S4Q9NUP1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
BLOC1S4Q9NUP1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.81■■■□□ 2.36
BLOC1S4Q9NUP1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
BLOC1S4Q9NUP1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
BLOC1S4Q9NUP1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.8■■■□□ 2.36
BLOC1S4Q9NUP1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
BLOC1S4Q9NUP1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.78■■■□□ 2.36
BLOC1S4Q9NUP1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
BLOC1S4Q9NUP1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
BLOC1S4Q9NUP1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
BLOC1S4Q9NUP1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.76■■■□□ 2.35
BLOC1S4Q9NUP1 AL135925.1-201ENST00000605920 1701 ntBASIC29.76■■■□□ 2.35
BLOC1S4Q9NUP1 ST7-AS1-201ENST00000456775 1889 ntBASIC29.74■■■□□ 2.35
BLOC1S4Q9NUP1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
BLOC1S4Q9NUP1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
BLOC1S4Q9NUP1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
BLOC1S4Q9NUP1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
BLOC1S4Q9NUP1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
BLOC1S4Q9NUP1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
BLOC1S4Q9NUP1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
BLOC1S4Q9NUP1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
BLOC1S4Q9NUP1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
BLOC1S4Q9NUP1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
BLOC1S4Q9NUP1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
BLOC1S4Q9NUP1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
BLOC1S4Q9NUP1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
BLOC1S4Q9NUP1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
BLOC1S4Q9NUP1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
BLOC1S4Q9NUP1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
BLOC1S4Q9NUP1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
BLOC1S4Q9NUP1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
BLOC1S4Q9NUP1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.65■■■□□ 2.34
BLOC1S4Q9NUP1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
BLOC1S4Q9NUP1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
BLOC1S4Q9NUP1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
BLOC1S4Q9NUP1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
BLOC1S4Q9NUP1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
BLOC1S4Q9NUP1 MIR762-201ENST00000390236 83 ntBASIC29.62■■■□□ 2.33
BLOC1S4Q9NUP1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.62■■■□□ 2.33
BLOC1S4Q9NUP1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
BLOC1S4Q9NUP1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
BLOC1S4Q9NUP1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
BLOC1S4Q9NUP1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
BLOC1S4Q9NUP1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
BLOC1S4Q9NUP1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.59■■■□□ 2.33
BLOC1S4Q9NUP1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.59■■■□□ 2.33
BLOC1S4Q9NUP1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.59■■■□□ 2.33
BLOC1S4Q9NUP1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
BLOC1S4Q9NUP1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.58■■■□□ 2.33
BLOC1S4Q9NUP1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
BLOC1S4Q9NUP1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.58■■■□□ 2.33
BLOC1S4Q9NUP1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
BLOC1S4Q9NUP1 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.57■■■□□ 2.32
BLOC1S4Q9NUP1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
BLOC1S4Q9NUP1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
BLOC1S4Q9NUP1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
BLOC1S4Q9NUP1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
BLOC1S4Q9NUP1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC29.55■■■□□ 2.32
BLOC1S4Q9NUP1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
BLOC1S4Q9NUP1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.55■■■□□ 2.32
BLOC1S4Q9NUP1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.55■■■□□ 2.32
BLOC1S4Q9NUP1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
BLOC1S4Q9NUP1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
BLOC1S4Q9NUP1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
BLOC1S4Q9NUP1 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.54■■■□□ 2.32
BLOC1S4Q9NUP1 AC010864.1-201ENST00000609407 1511 ntBASIC29.54■■■□□ 2.32
BLOC1S4Q9NUP1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
BLOC1S4Q9NUP1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
BLOC1S4Q9NUP1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
BLOC1S4Q9NUP1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
BLOC1S4Q9NUP1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
BLOC1S4Q9NUP1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
BLOC1S4Q9NUP1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.52■■■□□ 2.32
BLOC1S4Q9NUP1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
BLOC1S4Q9NUP1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
BLOC1S4Q9NUP1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
BLOC1S4Q9NUP1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
BLOC1S4Q9NUP1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.51■■■□□ 2.31
BLOC1S4Q9NUP1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
BLOC1S4Q9NUP1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
BLOC1S4Q9NUP1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
BLOC1S4Q9NUP1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.5■■■□□ 2.31
BLOC1S4Q9NUP1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms