Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
BLOC1S4Q9NUP1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
BLOC1S4Q9NUP1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.89■■■□□ 2.38
BLOC1S4Q9NUP1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
BLOC1S4Q9NUP1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
BLOC1S4Q9NUP1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.88■■■□□ 2.37
BLOC1S4Q9NUP1 SUZ12P1-203ENST00000578195 985 ntBASIC29.88■■■□□ 2.37
BLOC1S4Q9NUP1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
BLOC1S4Q9NUP1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.87■■■□□ 2.37
BLOC1S4Q9NUP1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.86■■■□□ 2.37
BLOC1S4Q9NUP1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
BLOC1S4Q9NUP1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
BLOC1S4Q9NUP1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
BLOC1S4Q9NUP1 ABCB10P1-201ENST00000614297 2181 ntBASIC29.85■■■□□ 2.37
BLOC1S4Q9NUP1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.85■■■□□ 2.37
BLOC1S4Q9NUP1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.83■■■□□ 2.37
BLOC1S4Q9NUP1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
BLOC1S4Q9NUP1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
BLOC1S4Q9NUP1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.81■■■□□ 2.36
BLOC1S4Q9NUP1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
BLOC1S4Q9NUP1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
BLOC1S4Q9NUP1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.8■■■□□ 2.36
BLOC1S4Q9NUP1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
BLOC1S4Q9NUP1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.78■■■□□ 2.36
BLOC1S4Q9NUP1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
BLOC1S4Q9NUP1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
BLOC1S4Q9NUP1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
BLOC1S4Q9NUP1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.76■■■□□ 2.35
BLOC1S4Q9NUP1 AL135925.1-201ENST00000605920 1701 ntBASIC29.76■■■□□ 2.35
BLOC1S4Q9NUP1 ST7-AS1-201ENST00000456775 1889 ntBASIC29.74■■■□□ 2.35
BLOC1S4Q9NUP1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
BLOC1S4Q9NUP1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
BLOC1S4Q9NUP1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
BLOC1S4Q9NUP1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
BLOC1S4Q9NUP1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
BLOC1S4Q9NUP1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
BLOC1S4Q9NUP1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
BLOC1S4Q9NUP1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
BLOC1S4Q9NUP1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
BLOC1S4Q9NUP1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
BLOC1S4Q9NUP1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
BLOC1S4Q9NUP1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
BLOC1S4Q9NUP1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
BLOC1S4Q9NUP1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
BLOC1S4Q9NUP1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
BLOC1S4Q9NUP1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
BLOC1S4Q9NUP1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
BLOC1S4Q9NUP1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
BLOC1S4Q9NUP1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.65■■■□□ 2.34
BLOC1S4Q9NUP1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
BLOC1S4Q9NUP1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
BLOC1S4Q9NUP1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
BLOC1S4Q9NUP1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
BLOC1S4Q9NUP1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
BLOC1S4Q9NUP1 MIR762-201ENST00000390236 83 ntBASIC29.62■■■□□ 2.33
BLOC1S4Q9NUP1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.62■■■□□ 2.33
BLOC1S4Q9NUP1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
BLOC1S4Q9NUP1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
BLOC1S4Q9NUP1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
BLOC1S4Q9NUP1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
BLOC1S4Q9NUP1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
BLOC1S4Q9NUP1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.59■■■□□ 2.33
BLOC1S4Q9NUP1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.59■■■□□ 2.33
BLOC1S4Q9NUP1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.59■■■□□ 2.33
BLOC1S4Q9NUP1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
BLOC1S4Q9NUP1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.58■■■□□ 2.33
BLOC1S4Q9NUP1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
BLOC1S4Q9NUP1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.58■■■□□ 2.33
BLOC1S4Q9NUP1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
BLOC1S4Q9NUP1 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.57■■■□□ 2.32
BLOC1S4Q9NUP1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
BLOC1S4Q9NUP1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
BLOC1S4Q9NUP1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
BLOC1S4Q9NUP1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
BLOC1S4Q9NUP1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC29.55■■■□□ 2.32
BLOC1S4Q9NUP1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
BLOC1S4Q9NUP1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.55■■■□□ 2.32
BLOC1S4Q9NUP1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.55■■■□□ 2.32
BLOC1S4Q9NUP1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
BLOC1S4Q9NUP1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
BLOC1S4Q9NUP1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
BLOC1S4Q9NUP1 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.54■■■□□ 2.32
BLOC1S4Q9NUP1 AC010864.1-201ENST00000609407 1511 ntBASIC29.54■■■□□ 2.32
BLOC1S4Q9NUP1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
BLOC1S4Q9NUP1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
BLOC1S4Q9NUP1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
BLOC1S4Q9NUP1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
BLOC1S4Q9NUP1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
BLOC1S4Q9NUP1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
BLOC1S4Q9NUP1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.52■■■□□ 2.32
BLOC1S4Q9NUP1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
BLOC1S4Q9NUP1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
BLOC1S4Q9NUP1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
BLOC1S4Q9NUP1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
BLOC1S4Q9NUP1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.51■■■□□ 2.31
BLOC1S4Q9NUP1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
BLOC1S4Q9NUP1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
BLOC1S4Q9NUP1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
BLOC1S4Q9NUP1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.5■■■□□ 2.31
BLOC1S4Q9NUP1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms