Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.15■■■□□ 2.1
ATXN3LQ9H3M9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ATXN3LQ9H3M9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ATXN3LQ9H3M9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.14■■■□□ 2.1
ATXN3LQ9H3M9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.14■■■□□ 2.1
ATXN3LQ9H3M9 ZNRF2P2-203ENST00000454624 420 ntBASIC28.13■■■□□ 2.09
ATXN3LQ9H3M9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ATXN3LQ9H3M9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ATXN3LQ9H3M9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
ATXN3LQ9H3M9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ATXN3LQ9H3M9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.1■■■□□ 2.09
ATXN3LQ9H3M9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ATXN3LQ9H3M9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.09■■■□□ 2.09
ATXN3LQ9H3M9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.08■■■□□ 2.09
ATXN3LQ9H3M9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.07■■■□□ 2.08
ATXN3LQ9H3M9 DUX4L29-201ENST00000425409 679 ntBASIC28.07■■■□□ 2.08
ATXN3LQ9H3M9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ATXN3LQ9H3M9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.06■■■□□ 2.08
ATXN3LQ9H3M9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ATXN3LQ9H3M9 AC120057.4-201ENST00000624722 1615 ntBASIC28.04■■■□□ 2.08
ATXN3LQ9H3M9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ATXN3LQ9H3M9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ATXN3LQ9H3M9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.03■■■□□ 2.08
ATXN3LQ9H3M9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ATXN3LQ9H3M9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ATXN3LQ9H3M9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ATXN3LQ9H3M9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
ATXN3LQ9H3M9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
ATXN3LQ9H3M9 AC108673.1-201ENST00000510422 1159 ntBASIC28■■■□□ 2.07
ATXN3LQ9H3M9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
ATXN3LQ9H3M9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
ATXN3LQ9H3M9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.99■■■□□ 2.07
ATXN3LQ9H3M9 HLA-V-202ENST00000446817 847 ntBASIC27.99■■■□□ 2.07
ATXN3LQ9H3M9 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
ATXN3LQ9H3M9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.99■■■□□ 2.07
ATXN3LQ9H3M9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
ATXN3LQ9H3M9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
ATXN3LQ9H3M9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
ATXN3LQ9H3M9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
ATXN3LQ9H3M9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.98■■■□□ 2.07
ATXN3LQ9H3M9 AC021231.2-201ENST00000594613 730 ntBASIC27.98■■■□□ 2.07
ATXN3LQ9H3M9 MIR6090-201ENST00000622481 60 ntBASIC27.98■■■□□ 2.07
ATXN3LQ9H3M9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ATXN3LQ9H3M9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
ATXN3LQ9H3M9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.97■■■□□ 2.07
ATXN3LQ9H3M9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ATXN3LQ9H3M9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
ATXN3LQ9H3M9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ATXN3LQ9H3M9 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
ATXN3LQ9H3M9 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ATXN3LQ9H3M9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
ATXN3LQ9H3M9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.95■■■□□ 2.06
ATXN3LQ9H3M9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
ATXN3LQ9H3M9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
ATXN3LQ9H3M9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.94■■■□□ 2.06
ATXN3LQ9H3M9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
ATXN3LQ9H3M9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
ATXN3LQ9H3M9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
ATXN3LQ9H3M9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.92■■■□□ 2.06
ATXN3LQ9H3M9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.92■■■□□ 2.06
ATXN3LQ9H3M9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
ATXN3LQ9H3M9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
ATXN3LQ9H3M9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.9■■■□□ 2.06
ATXN3LQ9H3M9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
ATXN3LQ9H3M9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
ATXN3LQ9H3M9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
ATXN3LQ9H3M9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.06
ATXN3LQ9H3M9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
ATXN3LQ9H3M9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.88■■■□□ 2.05
ATXN3LQ9H3M9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.88■■■□□ 2.05
ATXN3LQ9H3M9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
ATXN3LQ9H3M9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
ATXN3LQ9H3M9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
ATXN3LQ9H3M9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
ATXN3LQ9H3M9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
ATXN3LQ9H3M9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
ATXN3LQ9H3M9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
ATXN3LQ9H3M9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
ATXN3LQ9H3M9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
ATXN3LQ9H3M9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.83■■■□□ 2.05
ATXN3LQ9H3M9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
ATXN3LQ9H3M9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
ATXN3LQ9H3M9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
ATXN3LQ9H3M9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
ATXN3LQ9H3M9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ATXN3LQ9H3M9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ATXN3LQ9H3M9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.79■■■□□ 2.04
ATXN3LQ9H3M9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.78■■■□□ 2.04
ATXN3LQ9H3M9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
ATXN3LQ9H3M9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.78■■■□□ 2.04
ATXN3LQ9H3M9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.78■■■□□ 2.04
ATXN3LQ9H3M9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.77■■■□□ 2.04
ATXN3LQ9H3M9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ATXN3LQ9H3M9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.04
ATXN3LQ9H3M9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
ATXN3LQ9H3M9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.76■■■□□ 2.03
ATXN3LQ9H3M9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
ATXN3LQ9H3M9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ATXN3LQ9H3M9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ATXN3LQ9H3M9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms