Protein–RNA interactions for Protein: Q8WU76

SCFD2, Sec1 family domain-containing protein 2, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2Q8WU76 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.39■■■□□ 2.46
SCFD2Q8WU76 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
SCFD2Q8WU76 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SCFD2Q8WU76 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.37■■■□□ 2.45
SCFD2Q8WU76 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SCFD2Q8WU76 DUX4L29-201ENST00000425409 679 ntBASIC30.36■■■□□ 2.45
SCFD2Q8WU76 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SCFD2Q8WU76 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SCFD2Q8WU76 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SCFD2Q8WU76 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.33■■■□□ 2.45
SCFD2Q8WU76 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SCFD2Q8WU76 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SCFD2Q8WU76 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SCFD2Q8WU76 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.31■■■□□ 2.44
SCFD2Q8WU76 AC108673.1-201ENST00000510422 1159 ntBASIC30.3■■■□□ 2.44
SCFD2Q8WU76 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SCFD2Q8WU76 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SCFD2Q8WU76 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.29■■■□□ 2.44
SCFD2Q8WU76 HLA-V-202ENST00000446817 847 ntBASIC30.28■■■□□ 2.44
SCFD2Q8WU76 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SCFD2Q8WU76 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
SCFD2Q8WU76 AC120057.4-201ENST00000624722 1615 ntBASIC30.27■■■□□ 2.44
SCFD2Q8WU76 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
SCFD2Q8WU76 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SCFD2Q8WU76 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SCFD2Q8WU76 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SCFD2Q8WU76 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.26■■■□□ 2.43
SCFD2Q8WU76 AC021231.2-201ENST00000594613 730 ntBASIC30.26■■■□□ 2.43
SCFD2Q8WU76 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SCFD2Q8WU76 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
SCFD2Q8WU76 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SCFD2Q8WU76 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.25■■■□□ 2.43
SCFD2Q8WU76 MIR6090-201ENST00000622481 60 ntBASIC30.25■■■□□ 2.43
SCFD2Q8WU76 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.25■■■□□ 2.43
SCFD2Q8WU76 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
SCFD2Q8WU76 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SCFD2Q8WU76 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SCFD2Q8WU76 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SCFD2Q8WU76 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.22■■■□□ 2.43
SCFD2Q8WU76 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.22■■■□□ 2.43
SCFD2Q8WU76 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.21■■■□□ 2.43
SCFD2Q8WU76 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SCFD2Q8WU76 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.21■■■□□ 2.43
SCFD2Q8WU76 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SCFD2Q8WU76 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SCFD2Q8WU76 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
SCFD2Q8WU76 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SCFD2Q8WU76 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.18■■■□□ 2.42
SCFD2Q8WU76 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
SCFD2Q8WU76 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.18■■■□□ 2.42
SCFD2Q8WU76 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
SCFD2Q8WU76 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
SCFD2Q8WU76 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
SCFD2Q8WU76 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
SCFD2Q8WU76 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
SCFD2Q8WU76 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SCFD2Q8WU76 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SCFD2Q8WU76 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.16■■■□□ 2.42
SCFD2Q8WU76 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
SCFD2Q8WU76 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.16■■■□□ 2.42
SCFD2Q8WU76 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.16■■■□□ 2.42
SCFD2Q8WU76 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.16■■■□□ 2.42
SCFD2Q8WU76 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.16■■■□□ 2.42
SCFD2Q8WU76 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SCFD2Q8WU76 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SCFD2Q8WU76 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SCFD2Q8WU76 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.14■■■□□ 2.41
SCFD2Q8WU76 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.13■■■□□ 2.41
SCFD2Q8WU76 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
SCFD2Q8WU76 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.11■■■□□ 2.41
SCFD2Q8WU76 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.11■■■□□ 2.41
SCFD2Q8WU76 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
SCFD2Q8WU76 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SCFD2Q8WU76 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.09■■■□□ 2.41
SCFD2Q8WU76 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
SCFD2Q8WU76 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
SCFD2Q8WU76 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SCFD2Q8WU76 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SCFD2Q8WU76 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SCFD2Q8WU76 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
SCFD2Q8WU76 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SCFD2Q8WU76 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.05■■■□□ 2.4
SCFD2Q8WU76 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
SCFD2Q8WU76 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.04■■■□□ 2.4
SCFD2Q8WU76 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SCFD2Q8WU76 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.04■■■□□ 2.4
SCFD2Q8WU76 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.03■■■□□ 2.4
SCFD2Q8WU76 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.03■■■□□ 2.4
SCFD2Q8WU76 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
SCFD2Q8WU76 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SCFD2Q8WU76 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30■■■□□ 2.39
SCFD2Q8WU76 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SCFD2Q8WU76 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SCFD2Q8WU76 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SCFD2Q8WU76 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.98■■■□□ 2.39
SCFD2Q8WU76 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
SCFD2Q8WU76 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.97■■■□□ 2.39
SCFD2Q8WU76 LINC01971-201ENST00000617888 1048 ntBASIC29.97■■■□□ 2.39
SCFD2Q8WU76 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
SCFD2Q8WU76 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms