Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.17■■□□□ 1.94
PGBD3Q8N328 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PGBD3Q8N328 AC021231.2-201ENST00000594613 730 ntBASIC27.16■■□□□ 1.94
PGBD3Q8N328 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.15■■□□□ 1.94
PGBD3Q8N328 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
PGBD3Q8N328 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
PGBD3Q8N328 AC108673.1-201ENST00000510422 1159 ntBASIC27.13■■□□□ 1.93
PGBD3Q8N328 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
PGBD3Q8N328 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.13■■□□□ 1.93
PGBD3Q8N328 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
PGBD3Q8N328 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PGBD3Q8N328 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.11■■□□□ 1.93
PGBD3Q8N328 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PGBD3Q8N328 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PGBD3Q8N328 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.09■■□□□ 1.93
PGBD3Q8N328 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.09■■□□□ 1.93
PGBD3Q8N328 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PGBD3Q8N328 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PGBD3Q8N328 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PGBD3Q8N328 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PGBD3Q8N328 MIR6090-201ENST00000622481 60 ntBASIC27.06■■□□□ 1.92
PGBD3Q8N328 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PGBD3Q8N328 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PGBD3Q8N328 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PGBD3Q8N328 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.05■■□□□ 1.92
PGBD3Q8N328 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PGBD3Q8N328 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.04■■□□□ 1.92
PGBD3Q8N328 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.04■■□□□ 1.92
PGBD3Q8N328 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.04■■□□□ 1.92
PGBD3Q8N328 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PGBD3Q8N328 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PGBD3Q8N328 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PGBD3Q8N328 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PGBD3Q8N328 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PGBD3Q8N328 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PGBD3Q8N328 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27■■□□□ 1.91
PGBD3Q8N328 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
PGBD3Q8N328 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.99■■□□□ 1.91
PGBD3Q8N328 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.99■■□□□ 1.91
PGBD3Q8N328 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.99■■□□□ 1.91
PGBD3Q8N328 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PGBD3Q8N328 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PGBD3Q8N328 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
PGBD3Q8N328 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.99■■□□□ 1.91
PGBD3Q8N328 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PGBD3Q8N328 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PGBD3Q8N328 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PGBD3Q8N328 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.97■■□□□ 1.91
PGBD3Q8N328 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
PGBD3Q8N328 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
PGBD3Q8N328 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.95■■□□□ 1.9
PGBD3Q8N328 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.95■■□□□ 1.9
PGBD3Q8N328 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.94■■□□□ 1.9
PGBD3Q8N328 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
PGBD3Q8N328 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.94■■□□□ 1.9
PGBD3Q8N328 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PGBD3Q8N328 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.93■■□□□ 1.9
PGBD3Q8N328 MIR639-201ENST00000384974 98 ntBASIC26.92■■□□□ 1.9
PGBD3Q8N328 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.91■■□□□ 1.9
PGBD3Q8N328 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
PGBD3Q8N328 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PGBD3Q8N328 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
PGBD3Q8N328 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PGBD3Q8N328 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PGBD3Q8N328 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.9■■□□□ 1.9
PGBD3Q8N328 MIR4449-201ENST00000578365 66 ntBASIC26.9■■□□□ 1.9
PGBD3Q8N328 AC016575.1-201ENST00000607026 382 ntBASIC26.9■■□□□ 1.9
PGBD3Q8N328 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.9■■□□□ 1.9
PGBD3Q8N328 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PGBD3Q8N328 MIR3648-2-201ENST00000581792 180 ntBASIC26.88■■□□□ 1.89
PGBD3Q8N328 MIR3648-1-201ENST00000615959 180 ntBASIC26.88■■□□□ 1.89
PGBD3Q8N328 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PGBD3Q8N328 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PGBD3Q8N328 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.87■■□□□ 1.89
PGBD3Q8N328 DUX4L11-201ENST00000611504 1267 ntBASIC26.87■■□□□ 1.89
PGBD3Q8N328 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PGBD3Q8N328 DUX4L12-201ENST00000614593 1267 ntBASIC26.87■■□□□ 1.89
PGBD3Q8N328 DUX4L14-201ENST00000621227 1267 ntBASIC26.87■■□□□ 1.89
PGBD3Q8N328 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.86■■□□□ 1.89
PGBD3Q8N328 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PGBD3Q8N328 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.85■■□□□ 1.89
PGBD3Q8N328 LINC01971-201ENST00000617888 1048 ntBASIC26.85■■□□□ 1.89
PGBD3Q8N328 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PGBD3Q8N328 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PGBD3Q8N328 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.83■■□□□ 1.89
PGBD3Q8N328 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.83■■□□□ 1.89
PGBD3Q8N328 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PGBD3Q8N328 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PGBD3Q8N328 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
PGBD3Q8N328 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PGBD3Q8N328 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.81■■□□□ 1.88
PGBD3Q8N328 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.81■■□□□ 1.88
PGBD3Q8N328 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.8■■□□□ 1.88
PGBD3Q8N328 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
PGBD3Q8N328 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PGBD3Q8N328 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.8■■□□□ 1.88
PGBD3Q8N328 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.8■■□□□ 1.88
PGBD3Q8N328 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
PGBD3Q8N328 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PGBD3Q8N328 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms