Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CCSMST1Q4G0I0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCSMST1Q4G0I0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.02■■□□□ 1.76
CCSMST1Q4G0I0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCSMST1Q4G0I0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.01■■□□□ 1.75
CCSMST1Q4G0I0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCSMST1Q4G0I0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCSMST1Q4G0I0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CCSMST1Q4G0I0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCSMST1Q4G0I0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CCSMST1Q4G0I0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.99■■□□□ 1.75
CCSMST1Q4G0I0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.98■■□□□ 1.75
CCSMST1Q4G0I0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CCSMST1Q4G0I0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CCSMST1Q4G0I0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.98■■□□□ 1.75
CCSMST1Q4G0I0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCSMST1Q4G0I0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CCSMST1Q4G0I0 MIR762-201ENST00000390236 83 ntBASIC25.96■■□□□ 1.75
CCSMST1Q4G0I0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CCSMST1Q4G0I0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CCSMST1Q4G0I0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CCSMST1Q4G0I0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCSMST1Q4G0I0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CCSMST1Q4G0I0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
CCSMST1Q4G0I0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CCSMST1Q4G0I0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.93■■□□□ 1.74
CCSMST1Q4G0I0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCSMST1Q4G0I0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCSMST1Q4G0I0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CCSMST1Q4G0I0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CCSMST1Q4G0I0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
CCSMST1Q4G0I0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.92■■□□□ 1.74
CCSMST1Q4G0I0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCSMST1Q4G0I0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCSMST1Q4G0I0 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.9■■□□□ 1.74
CCSMST1Q4G0I0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCSMST1Q4G0I0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCSMST1Q4G0I0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCSMST1Q4G0I0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CCSMST1Q4G0I0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCSMST1Q4G0I0 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.88■■□□□ 1.73
CCSMST1Q4G0I0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
CCSMST1Q4G0I0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCSMST1Q4G0I0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
CCSMST1Q4G0I0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
CCSMST1Q4G0I0 ABCB10P1-201ENST00000614297 2181 ntBASIC25.86■■□□□ 1.73
CCSMST1Q4G0I0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCSMST1Q4G0I0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.85■■□□□ 1.73
CCSMST1Q4G0I0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCSMST1Q4G0I0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CCSMST1Q4G0I0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.84■■□□□ 1.73
CCSMST1Q4G0I0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCSMST1Q4G0I0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CCSMST1Q4G0I0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.84■■□□□ 1.73
CCSMST1Q4G0I0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
CCSMST1Q4G0I0 AL135925.1-201ENST00000605920 1701 ntBASIC25.83■■□□□ 1.73
CCSMST1Q4G0I0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
CCSMST1Q4G0I0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCSMST1Q4G0I0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCSMST1Q4G0I0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.81■■□□□ 1.72
CCSMST1Q4G0I0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCSMST1Q4G0I0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.81■■□□□ 1.72
CCSMST1Q4G0I0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCSMST1Q4G0I0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.8■■□□□ 1.72
CCSMST1Q4G0I0 AC005559.1-201ENST00000589661 871 ntBASIC25.8■■□□□ 1.72
CCSMST1Q4G0I0 DUX4L28-201ENST00000623687 678 ntBASIC25.79■■□□□ 1.72
CCSMST1Q4G0I0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.79■■□□□ 1.72
CCSMST1Q4G0I0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCSMST1Q4G0I0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CCSMST1Q4G0I0 ST7-AS1-201ENST00000456775 1889 ntBASIC25.78■■□□□ 1.72
CCSMST1Q4G0I0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
CCSMST1Q4G0I0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.77■■□□□ 1.72
CCSMST1Q4G0I0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.77■■□□□ 1.72
CCSMST1Q4G0I0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
CCSMST1Q4G0I0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
CCSMST1Q4G0I0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CCSMST1Q4G0I0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.75■■□□□ 1.71
CCSMST1Q4G0I0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCSMST1Q4G0I0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CCSMST1Q4G0I0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCSMST1Q4G0I0 AL162393.1-201ENST00000437852 946 ntBASIC25.74■■□□□ 1.71
CCSMST1Q4G0I0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.73■■□□□ 1.71
CCSMST1Q4G0I0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.73■■□□□ 1.71
CCSMST1Q4G0I0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CCSMST1Q4G0I0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CCSMST1Q4G0I0 AP006261.1-201ENST00000584783 668 ntBASIC25.72■■□□□ 1.71
CCSMST1Q4G0I0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCSMST1Q4G0I0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
CCSMST1Q4G0I0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.71■■□□□ 1.71
CCSMST1Q4G0I0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCSMST1Q4G0I0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CCSMST1Q4G0I0 AC010864.1-201ENST00000609407 1511 ntBASIC25.7■■□□□ 1.7
CCSMST1Q4G0I0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CCSMST1Q4G0I0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CCSMST1Q4G0I0 MIR3665-201ENST00000578708 105 ntBASIC25.69■■□□□ 1.7
CCSMST1Q4G0I0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.69■■□□□ 1.7
CCSMST1Q4G0I0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.68■■□□□ 1.7
CCSMST1Q4G0I0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CCSMST1Q4G0I0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCSMST1Q4G0I0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms