Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBE2D3P61077 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2D3P61077 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2D3P61077 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
UBE2D3P61077 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2D3P61077 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2D3P61077 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2D3P61077 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2D3P61077 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2D3P61077 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2D3P61077 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2D3P61077 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.79■□□□□ 0.6
UBE2D3P61077 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.78■□□□□ 0.6
UBE2D3P61077 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2D3P61077 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2D3P61077 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.77■□□□□ 0.6
UBE2D3P61077 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2D3P61077 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2D3P61077 ST7-AS1-201ENST00000456775 1889 ntBASIC18.77■□□□□ 0.6
UBE2D3P61077 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.76■□□□□ 0.59
UBE2D3P61077 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2D3P61077 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.75■□□□□ 0.59
UBE2D3P61077 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2D3P61077 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.75■□□□□ 0.59
UBE2D3P61077 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2D3P61077 AC135731.1-201ENST00000569415 2548 ntBASIC18.74■□□□□ 0.59
UBE2D3P61077 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2D3P61077 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2D3P61077 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.73■□□□□ 0.59
UBE2D3P61077 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE2D3P61077 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBE2D3P61077 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2D3P61077 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2D3P61077 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2D3P61077 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2D3P61077 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2D3P61077 WASH5P-204ENST00000632292 975 ntBASIC18.71■□□□□ 0.59
UBE2D3P61077 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2D3P61077 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
UBE2D3P61077 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2D3P61077 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UBE2D3P61077 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.7■□□□□ 0.58
UBE2D3P61077 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE2D3P61077 AL135925.1-201ENST00000605920 1701 ntBASIC18.69■□□□□ 0.58
UBE2D3P61077 AL133380.1-201ENST00000506013 324 ntBASIC18.69■□□□□ 0.58
UBE2D3P61077 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2D3P61077 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2D3P61077 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2D3P61077 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2D3P61077 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2D3P61077 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2D3P61077 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2D3P61077 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2D3P61077 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2D3P61077 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.64■□□□□ 0.58
UBE2D3P61077 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
UBE2D3P61077 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.64■□□□□ 0.57
UBE2D3P61077 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2D3P61077 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2D3P61077 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2D3P61077 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2D3P61077 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2D3P61077 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2D3P61077 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UBE2D3P61077 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2D3P61077 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
UBE2D3P61077 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.61■□□□□ 0.57
UBE2D3P61077 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2D3P61077 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2D3P61077 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.61■□□□□ 0.57
UBE2D3P61077 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2D3P61077 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.61■□□□□ 0.57
UBE2D3P61077 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
UBE2D3P61077 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
UBE2D3P61077 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2D3P61077 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
UBE2D3P61077 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
UBE2D3P61077 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2D3P61077 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE2D3P61077 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE2D3P61077 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE2D3P61077 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
UBE2D3P61077 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE2D3P61077 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE2D3P61077 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE2D3P61077 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE2D3P61077 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2D3P61077 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.57■□□□□ 0.56
UBE2D3P61077 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.57■□□□□ 0.56
UBE2D3P61077 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.57■□□□□ 0.56
UBE2D3P61077 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2D3P61077 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2D3P61077 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2D3P61077 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2D3P61077 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.56■□□□□ 0.56
UBE2D3P61077 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2D3P61077 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2D3P61077 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
UBE2D3P61077 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2D3P61077 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms