Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC21■□□□□ 0.95
CDC34P49427 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC34P49427 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC34P49427 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC34P49427 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDC34P49427 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.98■□□□□ 0.95
CDC34P49427 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC34P49427 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDC34P49427 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CDC34P49427 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC34P49427 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC34P49427 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC34P49427 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.95■□□□□ 0.94
CDC34P49427 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.95■□□□□ 0.94
CDC34P49427 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC34P49427 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDC34P49427 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC34P49427 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.95■□□□□ 0.94
CDC34P49427 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDC34P49427 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDC34P49427 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CDC34P49427 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CDC34P49427 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDC34P49427 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC34P49427 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CDC34P49427 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC34P49427 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
CDC34P49427 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDC34P49427 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC34P49427 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC34P49427 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC34P49427 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CDC34P49427 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDC34P49427 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CDC34P49427 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC34P49427 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CDC34P49427 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC34P49427 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC34P49427 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.87■□□□□ 0.93
CDC34P49427 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC34P49427 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC34P49427 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC34P49427 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC34P49427 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC34P49427 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC34P49427 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.85■□□□□ 0.93
CDC34P49427 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.84■□□□□ 0.93
CDC34P49427 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC34P49427 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC34P49427 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC34P49427 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC34P49427 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDC34P49427 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CDC34P49427 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.81■□□□□ 0.92
CDC34P49427 AL135925.1-201ENST00000605920 1701 ntBASIC20.81■□□□□ 0.92
CDC34P49427 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC34P49427 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDC34P49427 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC34P49427 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC34P49427 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC34P49427 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC34P49427 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC34P49427 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDC34P49427 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.76■□□□□ 0.91
CDC34P49427 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.75■□□□□ 0.91
CDC34P49427 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDC34P49427 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC34P49427 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CDC34P49427 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC34P49427 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC34P49427 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC34P49427 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC34P49427 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC34P49427 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDC34P49427 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CDC34P49427 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC34P49427 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.7■□□□□ 0.9
CDC34P49427 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC34P49427 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC34P49427 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC34P49427 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC34P49427 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC34P49427 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDC34P49427 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.68■□□□□ 0.9
CDC34P49427 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC34P49427 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CDC34P49427 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDC34P49427 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDC34P49427 AL121749.1-202ENST00000609313 2153 ntBASIC20.67■□□□□ 0.9
CDC34P49427 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDC34P49427 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDC34P49427 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.66■□□□□ 0.9
CDC34P49427 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC34P49427 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.66■□□□□ 0.9
CDC34P49427 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC34P49427 DRD5P2-201ENST00000421395 2012 ntBASIC20.65■□□□□ 0.9
CDC34P49427 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CDC34P49427 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
CDC34P49427 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDC34P49427 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms