Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6DO43924 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PDE6DO43924 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6DO43924 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDE6DO43924 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PDE6DO43924 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PDE6DO43924 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
PDE6DO43924 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PDE6DO43924 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6DO43924 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6DO43924 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDE6DO43924 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.69■□□□□ 0.9
PDE6DO43924 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PDE6DO43924 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6DO43924 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6DO43924 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6DO43924 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.68■□□□□ 0.9
PDE6DO43924 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6DO43924 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.67■□□□□ 0.9
PDE6DO43924 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6DO43924 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6DO43924 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6DO43924 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6DO43924 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6DO43924 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PDE6DO43924 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6DO43924 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6DO43924 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.65■□□□□ 0.9
PDE6DO43924 AC015813.7-201ENST00000623294 581 ntBASIC20.65■□□□□ 0.9
PDE6DO43924 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6DO43924 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.64■□□□□ 0.89
PDE6DO43924 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6DO43924 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6DO43924 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6DO43924 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6DO43924 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6DO43924 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6DO43924 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6DO43924 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PDE6DO43924 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6DO43924 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6DO43924 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6DO43924 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6DO43924 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6DO43924 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PDE6DO43924 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.58■□□□□ 0.88
PDE6DO43924 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDE6DO43924 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6DO43924 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6DO43924 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6DO43924 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6DO43924 AL121749.1-202ENST00000609313 2153 ntBASIC20.56■□□□□ 0.88
PDE6DO43924 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.56■□□□□ 0.88
PDE6DO43924 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6DO43924 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6DO43924 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6DO43924 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6DO43924 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PDE6DO43924 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6DO43924 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6DO43924 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6DO43924 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6DO43924 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6DO43924 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PDE6DO43924 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.52■□□□□ 0.88
PDE6DO43924 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
PDE6DO43924 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6DO43924 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDE6DO43924 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6DO43924 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6DO43924 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.5■□□□□ 0.87
PDE6DO43924 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6DO43924 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6DO43924 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.49■□□□□ 0.87
PDE6DO43924 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.49■□□□□ 0.87
PDE6DO43924 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PDE6DO43924 AL135925.1-201ENST00000605920 1701 ntBASIC20.48■□□□□ 0.87
PDE6DO43924 AC135731.1-201ENST00000569415 2548 ntBASIC20.48■□□□□ 0.87
PDE6DO43924 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6DO43924 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.47■□□□□ 0.87
PDE6DO43924 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6DO43924 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6DO43924 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6DO43924 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6DO43924 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6DO43924 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.45■□□□□ 0.86
PDE6DO43924 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.44■□□□□ 0.86
PDE6DO43924 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PDE6DO43924 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE6DO43924 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE6DO43924 DRD5P2-201ENST00000421395 2012 ntBASIC20.43■□□□□ 0.86
PDE6DO43924 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDE6DO43924 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDE6DO43924 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDE6DO43924 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PDE6DO43924 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6DO43924 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PDE6DO43924 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6DO43924 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6DO43924 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms